RNA–Protein interactions for RNA: ENST00000461522.1

UBA3-204, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 2

Gene UBA3, Length 693 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-204ENST00000461522 HADHAP40939 763 aa3.78□□□□□ -1.8
UBA3-204ENST00000461522 MMP15P51511 669 aa3.78□□□□□ -1.8
UBA3-204ENST00000461522 KLRC3Q07444 240 aa3.78□□□□□ -1.8
UBA3-204ENST00000461522 SPP2Q13103 211 aa3.78□□□□□ -1.8
UBA3-204ENST00000461522 TMEM187Q14656 261 aa3.78□□□□□ -1.8
UBA3-204ENST00000461522 COG2Q14746 738 aa3.78□□□□□ -1.8
UBA3-204ENST00000461522 SLC1A5Q15758 541 aa3.78□□□□□ -1.8
UBA3-204ENST00000461522 SHROOM1Q2M3G4 852 aaPredicted RBP3.78□□□□□ -1.8
UBA3-204ENST00000461522 WSCD2Q2TBF2 565 aa3.78□□□□□ -1.8
UBA3-204ENST00000461522 GPR139Q6DWJ6 353 aa3.78□□□□□ -1.8
UBA3-204ENST00000461522 SLC30A6Q6NXT4 461 aa3.78□□□□□ -1.8
UBA3-204ENST00000461522 ALKBH5Q6P6C2 394 aaKnown RBP3.78□□□□□ -1.8
UBA3-204ENST00000461522 CYP20A1Q6UW02 462 aa3.78□□□□□ -1.8
UBA3-204ENST00000461522 ANGPTL8Q6UXH0 198 aa3.78□□□□□ -1.8
UBA3-204ENST00000461522 GBP6Q6ZN66 633 aa3.78□□□□□ -1.8
UBA3-204ENST00000461522 STOX1Q6ZVD7 989 aa3.78□□□□□ -1.8
UBA3-204ENST00000461522 CCDC186Q7Z3E2 898 aa3.78□□□□□ -1.8
UBA3-204ENST00000461522 R3HCC1LQ7Z5L2 792 aaKnown RBP3.78□□□□□ -1.8
UBA3-204ENST00000461522 ZER1Q7Z7L7 766 aa3.78□□□□□ -1.8
UBA3-204ENST00000461522 TBC1D10CQ8IV04 446 aa3.78□□□□□ -1.8
UBA3-204ENST00000461522 UNC45BQ8IWX7 931 aa3.78□□□□□ -1.8
UBA3-204ENST00000461522 DCLK2Q8N568 766 aa3.78□□□□□ -1.8
UBA3-204ENST00000461522 ZNF540Q8NDQ6 660 aa3.78□□□□□ -1.8
UBA3-204ENST00000461522 OR52K2Q8NGK3 314 aa3.78□□□□□ -1.8
UBA3-204ENST00000461522 GOT1L1Q8NHS2 421 aaPredicted RBP3.78□□□□□ -1.8
UBA3-204ENST00000461522 FBXO30Q8TB52 745 aa3.78□□□□□ -1.8
UBA3-204ENST00000461522 SUN5Q8TC36 379 aa3.78□□□□□ -1.8
UBA3-204ENST00000461522 CHURC1Q8WUH1 139 aa3.78□□□□□ -1.8
UBA3-204ENST00000461522 UCMAQ8WVF2 138 aa3.78□□□□□ -1.8
UBA3-204ENST00000461522 SMPDL3BQ92485 455 aa3.78□□□□□ -1.8
UBA3-204ENST00000461522 ZKSCAN4Q969J2 545 aaPredicted RBP3.78□□□□□ -1.8
UBA3-204ENST00000461522 ZNF653Q96CK0 615 aa3.78□□□□□ -1.8
UBA3-204ENST00000461522 OPTNQ96CV9 577 aa3.78□□□□□ -1.8
UBA3-204ENST00000461522 DYNLL2Q96FJ2 89 aa3.78□□□□□ -1.8
UBA3-204ENST00000461522 PERPQ96FX8 193 aa3.78□□□□□ -1.8
UBA3-204ENST00000461522 TIGD1Q96MW7 591 aa3.78□□□□□ -1.8
UBA3-204ENST00000461522 GFI1Q99684 422 aa3.78□□□□□ -1.8
UBA3-204ENST00000461522 SLF1Q9BQI6 1058 aa3.78□□□□□ -1.8
UBA3-204ENST00000461522 GPATCH1Q9BRR8 931 aaKnown RBP3.78□□□□□ -1.8
UBA3-204ENST00000461522 TEX13BQ9BXU2 312 aa3.78□□□□□ -1.8
UBA3-204ENST00000461522 SLC7A5P2Q9GIP4 190 aa3.78□□□□□ -1.8
UBA3-204ENST00000461522 VCPKMTQ9H867 229 aa3.78□□□□□ -1.8
UBA3-204ENST00000461522 POLR1BQ9H9Y6 1135 aa3.78□□□□□ -1.8
UBA3-204ENST00000461522 PREBQ9HCU5 417 aa3.78□□□□□ -1.8
UBA3-204ENST00000461522 SIX2Q9NPC8 291 aa3.78□□□□□ -1.8
UBA3-204ENST00000461522 TRPV5Q9NQA5 729 aa3.78□□□□□ -1.8
UBA3-204ENST00000461522 OLA1Q9NTK5 396 aaKnown RBP3.78□□□□□ -1.8
UBA3-204ENST00000461522 AASSQ9UDR5 926 aa3.78□□□□□ -1.8
UBA3-204ENST00000461522 HPCAL4Q9UM19 191 aa3.78□□□□□ -1.8
UBA3-204ENST00000461522 NOSIPQ9Y314 301 aaKnown RBP3.78□□□□□ -1.8
UBA3-204ENST00000461522 NID2Q14112 1375 aa3.77□□□□□ -1.81
UBA3-204ENST00000461522 ZNF646O15015 1829 aaPredicted RBP3.77□□□□□ -1.81
UBA3-204ENST00000461522 DOCK2Q92608 1830 aa3.77□□□□□ -1.81
UBA3-204ENST00000461522 SSC5DA1L4H1 1573 aa3.77□□□□□ -1.81
UBA3-204ENST00000461522 A0A1W2PPH5 198 aa3.77□□□□□ -1.81
UBA3-204ENST00000461522 SH2B2O14492 632 aaPredicted RBP3.77□□□□□ -1.81
UBA3-204ENST00000461522 ARHGEF9O43307 516 aa3.77□□□□□ -1.81
UBA3-204ENST00000461522 PLPP2O43688 288 aa3.77□□□□□ -1.81
UBA3-204ENST00000461522 ZBTB14O43829 449 aa3.77□□□□□ -1.81
UBA3-204ENST00000461522 TSC22D2O75157 780 aa3.77□□□□□ -1.81
UBA3-204ENST00000461522 STAM2O75886 525 aa3.77□□□□□ -1.81
UBA3-204ENST00000461522 DDHD2O94830 711 aa3.77□□□□□ -1.81
UBA3-204ENST00000461522 GOSR1O95249 250 aa3.77□□□□□ -1.81
UBA3-204ENST00000461522 BMP10O95393 424 aa3.77□□□□□ -1.81
UBA3-204ENST00000461522 STAMBPO95630 424 aa3.77□□□□□ -1.81
UBA3-204ENST00000461522 TBX18O95935 607 aa3.77□□□□□ -1.81
UBA3-204ENST00000461522 PLA2G4BP0C869 781 aa3.77□□□□□ -1.81
UBA3-204ENST00000461522 PDHBP11177 359 aa3.77□□□□□ -1.81
UBA3-204ENST00000461522 SELLP14151 372 aa3.77□□□□□ -1.81
UBA3-204ENST00000461522 CAPN2P17655 700 aa3.77□□□□□ -1.81
UBA3-204ENST00000461522 CASTP20810 708 aaKnown RBP3.77□□□□□ -1.81
UBA3-204ENST00000461522 BSGP35613 385 aa3.77□□□□□ -1.81
UBA3-204ENST00000461522 RGS2P41220 211 aa3.77□□□□□ -1.81
UBA3-204ENST00000461522 MTHFRP42898 656 aa3.77□□□□□ -1.81
UBA3-204ENST00000461522 SLC1A4P43007 532 aa3.77□□□□□ -1.81
UBA3-204ENST00000461522 PSMC4P43686 418 aa3.77□□□□□ -1.81
UBA3-204ENST00000461522 ASMTP46597 345 aa3.77□□□□□ -1.81
UBA3-204ENST00000461522 HAND2P61296 217 aa3.77□□□□□ -1.81
UBA3-204ENST00000461522 IL1RL1Q01638 556 aa3.77□□□□□ -1.81
UBA3-204ENST00000461522 IKQ13123 557 aaPredicted RBP3.77□□□□□ -1.81
UBA3-204ENST00000461522 TUBB2AQ13885 445 aa3.77□□□□□ -1.81
UBA3-204ENST00000461522 PPA1Q15181 289 aa3.77□□□□□ -1.81
UBA3-204ENST00000461522 PPP1R7Q15435 360 aa3.77□□□□□ -1.81
UBA3-204ENST00000461522 NDUFAF5Q5TEU4 345 aa3.77□□□□□ -1.81
UBA3-204ENST00000461522 FAM47EQ6ZV65 393 aa3.77□□□□□ -1.81
UBA3-204ENST00000461522 DNAJB7Q7Z6W7 309 aaPredicted RBP3.77□□□□□ -1.81
UBA3-204ENST00000461522 GTSCR1Q86UQ5 136 aa3.77□□□□□ -1.81
UBA3-204ENST00000461522 LRRC49Q8IUZ0 686 aa3.77□□□□□ -1.81
UBA3-204ENST00000461522 ZNF619Q8N2I2 560 aa3.77□□□□□ -1.81
UBA3-204ENST00000461522 LRRC43Q8N309 656 aa3.77□□□□□ -1.81
UBA3-204ENST00000461522 AVL9Q8NBF6 648 aa3.77□□□□□ -1.81
UBA3-204ENST00000461522 DDHD1Q8NEL9 900 aa3.77□□□□□ -1.81
UBA3-204ENST00000461522 TRPC4APQ8TEL6 797 aa3.77□□□□□ -1.81
UBA3-204ENST00000461522 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP3.77□□□□□ -1.81
UBA3-204ENST00000461522 CAPNS2Q96L46 248 aa3.77□□□□□ -1.81
UBA3-204ENST00000461522 C1orf74Q96LT6 269 aa3.77□□□□□ -1.81
UBA3-204ENST00000461522 LINC00479Q96M42 142 aa3.77□□□□□ -1.81
UBA3-204ENST00000461522 CCDC43Q96MW1 224 aaKnown RBP3.77□□□□□ -1.81
UBA3-204ENST00000461522 ATOH8Q96SQ7 321 aa3.77□□□□□ -1.81
UBA3-204ENST00000461522 PYGO2Q9BRQ0 406 aa3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms