RNA–Protein interactions for RNA: ENST00000461507.5

FDPS-204, Transcript of farnesyl diphosphate synthase, human

TSL 2

Gene FDPS, Length 1,022 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FDPS-204	ENST00000461507	NDC1	Q9BTX1	674 aa		12.16	□□□□□ -0.46
FDPS-204	ENST00000461507	ACSS3	Q9H6R3	686 aa		12.16	□□□□□ -0.46
FDPS-204	ENST00000461507	SLC6A20	Q9NP91	592 aa		12.16	□□□□□ -0.46
FDPS-204	ENST00000461507	EURL	Q9NYK6	297 aa		12.16	□□□□□ -0.46
FDPS-204	ENST00000461507	IKZF3	Q9UKT9	509 aa		12.16	□□□□□ -0.46
FDPS-204	ENST00000461507	SRPK3	Q9UPE1	567 aa		12.16	□□□□□ -0.46
FDPS-204	ENST00000461507	PADI2	Q9Y2J8	665 aa		12.16	□□□□□ -0.46
FDPS-204	ENST00000461507	PRICKLE3	O43900	615 aa	Predicted RBP	12.15	□□□□□ -0.46
FDPS-204	ENST00000461507	ONECUT2	O95948	504 aa		12.15	□□□□□ -0.46
FDPS-204	ENST00000461507	ANXA5	P08758	320 aa		12.15	□□□□□ -0.46
FDPS-204	ENST00000461507	ERG	P11308	486 aa		12.15	□□□□□ -0.46
FDPS-204	ENST00000461507	AGXT	P21549	392 aa		12.15	□□□□□ -0.46
FDPS-204	ENST00000461507	ALAS2	P22557	587 aa		12.15	□□□□□ -0.46
FDPS-204	ENST00000461507	GMPR	P36959	345 aa		12.15	□□□□□ -0.46
FDPS-204	ENST00000461507	AP1S2	P56377	157 aa		12.15	□□□□□ -0.46
FDPS-204	ENST00000461507	SLC9A5	Q14940	896 aa		12.15	□□□□□ -0.46
FDPS-204	ENST00000461507	MRPL14	Q6P1L8	145 aa	Known RBP	12.15	□□□□□ -0.46
FDPS-204	ENST00000461507	TLDC1	Q6P9B6	456 aa		12.15	□□□□□ -0.46
FDPS-204	ENST00000461507	MRGPRE	Q86SM8	312 aa		12.15	□□□□□ -0.46
FDPS-204	ENST00000461507	METTL27	Q8N6F8	245 aa	Predicted RBP	12.15	□□□□□ -0.46
FDPS-204	ENST00000461507	UBLCP1	Q8WVY7	318 aa	Predicted RBP	12.15	□□□□□ -0.46
FDPS-204	ENST00000461507	RERG	Q96A58	199 aa	Predicted RBP	12.15	□□□□□ -0.46
FDPS-204	ENST00000461507	ZUFSP	Q96AP4	578 aa		12.15	□□□□□ -0.46
FDPS-204	ENST00000461507	IP6K3	Q96PC2	410 aa		12.15	□□□□□ -0.46
FDPS-204	ENST00000461507	PAFAH2	Q99487	392 aa		12.15	□□□□□ -0.46
FDPS-204	ENST00000461507	VPS11	Q9H270	941 aa		12.15	□□□□□ -0.46
FDPS-204	ENST00000461507	CUEDC1	Q9NWM3	386 aa	Predicted RBP	12.15	□□□□□ -0.46
FDPS-204	ENST00000461507	WWOX	Q9NZC7	414 aa		12.15	□□□□□ -0.46
FDPS-204	ENST00000461507	CD274	Q9NZQ7	290 aa		12.15	□□□□□ -0.46
FDPS-204	ENST00000461507	ANKMY1	Q9P2S6	941 aa		12.15	□□□□□ -0.46
FDPS-204	ENST00000461507	DHCR7	Q9UBM7	475 aa	Known RBP	12.15	□□□□□ -0.46
FDPS-204	ENST00000461507	NOL12	Q9UGY1	213 aa	Known RBP eCLIP	12.15	□□□□□ -0.46
FDPS-204	ENST00000461507	GPN3	Q9UHW5	284 aa	Predicted RBP	12.15	□□□□□ -0.46
FDPS-204	ENST00000461507	RNF112	Q9ULX5	631 aa		12.15	□□□□□ -0.46
FDPS-204	ENST00000461507	DYRK1B	Q9Y463	629 aa		12.15	□□□□□ -0.46
FDPS-204	ENST00000461507	ZNF451	Q9Y4E5	1061 aa		12.15	□□□□□ -0.46
FDPS-204	ENST00000461507		V9GYY5	206 aa	Predicted RBP	12.15	□□□□□ -0.46
FDPS-204	ENST00000461507	HIVEP3	Q5T1R4	2406 aa		12.14	□□□□□ -0.47
FDPS-204	ENST00000461507	SUPT3H	B4E1H0	165 aa		12.14	□□□□□ -0.47
FDPS-204	ENST00000461507	TARM1	B6A8C7	271 aa		12.14	□□□□□ -0.47
FDPS-204	ENST00000461507		H7BY64	318 aa		12.14	□□□□□ -0.47
FDPS-204	ENST00000461507	CNOT3	O75175	753 aa	Known RBP	12.14	□□□□□ -0.47
FDPS-204	ENST00000461507	SUPT3H	O75486	399 aa		12.14	□□□□□ -0.47
FDPS-204	ENST00000461507	SLU7	O95391	586 aa	Known RBP	12.14	□□□□□ -0.47
FDPS-204	ENST00000461507	C1QA	P02745	245 aa		12.14	□□□□□ -0.47
FDPS-204	ENST00000461507	STATH	P02808	62 aa		12.14	□□□□□ -0.47
FDPS-204	ENST00000461507	CTSB	P07858	339 aa		12.14	□□□□□ -0.47
FDPS-204	ENST00000461507	CD63	P08962	238 aa		12.14	□□□□□ -0.47
FDPS-204	ENST00000461507	FAM153B	P0C7A2	387 aa		12.14	□□□□□ -0.47
FDPS-204	ENST00000461507	CDH1	P12830	882 aa		12.14	□□□□□ -0.47
FDPS-204	ENST00000461507	CCND1	P24385	295 aa		12.14	□□□□□ -0.47
FDPS-204	ENST00000461507	CRABP2	P29373	138 aa		12.14	□□□□□ -0.47
FDPS-204	ENST00000461507	TYK2	P29597	1187 aa		12.14	□□□□□ -0.47
FDPS-204	ENST00000461507	SERPINB8	P50452	374 aa		12.14	□□□□□ -0.47
FDPS-204	ENST00000461507	CCL11	P51671	97 aa		12.14	□□□□□ -0.47
FDPS-204	ENST00000461507	RRAD	P55042	308 aa		12.14	□□□□□ -0.47
FDPS-204	ENST00000461507	MLLT10	P55197	1068 aa		12.14	□□□□□ -0.47
FDPS-204	ENST00000461507	ATP6V0D1	P61421	351 aa		12.14	□□□□□ -0.47
FDPS-204	ENST00000461507	ABAT	P80404	500 aa		12.14	□□□□□ -0.47
FDPS-204	ENST00000461507	PRDX1	Q06830	199 aa	Known RBP	12.14	□□□□□ -0.47
FDPS-204	ENST00000461507	ATP1A4	Q13733	1029 aa		12.14	□□□□□ -0.47
FDPS-204	ENST00000461507	FAM153C	Q494X1	144 aa		12.14	□□□□□ -0.47
FDPS-204	ENST00000461507	FAM69B	Q5VUD6	431 aa		12.14	□□□□□ -0.47
FDPS-204	ENST00000461507	SBSN	Q6UWP8	590 aa		12.14	□□□□□ -0.47
FDPS-204	ENST00000461507	TTLL10	Q6ZVT0	673 aa		12.14	□□□□□ -0.47
FDPS-204	ENST00000461507	TRMT10C	Q7L0Y3	403 aa	Known RBP	12.14	□□□□□ -0.47
FDPS-204	ENST00000461507	ATCAY	Q86WG3	371 aa		12.14	□□□□□ -0.47
FDPS-204	ENST00000461507	GPSM1	Q86YR5	675 aa		12.14	□□□□□ -0.47
FDPS-204	ENST00000461507	RELL1	Q8IUW5	271 aa		12.14	□□□□□ -0.47
FDPS-204	ENST00000461507	PLD3	Q8IV08	490 aa		12.14	□□□□□ -0.47
FDPS-204	ENST00000461507	GALNT11	Q8NCW6	608 aa		12.14	□□□□□ -0.47
FDPS-204	ENST00000461507	CABS1	Q96KC9	395 aa		12.14	□□□□□ -0.47
FDPS-204	ENST00000461507	TSNARE1	Q96NA8	513 aa		12.14	□□□□□ -0.47
FDPS-204	ENST00000461507	ZNF285	Q96NJ3	590 aa		12.14	□□□□□ -0.47
FDPS-204	ENST00000461507	PRAP1	Q96NZ9	151 aa		12.14	□□□□□ -0.47
FDPS-204	ENST00000461507	SMAD5	Q99717	465 aa	Known RBP	12.14	□□□□□ -0.47
FDPS-204	ENST00000461507	ZFYVE21	Q9BQ24	234 aa		12.14	□□□□□ -0.47
FDPS-204	ENST00000461507	NUDT9	Q9BW91	350 aa		12.14	□□□□□ -0.47
FDPS-204	ENST00000461507	DERL2	Q9GZP9	239 aa		12.14	□□□□□ -0.47
FDPS-204	ENST00000461507	PCBD2	Q9H0N5	130 aa		12.14	□□□□□ -0.47
FDPS-204	ENST00000461507	ALG9	Q9H6U8	611 aa		12.14	□□□□□ -0.47
FDPS-204	ENST00000461507	SNX15	Q9NRS6	342 aa		12.14	□□□□□ -0.47
FDPS-204	ENST00000461507	OARD1	Q9Y530	152 aa		12.14	□□□□□ -0.47
FDPS-204	ENST00000461507	KLK4	Q9Y5K2	254 aa		12.14	□□□□□ -0.47
FDPS-204	ENST00000461507		A0A087X1B8	175 aa		12.13	□□□□□ -0.47
FDPS-204	ENST00000461507	HAT1	O14929	419 aa		12.13	□□□□□ -0.47
FDPS-204	ENST00000461507	CTSV	O60911	334 aa		12.13	□□□□□ -0.47
FDPS-204	ENST00000461507	WDR47	O94967	919 aa		12.13	□□□□□ -0.47
FDPS-204	ENST00000461507	TFEB	P19484	476 aa		12.13	□□□□□ -0.47
FDPS-204	ENST00000461507	GRK3	P35626	688 aa		12.13	□□□□□ -0.47
FDPS-204	ENST00000461507	GLRB	P48167	497 aa		12.13	□□□□□ -0.47
FDPS-204	ENST00000461507	DCD	P81605	110 aa	Known RBP	12.13	□□□□□ -0.47
FDPS-204	ENST00000461507	IRF9	Q00978	393 aa		12.13	□□□□□ -0.47
FDPS-204	ENST00000461507	GRM7	Q14831	915 aa		12.13	□□□□□ -0.47
FDPS-204	ENST00000461507	ZKSCAN8	Q15776	578 aa	Predicted RBP	12.13	□□□□□ -0.47
FDPS-204	ENST00000461507	NADK2	Q4G0N4	442 aa		12.13	□□□□□ -0.47
FDPS-204	ENST00000461507	FBXO48	Q5FWF7	155 aa		12.13	□□□□□ -0.47
FDPS-204	ENST00000461507	TCTE1	Q5JU00	501 aa		12.13	□□□□□ -0.47
FDPS-204	ENST00000461507	WASHC2D	Q5SRD0	308 aa		12.13	□□□□□ -0.47
FDPS-204	ENST00000461507	MLIP	Q5VWP3	458 aa		12.13	□□□□□ -0.47

Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms