RNA–Protein interactions for RNA: ENST00000461009.1

RAB11FIP3-207, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 2

Gene RAB11FIP3, Length 514 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-207ENST00000461009 SPATA6LQ8N4H0 392 aa12.67□□□□□ -0.38
RAB11FIP3-207ENST00000461009 PROKR1Q8TCW9 393 aa12.67□□□□□ -0.38
RAB11FIP3-207ENST00000461009 DCAKDQ8WVC6 231 aa12.67□□□□□ -0.38
RAB11FIP3-207ENST00000461009 MTBPQ96DY7 904 aa12.67□□□□□ -0.38
RAB11FIP3-207ENST00000461009 CABS1Q96KC9 395 aa12.67□□□□□ -0.38
RAB11FIP3-207ENST00000461009 TSNARE1Q96NA8 513 aa12.67□□□□□ -0.38
RAB11FIP3-207ENST00000461009 IP6K3Q96PC2 410 aa12.67□□□□□ -0.38
RAB11FIP3-207ENST00000461009 SELENOSQ9BQE4 189 aa12.67□□□□□ -0.38
RAB11FIP3-207ENST00000461009 NDC1Q9BTX1 674 aa12.67□□□□□ -0.38
RAB11FIP3-207ENST00000461009 SLC25A23Q9BV35 468 aa12.67□□□□□ -0.38
RAB11FIP3-207ENST00000461009 SGPP1Q9BX95 441 aa12.67□□□□□ -0.38
RAB11FIP3-207ENST00000461009 ING2Q9H160 280 aa12.67□□□□□ -0.38
RAB11FIP3-207ENST00000461009 EPN3Q9H201 632 aa12.67□□□□□ -0.38
RAB11FIP3-207ENST00000461009 VPS11Q9H270 941 aa12.67□□□□□ -0.38
RAB11FIP3-207ENST00000461009 CNOT10Q9H9A5 744 aaKnown RBP12.67□□□□□ -0.38
RAB11FIP3-207ENST00000461009 PPCSQ9HAB8 311 aa12.67□□□□□ -0.38
RAB11FIP3-207ENST00000461009 PCMTD2Q9NV79 361 aa12.67□□□□□ -0.38
RAB11FIP3-207ENST00000461009 CD274Q9NZQ7 290 aa12.67□□□□□ -0.38
RAB11FIP3-207ENST00000461009 NDOR1Q9UHB4 597 aa12.67□□□□□ -0.38
RAB11FIP3-207ENST00000461009 IKZF3Q9UKT9 509 aa12.67□□□□□ -0.38
RAB11FIP3-207ENST00000461009 RNF112Q9ULX5 631 aa12.67□□□□□ -0.38
RAB11FIP3-207ENST00000461009 IQANK1A0A1B0GTG1 560 aa12.66□□□□□ -0.38
RAB11FIP3-207ENST00000461009 HMX2A2RU54 273 aa12.66□□□□□ -0.38
RAB11FIP3-207ENST00000461009 OR2A25A4D2G3 310 aa12.66□□□□□ -0.38
RAB11FIP3-207ENST00000461009 ARGFXA6NJG6 315 aa12.66□□□□□ -0.38
RAB11FIP3-207ENST00000461009 SYCE1LA8MT33 242 aa12.66□□□□□ -0.38
RAB11FIP3-207ENST00000461009 TRIM49D1C9J1S8 452 aa12.66□□□□□ -0.38
RAB11FIP3-207ENST00000461009 H7BY64 318 aa12.66□□□□□ -0.38
RAB11FIP3-207ENST00000461009 ZSCAN9O15535 394 aaPredicted RBP12.66□□□□□ -0.38
RAB11FIP3-207ENST00000461009 KLHL41O60662 606 aa12.66□□□□□ -0.38
RAB11FIP3-207ENST00000461009 KLHL2O95198 593 aa12.66□□□□□ -0.38
RAB11FIP3-207ENST00000461009 IGHEP01854 428 aa12.66□□□□□ -0.38
RAB11FIP3-207ENST00000461009 MYBL2P10244 700 aa12.66□□□□□ -0.38
RAB11FIP3-207ENST00000461009 PIM1P11309 404 aaPredicted RBP12.66□□□□□ -0.38
RAB11FIP3-207ENST00000461009 COL6A2P12110 1019 aa12.66□□□□□ -0.38
RAB11FIP3-207ENST00000461009 EZRP15311 586 aaKnown RBP12.66□□□□□ -0.38
RAB11FIP3-207ENST00000461009 NPPBP16860 134 aa12.66□□□□□ -0.38
RAB11FIP3-207ENST00000461009 TFEBP19484 476 aa12.66□□□□□ -0.38
RAB11FIP3-207ENST00000461009 GRK3P35626 688 aa12.66□□□□□ -0.38
RAB11FIP3-207ENST00000461009 CCL11P51671 97 aa12.66□□□□□ -0.38
RAB11FIP3-207ENST00000461009 DCDP81605 110 aaKnown RBP12.66□□□□□ -0.38
RAB11FIP3-207ENST00000461009 GRM7Q14831 915 aa12.66□□□□□ -0.38
RAB11FIP3-207ENST00000461009 ACAP2Q15057 778 aa12.66□□□□□ -0.38
RAB11FIP3-207ENST00000461009 NCF4Q15080 339 aa12.66□□□□□ -0.38
RAB11FIP3-207ENST00000461009 DEFB110Q30KQ9 67 aa12.66□□□□□ -0.38
RAB11FIP3-207ENST00000461009 FAM214AQ32MH5 1076 aa12.66□□□□□ -0.38
RAB11FIP3-207ENST00000461009 YOD1Q5VVQ6 348 aaPredicted RBP12.66□□□□□ -0.38
RAB11FIP3-207ENST00000461009 SULT1C3Q6IMI6 304 aa12.66□□□□□ -0.38
RAB11FIP3-207ENST00000461009 FBXO42Q6P3S6 717 aa12.66□□□□□ -0.38
RAB11FIP3-207ENST00000461009 MED25Q71SY5 747 aa12.66□□□□□ -0.38
RAB11FIP3-207ENST00000461009 ADCK2Q7Z695 626 aa12.66□□□□□ -0.38
RAB11FIP3-207ENST00000461009 ATCAYQ86WG3 371 aa12.66□□□□□ -0.38
RAB11FIP3-207ENST00000461009 PAQR7Q86WK9 346 aa12.66□□□□□ -0.38
RAB11FIP3-207ENST00000461009 TBC1D19Q8N5T2 526 aa12.66□□□□□ -0.38
RAB11FIP3-207ENST00000461009 TMEM102Q8N9M5 508 aaPredicted RBP12.66□□□□□ -0.38
RAB11FIP3-207ENST00000461009 TTC29Q8NA56 475 aaPredicted RBP12.66□□□□□ -0.38
RAB11FIP3-207ENST00000461009 RERGQ96A58 199 aaPredicted RBP12.66□□□□□ -0.38
RAB11FIP3-207ENST00000461009 PYCR2Q96C36 320 aa12.66□□□□□ -0.38
RAB11FIP3-207ENST00000461009 NXNL1Q96CM4 212 aa12.66□□□□□ -0.38
RAB11FIP3-207ENST00000461009 PRAP1Q96NZ9 151 aa12.66□□□□□ -0.38
RAB11FIP3-207ENST00000461009 RUFY1Q96T51 708 aa12.66□□□□□ -0.38
RAB11FIP3-207ENST00000461009 ZFYVE21Q9BQ24 234 aa12.66□□□□□ -0.38
RAB11FIP3-207ENST00000461009 SPRTNQ9H040 489 aaPredicted RBP12.66□□□□□ -0.38
RAB11FIP3-207ENST00000461009 SLC6A20Q9NP91 592 aa12.66□□□□□ -0.38
RAB11FIP3-207ENST00000461009 DYRK1BQ9Y463 629 aa12.66□□□□□ -0.38
RAB11FIP3-207ENST00000461009 KCNE2Q9Y6J6 123 aa12.66□□□□□ -0.38
RAB11FIP3-207ENST00000461009 A0A0J9YVX5 310 aa12.65□□□□□ -0.38
RAB11FIP3-207ENST00000461009 NCF1BA6NI72 391 aaPredicted RBP12.65□□□□□ -0.38
RAB11FIP3-207ENST00000461009 NCF1CA8MVU1 366 aaPredicted RBP12.65□□□□□ -0.38
RAB11FIP3-207ENST00000461009 PEX12O00623 359 aa12.65□□□□□ -0.38
RAB11FIP3-207ENST00000461009 TXNDC9O14530 226 aa12.65□□□□□ -0.38
RAB11FIP3-207ENST00000461009 CTSVO60911 334 aa12.65□□□□□ -0.38
RAB11FIP3-207ENST00000461009 IPO13O94829 963 aaKnown RBP12.65□□□□□ -0.38
RAB11FIP3-207ENST00000461009 ALDOAP04075 364 aaKnown RBP12.65□□□□□ -0.38
RAB11FIP3-207ENST00000461009 RBP1P09455 135 aa12.65□□□□□ -0.38
RAB11FIP3-207ENST00000461009 NCF1P14598 390 aaPredicted RBP12.65□□□□□ -0.38
RAB11FIP3-207ENST00000461009 VSX2P58304 361 aaPredicted RBP12.65□□□□□ -0.38
RAB11FIP3-207ENST00000461009 VSNL1P62760 191 aa12.65□□□□□ -0.38
RAB11FIP3-207ENST00000461009 IL10RAQ13651 578 aa12.65□□□□□ -0.38
RAB11FIP3-207ENST00000461009 OR4D1Q15615 310 aa12.65□□□□□ -0.38
RAB11FIP3-207ENST00000461009 PTCHD3Q3KNS1 767 aa12.65□□□□□ -0.38
RAB11FIP3-207ENST00000461009 MLIPQ5VWP3 458 aa12.65□□□□□ -0.38
RAB11FIP3-207ENST00000461009 ZNF425Q6IV72 752 aa12.65□□□□□ -0.38
RAB11FIP3-207ENST00000461009 RHBDD2Q6NTF9 364 aa12.65□□□□□ -0.38
RAB11FIP3-207ENST00000461009 EMBQ6PCB8 327 aa12.65□□□□□ -0.38
RAB11FIP3-207ENST00000461009 RNF44Q7L0R7 432 aa12.65□□□□□ -0.38
RAB11FIP3-207ENST00000461009 ISCA2Q86U28 154 aa12.65□□□□□ -0.38
RAB11FIP3-207ENST00000461009 THOC6Q86W42 341 aaKnown RBP12.65□□□□□ -0.38
RAB11FIP3-207ENST00000461009 HPS6Q86YV9 775 aa12.65□□□□□ -0.38
RAB11FIP3-207ENST00000461009 ZNF655Q8N720 491 aaPredicted RBP12.65□□□□□ -0.38
RAB11FIP3-207ENST00000461009 RHEBL1Q8TAI7 183 aa12.65□□□□□ -0.38
RAB11FIP3-207ENST00000461009 ISL2Q96A47 359 aa12.65□□□□□ -0.38
RAB11FIP3-207ENST00000461009 RHBDF1Q96CC6 855 aa12.65□□□□□ -0.38
RAB11FIP3-207ENST00000461009 THAP11Q96EK4 314 aa12.65□□□□□ -0.38
RAB11FIP3-207ENST00000461009 CAPS2Q9BXY5 557 aa12.65□□□□□ -0.38
RAB11FIP3-207ENST00000461009 UNKQ9C0B0 810 aaKnown RBP12.65□□□□□ -0.38
RAB11FIP3-207ENST00000461009 ALG9Q9H6U8 611 aa12.65□□□□□ -0.38
RAB11FIP3-207ENST00000461009 IGSF5Q9NSI5 407 aa12.65□□□□□ -0.38
RAB11FIP3-207ENST00000461009 WWOXQ9NZC7 414 aa12.65□□□□□ -0.38
RAB11FIP3-207ENST00000461009 IFT80Q9P2H3 777 aaPredicted RBP12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms