RNA–Protein interactions for RNA: ENST00000460826.1

HDLBP-229, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 442 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-229ENST00000460826 PELI2Q9HAT8 420 aa13.39□□□□□ -0.27
HDLBP-229ENST00000460826 OPTCQ9UBM4 332 aa13.39□□□□□ -0.27
HDLBP-229ENST00000460826 DCDC2Q9UHG0 476 aa13.39□□□□□ -0.27
HDLBP-229ENST00000460826 RAXQ9Y2V3 346 aa13.39□□□□□ -0.27
HDLBP-229ENST00000460826 PCDHB3Q9Y5E6 796 aa13.39□□□□□ -0.27
HDLBP-229ENST00000460826 PKD1L2Q7Z442 2459 aa13.39□□□□□ -0.27
HDLBP-229ENST00000460826 DSPP15924 2871 aaKnown RBP13.39□□□□□ -0.27
HDLBP-229ENST00000460826 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.38□□□□□ -0.27
HDLBP-229ENST00000460826 STMND1H3BQB6 276 aa13.38□□□□□ -0.27
HDLBP-229ENST00000460826 RGS16O15492 202 aaPredicted RBP13.38□□□□□ -0.27
HDLBP-229ENST00000460826 P2RX6O15547 441 aa13.38□□□□□ -0.27
HDLBP-229ENST00000460826 ZNF749O43361 778 aa13.38□□□□□ -0.27
HDLBP-229ENST00000460826 DLX3O60479 287 aa13.38□□□□□ -0.27
HDLBP-229ENST00000460826 PLIN3O60664 434 aa13.38□□□□□ -0.27
HDLBP-229ENST00000460826 SMIM24O75264 130 aa13.38□□□□□ -0.27
HDLBP-229ENST00000460826 SPAG7O75391 227 aa13.38□□□□□ -0.27
HDLBP-229ENST00000460826 MED26O95402 600 aa13.38□□□□□ -0.27
HDLBP-229ENST00000460826 PROCP04070 461 aa13.38□□□□□ -0.27
HDLBP-229ENST00000460826 EIF2S1P05198 315 aaKnown RBP13.38□□□□□ -0.27
HDLBP-229ENST00000460826 LIPCP11150 499 aa13.38□□□□□ -0.27
HDLBP-229ENST00000460826 GNAZP19086 355 aa13.38□□□□□ -0.27
HDLBP-229ENST00000460826 CD82P27701 267 aa13.38□□□□□ -0.27
HDLBP-229ENST00000460826 EEF1DP29692 281 aaKnown RBP13.38□□□□□ -0.27
HDLBP-229ENST00000460826 CRHR1P34998 444 aa13.38□□□□□ -0.27
HDLBP-229ENST00000460826 SNRPNP63162 240 aaKnown RBP13.38□□□□□ -0.27
HDLBP-229ENST00000460826 REEP5Q00765 189 aa13.38□□□□□ -0.27
HDLBP-229ENST00000460826 RELAQ04206 551 aa13.38□□□□□ -0.27
HDLBP-229ENST00000460826 GPS2Q13227 327 aa13.38□□□□□ -0.27
HDLBP-229ENST00000460826 CASP8Q14790 479 aa13.38□□□□□ -0.27
HDLBP-229ENST00000460826 WASHC2DQ5SRD0 308 aa13.38□□□□□ -0.27
HDLBP-229ENST00000460826 RPS27LQ71UM5 84 aaKnown RBP13.38□□□□□ -0.27
HDLBP-229ENST00000460826 GPR135Q8IZ08 494 aa13.38□□□□□ -0.27
HDLBP-229ENST00000460826 DTWD1Q8N5C7 304 aa13.38□□□□□ -0.27
HDLBP-229ENST00000460826 TEX9Q8N6V9 391 aa13.38□□□□□ -0.27
HDLBP-229ENST00000460826 ACTR5Q9H9F9 607 aaPredicted RBP13.38□□□□□ -0.27
HDLBP-229ENST00000460826 AKIRIN1Q9H9L7 192 aaPredicted RBP13.38□□□□□ -0.27
HDLBP-229ENST00000460826 ACSS2Q9NR19 701 aa13.38□□□□□ -0.27
HDLBP-229ENST00000460826 IRAK4Q9NWZ3 460 aa13.38□□□□□ -0.27
HDLBP-229ENST00000460826 GEMIN8Q9NWZ8 242 aaKnown RBP13.38□□□□□ -0.27
HDLBP-229ENST00000460826 MKS1Q9NXB0 559 aa13.38□□□□□ -0.27
HDLBP-229ENST00000460826 GPRC5BQ9NZH0 403 aa13.38□□□□□ -0.27
HDLBP-229ENST00000460826 TRBC2A0A5B9 178 aa13.37□□□□□ -0.27
HDLBP-229ENST00000460826 FITM1A5D6W6 292 aa13.37□□□□□ -0.27
HDLBP-229ENST00000460826 TMEM8BA6NDV4 472 aa13.37□□□□□ -0.27
HDLBP-229ENST00000460826 G3V2L1 256 aa13.37□□□□□ -0.27
HDLBP-229ENST00000460826 STX16-NPEPL1H3BU86 382 aa13.37□□□□□ -0.27
HDLBP-229ENST00000460826 STX16O14662 325 aa13.37□□□□□ -0.27
HDLBP-229ENST00000460826 CLGNO14967 610 aa13.37□□□□□ -0.27
HDLBP-229ENST00000460826 ZSCAN9O15535 394 aaPredicted RBP13.37□□□□□ -0.27
HDLBP-229ENST00000460826 RAD1O60671 282 aa13.37□□□□□ -0.27
HDLBP-229ENST00000460826 SRPX2O60687 465 aaPredicted RBP13.37□□□□□ -0.27
HDLBP-229ENST00000460826 CPNE3O75131 537 aaKnown RBP13.37□□□□□ -0.27
HDLBP-229ENST00000460826 C1GALT1C1LP0DN25 315 aa13.37□□□□□ -0.27
HDLBP-229ENST00000460826 CD22P20273 847 aa13.37□□□□□ -0.27
HDLBP-229ENST00000460826 EIF2S3P41091 472 aaKnown RBP13.37□□□□□ -0.27
HDLBP-229ENST00000460826 CCT5P48643 541 aa13.37□□□□□ -0.27
HDLBP-229ENST00000460826 RPS15AP62244 130 aaKnown RBP13.37□□□□□ -0.27
HDLBP-229ENST00000460826 SRSF6Q13247 344 aaKnown RBP13.37□□□□□ -0.27
HDLBP-229ENST00000460826 CLN3Q13286 438 aa13.37□□□□□ -0.27
HDLBP-229ENST00000460826 DOC2AQ14183 400 aa13.37□□□□□ -0.27
HDLBP-229ENST00000460826 SLBPQ14493 270 aaKnown RBP eCLIP13.37□□□□□ -0.27
HDLBP-229ENST00000460826 HKDC1Q2TB90 917 aa13.37□□□□□ -0.27
HDLBP-229ENST00000460826 PRTGQ2VWP7 1150 aa13.37□□□□□ -0.27
HDLBP-229ENST00000460826 TNFAIP8L3Q5GJ75 292 aa13.37□□□□□ -0.27
HDLBP-229ENST00000460826 ATG9BQ674R7 924 aa13.37□□□□□ -0.27
HDLBP-229ENST00000460826 GOLGA7Q7Z5G4 137 aa13.37□□□□□ -0.27
HDLBP-229ENST00000460826 ANKRD53Q8N9V6 530 aa13.37□□□□□ -0.27
HDLBP-229ENST00000460826 MFSD9Q8NBP5 474 aa13.37□□□□□ -0.27
HDLBP-229ENST00000460826 ZNF248Q8NDW4 579 aa13.37□□□□□ -0.27
HDLBP-229ENST00000460826 KCNE4Q8WWG9 221 aa13.37□□□□□ -0.27
HDLBP-229ENST00000460826 NKD1Q969G9 470 aa13.37□□□□□ -0.27
HDLBP-229ENST00000460826 MOCOSQ96EN8 888 aa13.37□□□□□ -0.27
HDLBP-229ENST00000460826 APOPT1Q96IL0 206 aa13.37□□□□□ -0.27
HDLBP-229ENST00000460826 NSUN5Q96P11 429 aaKnown RBP13.37□□□□□ -0.27
HDLBP-229ENST00000460826 MACROD1Q9BQ69 325 aa13.37□□□□□ -0.27
HDLBP-229ENST00000460826 SARGQ9BW04 601 aa13.37□□□□□ -0.27
HDLBP-229ENST00000460826 CENPHQ9H3R5 247 aa13.37□□□□□ -0.27
HDLBP-229ENST00000460826 ENAMQ9NRM1 1142 aa13.37□□□□□ -0.27
HDLBP-229ENST00000460826 SLC17A7Q9P2U7 560 aa13.37□□□□□ -0.27
HDLBP-229ENST00000460826 DHCR7Q9UBM7 475 aaKnown RBP13.37□□□□□ -0.27
HDLBP-229ENST00000460826 PCTPQ9UKL6 214 aa13.37□□□□□ -0.27
HDLBP-229ENST00000460826 GRID1Q9ULK0 1009 aa13.37□□□□□ -0.27
HDLBP-229ENST00000460826 TMCO1Q9UM00 188 aa13.37□□□□□ -0.27
HDLBP-229ENST00000460826 PCDHGA4Q9Y5G9 962 aa13.37□□□□□ -0.27
HDLBP-229ENST00000460826 SCN2AQ99250 2005 aa13.37□□□□□ -0.27
HDLBP-229ENST00000460826 KCNE1BA0A087WTH5 132 aa13.36□□□□□ -0.27
HDLBP-229ENST00000460826 E2F3O00716 465 aa13.36□□□□□ -0.27
HDLBP-229ENST00000460826 OR1F1O43749 312 aa13.36□□□□□ -0.27
HDLBP-229ENST00000460826 RPS17P08708 135 aaKnown RBP13.36□□□□□ -0.27
HDLBP-229ENST00000460826 EPB42P16452 691 aa13.36□□□□□ -0.27
HDLBP-229ENST00000460826 TAC1P20366 129 aa13.36□□□□□ -0.27
HDLBP-229ENST00000460826 ATP5F1P24539 256 aaPredicted RBP13.36□□□□□ -0.27
HDLBP-229ENST00000460826 RORAP35398 523 aa13.36□□□□□ -0.27
HDLBP-229ENST00000460826 GRK3P35626 688 aa13.36□□□□□ -0.27
HDLBP-229ENST00000460826 SCTRP47872 440 aa13.36□□□□□ -0.27
HDLBP-229ENST00000460826 NFKB2Q00653 900 aa13.36□□□□□ -0.27
HDLBP-229ENST00000460826 CHIT1Q13231 466 aa13.36□□□□□ -0.27
HDLBP-229ENST00000460826 GTF2H2Q13888 395 aa13.36□□□□□ -0.27
HDLBP-229ENST00000460826 XKR6Q5GH73 641 aa13.36□□□□□ -0.27
HDLBP-229ENST00000460826 TCTE1Q5JU00 501 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms