RNA–Protein interactions for RNA: ENST00000460162.1

PTPN4-207, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-207ENST00000460162 TTC4O95801 387 aa21.63■■□□□ 1.05
PTPN4-207ENST00000460162 RGS4P49798 205 aa21.63■■□□□ 1.05
PTPN4-207ENST00000460162 LAPTM4BQ86VI4 370 aa21.63■■□□□ 1.05
PTPN4-207ENST00000460162 C2CD4AQ8NCU7 369 aaPredicted RBP21.63■■□□□ 1.05
PTPN4-207ENST00000460162 ST6GALNAC3Q8NDV1 305 aa21.63■■□□□ 1.05
PTPN4-207ENST00000460162 LMF1Q96S06 567 aa21.63■■□□□ 1.05
PTPN4-207ENST00000460162 YIPF2Q9BWQ6 316 aa21.63■■□□□ 1.05
PTPN4-207ENST00000460162 PCBD2Q9H0N5 130 aa21.63■■□□□ 1.05
PTPN4-207ENST00000460162 IARS2Q9NSE4 1012 aaKnown RBP21.63■■□□□ 1.05
PTPN4-207ENST00000460162 RIC8BQ9NVN3 520 aa21.63■■□□□ 1.05
PTPN4-207ENST00000460162 ERRFI1Q9UJM3 462 aaPredicted RBP21.63■■□□□ 1.05
PTPN4-207ENST00000460162 IGHV1-45A0A0A0MS14 117 aa21.62■■□□□ 1.05
PTPN4-207ENST00000460162 A0A0A6YYC8 382 aaPredicted RBP21.62■■□□□ 1.05
PTPN4-207ENST00000460162 I3L1I5 382 aaPredicted RBP21.62■■□□□ 1.05
PTPN4-207ENST00000460162 FFAR3O14843 346 aa21.62■■□□□ 1.05
PTPN4-207ENST00000460162 GPR42O15529 346 aa21.62■■□□□ 1.05
PTPN4-207ENST00000460162 C8GP07360 202 aa21.62■■□□□ 1.05
PTPN4-207ENST00000460162 HEXBP07686 556 aa21.62■■□□□ 1.05
PTPN4-207ENST00000460162 RPS15AP62244 130 aaKnown RBP21.62■■□□□ 1.05
PTPN4-207ENST00000460162 CDC16Q13042 620 aa21.62■■□□□ 1.05
PTPN4-207ENST00000460162 C4orf17Q53FE4 359 aa21.62■■□□□ 1.05
PTPN4-207ENST00000460162 LINC00696Q6ZRV3 163 aa21.62■■□□□ 1.05
PTPN4-207ENST00000460162 SPNS2Q8IVW8 549 aa21.62■■□□□ 1.05
PTPN4-207ENST00000460162 ZC3H7AQ8IWR0 971 aaKnown RBP21.62■■□□□ 1.05
PTPN4-207ENST00000460162 MCOLN3Q8TDD5 553 aa21.62■■□□□ 1.05
PTPN4-207ENST00000460162 NAT9Q9BTE0 207 aa21.62■■□□□ 1.05
PTPN4-207ENST00000460162 TMEM184CQ9NVA4 438 aa21.62■■□□□ 1.05
PTPN4-207ENST00000460162 TAS2R13Q9NYV9 303 aa21.62■■□□□ 1.05
PTPN4-207ENST00000460162 ASIC3Q9UHC3 531 aa21.62■■□□□ 1.05
PTPN4-207ENST00000460162 SNX12Q9UMY4 172 aa21.62■■□□□ 1.05
PTPN4-207ENST00000460162 SLC5A6Q9Y289 635 aa21.62■■□□□ 1.05
PTPN4-207ENST00000460162 POLEQ07864 2286 aa21.62■■□□□ 1.05
PTPN4-207ENST00000460162 LOC102723996A0A087X1L8 192 aa21.61■■□□□ 1.05
PTPN4-207ENST00000460162 H7BY64 318 aa21.61■■□□□ 1.05
PTPN4-207ENST00000460162 DNALI1O14645 258 aaPredicted RBP21.61■■□□□ 1.05
PTPN4-207ENST00000460162 LDLRP01130 860 aa21.61■■□□□ 1.05
PTPN4-207ENST00000460162 SERPINA7P05543 415 aa21.61■■□□□ 1.05
PTPN4-207ENST00000460162 PRR35P0CG20 571 aa21.61■■□□□ 1.05
PTPN4-207ENST00000460162 SOX11P35716 441 aa21.61■■□□□ 1.05
PTPN4-207ENST00000460162 AVPR1BP47901 424 aa21.61■■□□□ 1.05
PTPN4-207ENST00000460162 EEF1A2Q05639 463 aaKnown RBP21.61■■□□□ 1.05
PTPN4-207ENST00000460162 SPANXN3Q5MJ09 141 aa21.61■■□□□ 1.05
PTPN4-207ENST00000460162 RIPOR1Q6ZS17 1223 aa21.61■■□□□ 1.05
PTPN4-207ENST00000460162 KIAA0408Q6ZU52 694 aa21.61■■□□□ 1.05
PTPN4-207ENST00000460162 PLD3Q8IV08 490 aa21.61■■□□□ 1.05
PTPN4-207ENST00000460162 CNTN4Q8IWV2 1026 aa21.61■■□□□ 1.05
PTPN4-207ENST00000460162 SLCO2A1Q92959 643 aa21.61■■□□□ 1.05
PTPN4-207ENST00000460162 CCDC138Q96M89 665 aa21.61■■□□□ 1.05
PTPN4-207ENST00000460162 C5orf34Q96MH7 638 aa21.61■■□□□ 1.05
PTPN4-207ENST00000460162 PRAP1Q96NZ9 151 aa21.61■■□□□ 1.05
PTPN4-207ENST00000460162 NDNQ99608 321 aa21.61■■□□□ 1.05
PTPN4-207ENST00000460162 KCNE1BA0A087WTH5 132 aa21.6■■□□□ 1.05
PTPN4-207ENST00000460162 WIPF3A6NGB9 483 aa21.6■■□□□ 1.05
PTPN4-207ENST00000460162 H0YIG0 161 aa21.6■■□□□ 1.05
PTPN4-207ENST00000460162 ZSCAN12O43309 604 aa21.6■■□□□ 1.05
PTPN4-207ENST00000460162 KLHL18O94889 574 aa21.6■■□□□ 1.05
PTPN4-207ENST00000460162 NSA2O95478 260 aaKnown RBP21.6■■□□□ 1.05
PTPN4-207ENST00000460162 CYC1P08574 325 aa21.6■■□□□ 1.05
PTPN4-207ENST00000460162 CCND1P24385 295 aa21.6■■□□□ 1.05
PTPN4-207ENST00000460162 AP2B1P63010 937 aa21.6■■□□□ 1.05
PTPN4-207ENST00000460162 DHX9Q08211 1270 aaKnown RBP21.6■■□□□ 1.05
PTPN4-207ENST00000460162 RPUSD3Q6P087 351 aaKnown RBP21.6■■□□□ 1.05
PTPN4-207ENST00000460162 VN1R4Q7Z5H5 301 aa21.6■■□□□ 1.05
PTPN4-207ENST00000460162 PCGF5Q86SE9 256 aa21.6■■□□□ 1.05
PTPN4-207ENST00000460162 GALNT7Q86SF2 657 aa21.6■■□□□ 1.05
PTPN4-207ENST00000460162 PALM2Q8IXS6 379 aa21.6■■□□□ 1.05
PTPN4-207ENST00000460162 MYO1HQ8N1T3 1032 aa21.6■■□□□ 1.05
PTPN4-207ENST00000460162 GRHL3Q8TE85 626 aa21.6■■□□□ 1.05
PTPN4-207ENST00000460162 THAP11Q96EK4 314 aa21.6■■□□□ 1.05
PTPN4-207ENST00000460162 ADAMTS6Q9UKP5 1117 aa21.6■■□□□ 1.05
PTPN4-207ENST00000460162 PDE10AQ9Y233 779 aa21.6■■□□□ 1.05
PTPN4-207ENST00000460162 MRPS2Q9Y399 296 aaKnown RBP21.6■■□□□ 1.05
PTPN4-207ENST00000460162 E2F3O00716 465 aa21.59■■□□□ 1.05
PTPN4-207ENST00000460162 SLC16A5O15375 505 aa21.59■■□□□ 1.05
PTPN4-207ENST00000460162 BMP10O95393 424 aa21.59■■□□□ 1.05
PTPN4-207ENST00000460162 ARG2P78540 354 aa21.59■■□□□ 1.05
PTPN4-207ENST00000460162 TIAL1Q01085 375 aaKnown RBP eCLIP21.59■■□□□ 1.059e-7■■■■□ 22.7
PTPN4-207ENST00000460162 SYT16Q17RD7 645 aa21.59■■□□□ 1.05
PTPN4-207ENST00000460162 TMEM205Q6UW68 189 aa21.59■■□□□ 1.05
PTPN4-207ENST00000460162 FAM180AQ6UWF9 173 aa21.59■■□□□ 1.05
PTPN4-207ENST00000460162 BRIX1Q8TDN6 353 aaKnown RBP21.59■■□□□ 1.05
PTPN4-207ENST00000460162 EEF1AKMT1Q8WVE0 214 aa21.59■■□□□ 1.05
PTPN4-207ENST00000460162 FAR1Q8WVX9 515 aa21.59■■□□□ 1.05
PTPN4-207ENST00000460162 PSMF1Q92530 271 aa21.59■■□□□ 1.05
PTPN4-207ENST00000460162 TEX15Q9BXT5 2789 aa21.59■■□□□ 1.05
PTPN4-207ENST00000460162 ZNF700Q9H0M5 742 aa21.59■■□□□ 1.05
PTPN4-207ENST00000460162 DDX47Q9H0S4 455 aaKnown RBP21.59■■□□□ 1.05
PTPN4-207ENST00000460162 PARVBQ9HBI1 364 aa21.59■■□□□ 1.05
PTPN4-207ENST00000460162 MKL2Q9ULH7 1088 aa21.59■■□□□ 1.05
PTPN4-207ENST00000460162 A1L4Q6 167 aa21.58■■□□□ 1.05
PTPN4-207ENST00000460162 DYTNA2CJ06 578 aa21.58■■□□□ 1.05
PTPN4-207ENST00000460162 EDN3P14138 238 aa21.58■■□□□ 1.05
PTPN4-207ENST00000460162 CSNK1G2P78368 415 aa21.58■■□□□ 1.05
PTPN4-207ENST00000460162 MAT1AQ00266 395 aaKnown RBP21.58■■□□□ 1.05
PTPN4-207ENST00000460162 INAQ16352 499 aa21.58■■□□□ 1.05
PTPN4-207ENST00000460162 RBM20Q5T481 1227 aaKnown RBP21.58■■□□□ 1.05
PTPN4-207ENST00000460162 HIST2H2BCQ6DN03 193 aa21.58■■□□□ 1.05
PTPN4-207ENST00000460162 FAAH2Q6GMR7 532 aa21.58■■□□□ 1.05
PTPN4-207ENST00000460162 AGTRAPQ6RW13 159 aa21.58■■□□□ 1.05
PTPN4-207ENST00000460162 MAMDC2Q7Z304 686 aaPredicted RBP21.58■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms