RNA–Protein interactions for RNA: ENST00000462482.1

SKA3-204, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 750 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-204ENST00000462482 STMN3Q9NZ72 180 aa14.6□□□□□ -0.07
SKA3-204ENST00000462482 ABI3Q9P2A4 366 aa14.6□□□□□ -0.07
SKA3-204ENST00000462482 GALPQ9UBC7 116 aa14.6□□□□□ -0.07
SKA3-204ENST00000462482 COMMD10Q9Y6G5 202 aa14.6□□□□□ -0.07
SKA3-204ENST00000462482 LOC102723996A0A087X1L8 192 aa14.59□□□□□ -0.07
SKA3-204ENST00000462482 TRGV8A0A0C4DH27 118 aa14.59□□□□□ -0.07
SKA3-204ENST00000462482 IGKV1-8A0A0C4DH67 115 aa14.59□□□□□ -0.07
SKA3-204ENST00000462482 FAM237BA0A1B0GVD1 139 aa14.59□□□□□ -0.07
SKA3-204ENST00000462482 OR5H15A6NDH6 313 aa14.59□□□□□ -0.07
SKA3-204ENST00000462482 SDR42E2A6NKP2 422 aa14.59□□□□□ -0.07
SKA3-204ENST00000462482 A8MUI8 341 aa14.59□□□□□ -0.07
SKA3-204ENST00000462482 H0YIG0 161 aa14.59□□□□□ -0.07
SKA3-204ENST00000462482 PRAMEF2O60811 474 aa14.59□□□□□ -0.07
SKA3-204ENST00000462482 WDPCPO95876 746 aa14.59□□□□□ -0.07
SKA3-204ENST00000462482 F10P00742 488 aa14.59□□□□□ -0.07
SKA3-204ENST00000462482 CYC1P08574 325 aa14.59□□□□□ -0.07
SKA3-204ENST00000462482 CCDC175P0C221 793 aa14.59□□□□□ -0.07
SKA3-204ENST00000462482 MLNP12872 115 aa14.59□□□□□ -0.07
SKA3-204ENST00000462482 TNFRSF8P28908 595 aa14.59□□□□□ -0.07
SKA3-204ENST00000462482 CLCN7P51798 805 aa14.59□□□□□ -0.07
SKA3-204ENST00000462482 RPS15AP62244 130 aaKnown RBP14.59□□□□□ -0.07
SKA3-204ENST00000462482 ZNF33BQ06732 778 aa14.59□□□□□ -0.07
SKA3-204ENST00000462482 KCNJ11Q14654 390 aa14.59□□□□□ -0.07
SKA3-204ENST00000462482 PCOLCEQ15113 449 aa14.59□□□□□ -0.07
SKA3-204ENST00000462482 MINDY4Q4G0A6 757 aa14.59□□□□□ -0.07
SKA3-204ENST00000462482 TMEM205Q6UW68 189 aa14.59□□□□□ -0.07
SKA3-204ENST00000462482 ZC3H7AQ8IWR0 971 aaKnown RBP14.59□□□□□ -0.07
SKA3-204ENST00000462482 PALM2Q8IXS6 379 aa14.59□□□□□ -0.07
SKA3-204ENST00000462482 LMNTD2Q8IXW0 634 aa14.59□□□□□ -0.07
SKA3-204ENST00000462482 TRIM58Q8NG06 486 aa14.59□□□□□ -0.07
SKA3-204ENST00000462482 CALML6Q8TD86 181 aa14.59□□□□□ -0.07
SKA3-204ENST00000462482 ASB11Q8WXH4 323 aa14.59□□□□□ -0.07
SKA3-204ENST00000462482 PCBD2Q9H0N5 130 aa14.59□□□□□ -0.07
SKA3-204ENST00000462482 XAB2Q9HCS7 855 aaKnown RBP14.59□□□□□ -0.07
SKA3-204ENST00000462482 CCDC177Q9NQR7 707 aaPredicted RBP14.59□□□□□ -0.07
SKA3-204ENST00000462482 TMEM184CQ9NVA4 438 aa14.59□□□□□ -0.07
SKA3-204ENST00000462482 SEC14L3Q9UDX4 400 aa14.59□□□□□ -0.07
SKA3-204ENST00000462482 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP14.58□□□□□ -0.08
SKA3-204ENST00000462482 TCRBV7S3A2A0A539 114 aa14.58□□□□□ -0.08
SKA3-204ENST00000462482 PABPN1LA6NDY0 278 aaKnown RBP14.58□□□□□ -0.08
SKA3-204ENST00000462482 H7BY64 318 aa14.58□□□□□ -0.08
SKA3-204ENST00000462482 HAT1O14929 419 aa14.58□□□□□ -0.08
SKA3-204ENST00000462482 FOXS1O43638 330 aa14.58□□□□□ -0.08
SKA3-204ENST00000462482 AVILO75366 819 aa14.58□□□□□ -0.08
SKA3-204ENST00000462482 UNC5CO95185 931 aa14.58□□□□□ -0.08
SKA3-204ENST00000462482 MLYCDO95822 493 aa14.58□□□□□ -0.08
SKA3-204ENST00000462482 ITGAMP11215 1152 aa14.58□□□□□ -0.08
SKA3-204ENST00000462482 MAT1AQ00266 395 aaKnown RBP14.58□□□□□ -0.08
SKA3-204ENST00000462482 CUL1Q13616 776 aa14.58□□□□□ -0.08
SKA3-204ENST00000462482 PTK6Q13882 451 aa14.58□□□□□ -0.08
SKA3-204ENST00000462482 SYT16Q17RD7 645 aa14.58□□□□□ -0.08
SKA3-204ENST00000462482 BTBD16Q32M84 506 aa14.58□□□□□ -0.08
SKA3-204ENST00000462482 ZNF324BQ6AW86 544 aaPredicted RBP14.58□□□□□ -0.08
SKA3-204ENST00000462482 LRRC8EQ6NSJ5 796 aa14.58□□□□□ -0.08
SKA3-204ENST00000462482 UBE2R2Q712K3 238 aaPredicted RBP14.58□□□□□ -0.08
SKA3-204ENST00000462482 PLD3Q8IV08 490 aa14.58□□□□□ -0.08
SKA3-204ENST00000462482 GABPB2Q8TAK5 448 aaPredicted RBP14.58□□□□□ -0.08
SKA3-204ENST00000462482 THAP11Q96EK4 314 aa14.58□□□□□ -0.08
SKA3-204ENST00000462482 ZNF354BQ96LW1 612 aa14.58□□□□□ -0.08
SKA3-204ENST00000462482 PRAP1Q96NZ9 151 aa14.58□□□□□ -0.08
SKA3-204ENST00000462482 TAAR6Q96RI8 345 aa14.58□□□□□ -0.08
SKA3-204ENST00000462482 FBXO6Q9NRD1 293 aaPredicted RBP14.58□□□□□ -0.08
SKA3-204ENST00000462482 DHRS7Q9Y394 339 aa14.58□□□□□ -0.08
SKA3-204ENST00000462482 MAD1L1Q9Y6D9 718 aa14.58□□□□□ -0.08
SKA3-204ENST00000462482 GFYI3L273 518 aa14.57□□□□□ -0.08
SKA3-204ENST00000462482 KIF5CO60282 957 aa14.57□□□□□ -0.08
SKA3-204ENST00000462482 SEC24DO94855 1032 aaPredicted RBP14.57□□□□□ -0.08
SKA3-204ENST00000462482 NSA2O95478 260 aaKnown RBP14.57□□□□□ -0.08
SKA3-204ENST00000462482 KRT14P02533 472 aa14.57□□□□□ -0.08
SKA3-204ENST00000462482 CELA2AP08217 269 aa14.57□□□□□ -0.08
SKA3-204ENST00000462482 GRK3P35626 688 aa14.57□□□□□ -0.08
SKA3-204ENST00000462482 SKIV2L2P42285 1042 aaKnown RBP14.57□□□□□ -0.08
SKA3-204ENST00000462482 MAGEA6P43360 314 aa14.57□□□□□ -0.08
SKA3-204ENST00000462482 TDGF1P3P51864 188 aa14.57□□□□□ -0.08
SKA3-204ENST00000462482 CTBP1Q13363 440 aa14.57□□□□□ -0.08
SKA3-204ENST00000462482 ART3Q13508 389 aa14.57□□□□□ -0.08
SKA3-204ENST00000462482 UGT3A1Q6NUS8 523 aa14.57□□□□□ -0.08
SKA3-204ENST00000462482 CPEB2Q7Z5Q1 589 aaKnown RBP14.57□□□□□ -0.08
SKA3-204ENST00000462482 CAMKVQ8NCB2 501 aa14.57□□□□□ -0.08
SKA3-204ENST00000462482 OR9A4Q8NGU2 314 aa14.57□□□□□ -0.08
SKA3-204ENST00000462482 FAM129AQ9BZQ8 928 aa14.57□□□□□ -0.08
SKA3-204ENST00000462482 VN1R1Q9GZP7 353 aa14.57□□□□□ -0.08
SKA3-204ENST00000462482 ANKHQ9HCJ1 492 aa14.57□□□□□ -0.08
SKA3-204ENST00000462482 C20orf96Q9NUD7 363 aaPredicted RBP14.57□□□□□ -0.08
SKA3-204ENST00000462482 TRMT6Q9UJA5 497 aaKnown RBP14.57□□□□□ -0.08
SKA3-204ENST00000462482 EIF3FO00303 357 aaPredicted RBP14.56□□□□□ -0.08
SKA3-204ENST00000462482 CCL21O00585 134 aa14.56□□□□□ -0.08
SKA3-204ENST00000462482 P2RX6O15547 441 aa14.56□□□□□ -0.08
SKA3-204ENST00000462482 TTI1O43156 1089 aa14.56□□□□□ -0.08
SKA3-204ENST00000462482 NRDCO43847 1150 aa14.56□□□□□ -0.08
SKA3-204ENST00000462482 CXCR5P32302 372 aa14.56□□□□□ -0.08
SKA3-204ENST00000462482 XCR1P46094 333 aa14.56□□□□□ -0.08
SKA3-204ENST00000462482 RGS4P49798 205 aa14.56□□□□□ -0.08
SKA3-204ENST00000462482 AGTR2P50052 363 aa14.56□□□□□ -0.08
SKA3-204ENST00000462482 ACTN3Q08043 901 aaPredicted RBP14.56□□□□□ -0.08
SKA3-204ENST00000462482 PLAG1Q6DJT9 500 aa14.56□□□□□ -0.08
SKA3-204ENST00000462482 RPTNQ6XPR3 784 aa14.56□□□□□ -0.08
SKA3-204ENST00000462482 CAND1Q86VP6 1230 aaKnown RBP14.56□□□□□ -0.08
SKA3-204ENST00000462482 C17orf64Q86WR6 236 aa14.56□□□□□ -0.08
SKA3-204ENST00000462482 DENND6AQ8IWF6 608 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms