RNA–Protein interactions for RNA: ENST00000461228.1

DNMT3A-207, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 5

Gene DNMT3A, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-207ENST00000461228 PRSS58Q8IYP2 241 aa13.77□□□□□ -0.21
DNMT3A-207ENST00000461228 ZNF295-AS1Q8N0V1 137 aa13.77□□□□□ -0.21
DNMT3A-207ENST00000461228 HORMAD2Q8N7B1 307 aa13.77□□□□□ -0.21
DNMT3A-207ENST00000461228 SKA2Q8WVK7 121 aaPredicted RBP13.77□□□□□ -0.21
DNMT3A-207ENST00000461228 METTL21AQ8WXB1 218 aa13.77□□□□□ -0.21
DNMT3A-207ENST00000461228 THAP11Q96EK4 314 aa13.77□□□□□ -0.21
DNMT3A-207ENST00000461228 MMABQ96EY8 250 aaPredicted RBP13.77□□□□□ -0.21
DNMT3A-207ENST00000461228 ZNF469Q96JG9 3925 aaPredicted RBP13.77□□□□□ -0.21
DNMT3A-207ENST00000461228 KIFC1Q9BW19 673 aa13.77□□□□□ -0.21
DNMT3A-207ENST00000461228 VN1R1Q9GZP7 353 aa13.77□□□□□ -0.21
DNMT3A-207ENST00000461228 LACRTQ9GZZ8 138 aa13.77□□□□□ -0.21
DNMT3A-207ENST00000461228 ENKD1Q9H0I2 346 aa13.77□□□□□ -0.21
DNMT3A-207ENST00000461228 TSPY26PQ9H489 355 aa13.77□□□□□ -0.21
DNMT3A-207ENST00000461228 GPAMQ9HCL2 828 aa13.77□□□□□ -0.21
DNMT3A-207ENST00000461228 MMP25Q9NPA2 562 aa13.77□□□□□ -0.21
DNMT3A-207ENST00000461228 RAB6BQ9NRW1 208 aa13.77□□□□□ -0.21
DNMT3A-207ENST00000461228 PLA2G3Q9NZ20 509 aa13.77□□□□□ -0.21
DNMT3A-207ENST00000461228 CIDEBQ9UHD4 219 aa13.77□□□□□ -0.21
DNMT3A-207ENST00000461228 DUSP10Q9Y6W6 482 aa13.77□□□□□ -0.21
DNMT3A-207ENST00000461228 ANKHD1Q8IWZ3 2542 aaKnown RBP13.77□□□□□ -0.21
DNMT3A-207ENST00000461228 SPG11Q96JI7 2443 aa13.76□□□□□ -0.21
DNMT3A-207ENST00000461228 SOWAHDA6NJG2 315 aa13.76□□□□□ -0.21
DNMT3A-207ENST00000461228 EIF3FO00303 357 aaPredicted RBP13.76□□□□□ -0.21
DNMT3A-207ENST00000461228 NDUFS3O75489 264 aa13.76□□□□□ -0.21
DNMT3A-207ENST00000461228 EIF2S1P05198 315 aaKnown RBP13.76□□□□□ -0.21
DNMT3A-207ENST00000461228 ATXN8OSP0DMR3 200 aa13.76□□□□□ -0.21
DNMT3A-207ENST00000461228 GRIA1P42261 906 aa13.76□□□□□ -0.21
DNMT3A-207ENST00000461228 EFNA3P52797 238 aa13.76□□□□□ -0.21
DNMT3A-207ENST00000461228 ACER2Q5QJU3 275 aa13.76□□□□□ -0.21
DNMT3A-207ENST00000461228 SIAH3Q8IW03 269 aa13.76□□□□□ -0.21
DNMT3A-207ENST00000461228 FAM98AQ8NCA5 519 aaKnown RBP13.76□□□□□ -0.21
DNMT3A-207ENST00000461228 M1APQ8TC57 530 aa13.76□□□□□ -0.21
DNMT3A-207ENST00000461228 MTFMTQ96DP5 389 aaKnown RBP13.76□□□□□ -0.21
DNMT3A-207ENST00000461228 OR1F2PQ96R84 312 aa13.76□□□□□ -0.21
DNMT3A-207ENST00000461228 SYNPO2LQ9H987 977 aa13.76□□□□□ -0.21
DNMT3A-207ENST00000461228 DRG1Q9Y295 367 aaKnown RBP13.76□□□□□ -0.21
DNMT3A-207ENST00000461228 MEMO1Q9Y316 297 aa13.76□□□□□ -0.21
DNMT3A-207ENST00000461228 HCFC1P51610 2035 aa13.75□□□□□ -0.21
DNMT3A-207ENST00000461228 A0A0U1RQJ8 604 aa13.75□□□□□ -0.21
DNMT3A-207ENST00000461228 E7ENX8 843 aa13.75□□□□□ -0.21
DNMT3A-207ENST00000461228 E9PLN8 166 aa13.75□□□□□ -0.21
DNMT3A-207ENST00000461228 FANCGO15287 622 aa13.75□□□□□ -0.21
DNMT3A-207ENST00000461228 TTI1O43156 1089 aa13.75□□□□□ -0.21
DNMT3A-207ENST00000461228 SLC16A8O95907 504 aa13.75□□□□□ -0.21
DNMT3A-207ENST00000461228 CELA2AP08217 269 aa13.75□□□□□ -0.21
DNMT3A-207ENST00000461228 ENO3P13929 434 aaPredicted RBP13.75□□□□□ -0.21
DNMT3A-207ENST00000461228 SKIV2L2P42285 1042 aaKnown RBP13.75□□□□□ -0.21
DNMT3A-207ENST00000461228 PNLIPRP1P54315 467 aa13.75□□□□□ -0.21
DNMT3A-207ENST00000461228 NAP1L1P55209 391 aaKnown RBP13.75□□□□□ -0.21
DNMT3A-207ENST00000461228 EIF3BP55884 814 aaKnown RBP13.75□□□□□ -0.21
DNMT3A-207ENST00000461228 RPS15AP62244 130 aaKnown RBP13.75□□□□□ -0.21
DNMT3A-207ENST00000461228 TAP2Q03519 686 aa13.75□□□□□ -0.21
DNMT3A-207ENST00000461228 TUBA3CQ13748 450 aa13.75□□□□□ -0.21
DNMT3A-207ENST00000461228 FASTKQ14296 549 aaKnown RBP13.75□□□□□ -0.21
DNMT3A-207ENST00000461228 C3AR1Q16581 482 aa13.75□□□□□ -0.21
DNMT3A-207ENST00000461228 MEP1AQ16819 746 aa13.75□□□□□ -0.21
DNMT3A-207ENST00000461228 TTLL9Q3SXZ7 439 aa13.75□□□□□ -0.21
DNMT3A-207ENST00000461228 KIAA0930Q6ICG6 404 aaPredicted RBP13.75□□□□□ -0.21
DNMT3A-207ENST00000461228 NIPAL1Q6NVV3 410 aa13.75□□□□□ -0.21
DNMT3A-207ENST00000461228 LRRC8BQ6P9F7 803 aa13.75□□□□□ -0.21
DNMT3A-207ENST00000461228 TUBA3EQ6PEY2 450 aa13.75□□□□□ -0.21
DNMT3A-207ENST00000461228 CPEB2Q7Z5Q1 589 aaKnown RBP13.75□□□□□ -0.21
DNMT3A-207ENST00000461228 SPPL2CQ8IUH8 684 aa13.75□□□□□ -0.21
DNMT3A-207ENST00000461228 ARMC10Q8N2F6 343 aa13.75□□□□□ -0.21
DNMT3A-207ENST00000461228 SLC5A8Q8N695 610 aa13.75□□□□□ -0.21
DNMT3A-207ENST00000461228 MCOLN3Q8TDD5 553 aa13.75□□□□□ -0.21
DNMT3A-207ENST00000461228 ATG4AQ8WYN0 398 aa13.75□□□□□ -0.21
DNMT3A-207ENST00000461228 KCNJ9Q92806 393 aa13.75□□□□□ -0.21
DNMT3A-207ENST00000461228 VKORC1Q9BQB6 163 aa13.75□□□□□ -0.21
DNMT3A-207ENST00000461228 TRIM51Q9BSJ1 452 aa13.75□□□□□ -0.21
DNMT3A-207ENST00000461228 TRIM45Q9H8W5 580 aaPredicted RBP13.75□□□□□ -0.21
DNMT3A-207ENST00000461228 CHRAC1Q9NRG0 131 aa13.75□□□□□ -0.21
DNMT3A-207ENST00000461228 INTS10Q9NVR2 710 aaKnown RBP13.75□□□□□ -0.21
DNMT3A-207ENST00000461228 STMN3Q9NZ72 180 aa13.75□□□□□ -0.21
DNMT3A-207ENST00000461228 TAC3Q9UHF0 121 aa13.75□□□□□ -0.21
DNMT3A-207ENST00000461228 RUVBL2Q9Y230 463 aaKnown RBP13.75□□□□□ -0.21
DNMT3A-207ENST00000461228 ZKSCAN5Q9Y2L8 839 aa13.75□□□□□ -0.21
DNMT3A-207ENST00000461228 PHF3Q92576 2039 aaKnown RBP13.74□□□□□ -0.21
DNMT3A-207ENST00000461228 A0A0A6YYC8 382 aaPredicted RBP13.74□□□□□ -0.21
DNMT3A-207ENST00000461228 TCRBV7S2A1N4TA0A589 114 aa13.74□□□□□ -0.21
DNMT3A-207ENST00000461228 I3L1I5 382 aaPredicted RBP13.74□□□□□ -0.21
DNMT3A-207ENST00000461228 P2RX6O15547 441 aa13.74□□□□□ -0.21
DNMT3A-207ENST00000461228 KRT38O76015 456 aa13.74□□□□□ -0.21
DNMT3A-207ENST00000461228 ESRRAP11474 423 aaPredicted RBP13.74□□□□□ -0.21
DNMT3A-207ENST00000461228 IGFBP2P18065 325 aa13.74□□□□□ -0.21
DNMT3A-207ENST00000461228 EEF1DP29692 281 aaKnown RBP13.74□□□□□ -0.21
DNMT3A-207ENST00000461228 NPY2RP49146 381 aa13.74□□□□□ -0.21
DNMT3A-207ENST00000461228 SEL1L2Q5TEA6 688 aa13.74□□□□□ -0.21
DNMT3A-207ENST00000461228 LRRC8EQ6NSJ5 796 aa13.74□□□□□ -0.21
DNMT3A-207ENST00000461228 TMEM214Q6NUQ4 689 aaKnown RBP13.74□□□□□ -0.21
DNMT3A-207ENST00000461228 SDCCAG8Q86SQ7 713 aaPredicted RBP13.74□□□□□ -0.21
DNMT3A-207ENST00000461228 LDB1Q86U70 411 aaPredicted RBP13.74□□□□□ -0.21
DNMT3A-207ENST00000461228 CDH24Q86UP0 819 aa13.74□□□□□ -0.21
DNMT3A-207ENST00000461228 LRRC56Q8IYG6 542 aaPredicted RBP13.74□□□□□ -0.21
DNMT3A-207ENST00000461228 BEST3Q8N1M1 668 aa13.74□□□□□ -0.21
DNMT3A-207ENST00000461228 GHDCQ8N2G8 530 aa13.74□□□□□ -0.21
DNMT3A-207ENST00000461228 CCDC89Q8N998 374 aa13.74□□□□□ -0.21
DNMT3A-207ENST00000461228 POGLUT1Q8NBL1 392 aa13.74□□□□□ -0.21
DNMT3A-207ENST00000461228 ADAMTS18Q8TE60 1221 aa13.74□□□□□ -0.21
DNMT3A-207ENST00000461228 ZNF480Q8WV37 535 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms