RNA–Protein interactions for RNA: ENST00000458640.5

DDX39B-214, Transcript of DExD-box helicase 39B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX39B, Length 2,003 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-214ENST00000458640 ADAM15Q13444 863 aa11.02□□□□□ -0.64
DDX39B-214ENST00000458640 ZMYND11Q15326 602 aa11.02□□□□□ -0.64
DDX39B-214ENST00000458640 TCTN1Q2MV58 587 aa11.02□□□□□ -0.64
DDX39B-214ENST00000458640 GPR158Q5T848 1215 aa11.02□□□□□ -0.64
DDX39B-214ENST00000458640 OTUD1Q5VV17 481 aaPredicted RBP11.02□□□□□ -0.64
DDX39B-214ENST00000458640 BSPRYQ5W0U4 402 aa11.02□□□□□ -0.64
DDX39B-214ENST00000458640 CAPN13Q6MZZ7 669 aaPredicted RBP11.02□□□□□ -0.64
DDX39B-214ENST00000458640 PLET1Q6UQ28 207 aa11.02□□□□□ -0.64
DDX39B-214ENST00000458640 HFE2Q6ZVN8 426 aa11.02□□□□□ -0.64
DDX39B-214ENST00000458640 LARP4Q71RC2 724 aaKnown RBP eCLIP11.02□□□□□ -0.641e-17■□□□□ 10.7
DDX39B-214ENST00000458640 NECAB2Q7Z6G3 386 aa11.02□□□□□ -0.64
DDX39B-214ENST00000458640 ZC3HC1Q86WB0 502 aaKnown RBP11.02□□□□□ -0.64
DDX39B-214ENST00000458640 ZSWIM9Q86XI8 627 aa11.02□□□□□ -0.64
DDX39B-214ENST00000458640 STX12Q86Y82 276 aa11.02□□□□□ -0.64
DDX39B-214ENST00000458640 ZNF540Q8NDQ6 660 aa11.02□□□□□ -0.64
DDX39B-214ENST00000458640 DUSP18Q8NEJ0 188 aa11.02□□□□□ -0.64
DDX39B-214ENST00000458640 TTPALQ9BTX7 342 aa11.02□□□□□ -0.64
DDX39B-214ENST00000458640 TMEM106CQ9BVX2 250 aa11.02□□□□□ -0.64
DDX39B-214ENST00000458640 GPR62Q9BZJ7 368 aa11.02□□□□□ -0.64
DDX39B-214ENST00000458640 PIGUQ9H490 435 aa11.02□□□□□ -0.64
DDX39B-214ENST00000458640 TASP1Q9H6P5 420 aa11.02□□□□□ -0.64
DDX39B-214ENST00000458640 TRIM45Q9H8W5 580 aaPredicted RBP11.02□□□□□ -0.64
DDX39B-214ENST00000458640 C14orf119Q9NWQ9 140 aa11.02□□□□□ -0.64
DDX39B-214ENST00000458640 COX16Q9P0S2 106 aa11.02□□□□□ -0.64
DDX39B-214ENST00000458640 SLC43A1O75387 559 aa11.02□□□□□ -0.65
DDX39B-214ENST00000458640 ERN1O75460 977 aaKnown RBP11.02□□□□□ -0.65
DDX39B-214ENST00000458640 TNFRSF21O75509 655 aa11.02□□□□□ -0.65
DDX39B-214ENST00000458640 IFNA4P05014 189 aa11.02□□□□□ -0.65
DDX39B-214ENST00000458640 MTHFRP42898 656 aa11.02□□□□□ -0.65
DDX39B-214ENST00000458640 RPP38P78345 283 aaKnown RBP11.02□□□□□ -0.65
DDX39B-214ENST00000458640 LIPEQ05469 1076 aa11.02□□□□□ -0.65
DDX39B-214ENST00000458640 ELP6Q0PNE2 266 aa11.02□□□□□ -0.65
DDX39B-214ENST00000458640 USP10Q14694 798 aaKnown RBP11.02□□□□□ -0.65
DDX39B-214ENST00000458640 MZT2BQ6NZ67 158 aa11.02□□□□□ -0.65
DDX39B-214ENST00000458640 CMC1Q7Z7K0 106 aa11.02□□□□□ -0.65
DDX39B-214ENST00000458640 B3GNT8Q7Z7M8 397 aa11.02□□□□□ -0.65
DDX39B-214ENST00000458640 ADHFE1Q8IWW8 467 aa11.02□□□□□ -0.65
DDX39B-214ENST00000458640 OR52E4Q8NGH9 312 aa11.02□□□□□ -0.65
DDX39B-214ENST00000458640 PCDH19Q8TAB3 1148 aa11.02□□□□□ -0.65
DDX39B-214ENST00000458640 SETD7Q8WTS6 366 aaKnown RBP11.02□□□□□ -0.65
DDX39B-214ENST00000458640 PAWRQ96IZ0 340 aaKnown RBP11.02□□□□□ -0.65
DDX39B-214ENST00000458640 CSPG4P5Q96PW8 444 aa11.02□□□□□ -0.65
DDX39B-214ENST00000458640 KCTD15Q96SI1 283 aaPredicted RBP11.02□□□□□ -0.65
DDX39B-214ENST00000458640 HTATIP2Q9BUP3 242 aa11.02□□□□□ -0.65
DDX39B-214ENST00000458640 C1QTNF1Q9BXJ1 281 aa11.02□□□□□ -0.65
DDX39B-214ENST00000458640 SRRQ9GZT4 340 aa11.02□□□□□ -0.65
DDX39B-214ENST00000458640 POLE3Q9NRF9 147 aa11.02□□□□□ -0.65
DDX39B-214ENST00000458640 PIGVQ9NUD9 493 aa11.02□□□□□ -0.65
DDX39B-214ENST00000458640 ERVK13-1Q9NX77 482 aa11.02□□□□□ -0.65
DDX39B-214ENST00000458640 PSAT1Q9Y617 370 aa11.02□□□□□ -0.65
DDX39B-214ENST00000458640 PLXNA3P51805 1871 aa11.02□□□□□ -0.65
DDX39B-214ENST00000458640 hCG_1807616A0A1W2PRN6 198 aa11.01□□□□□ -0.65
DDX39B-214ENST00000458640 TIMP1P01033 207 aa11.01□□□□□ -0.65
DDX39B-214ENST00000458640 PIGAP37287 484 aa11.01□□□□□ -0.65
DDX39B-214ENST00000458640 RABGGTBP53611 331 aa11.01□□□□□ -0.65
DDX39B-214ENST00000458640 SNRPD2P62316 118 aaKnown RBP11.01□□□□□ -0.65
DDX39B-214ENST00000458640 IFRD2Q12894 506 aaPredicted RBP11.01□□□□□ -0.65
DDX39B-214ENST00000458640 GPR17Q13304 367 aa11.01□□□□□ -0.65
DDX39B-214ENST00000458640 FAM214AQ32MH5 1076 aa11.01□□□□□ -0.65
DDX39B-214ENST00000458640 PITRM1Q5JRX3 1037 aa11.01□□□□□ -0.65
DDX39B-214ENST00000458640 MLIPQ5VWP3 458 aa11.01□□□□□ -0.65
DDX39B-214ENST00000458640 CASC4Q6P4E1 433 aa11.01□□□□□ -0.65
DDX39B-214ENST00000458640 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.01□□□□□ -0.65
DDX39B-214ENST00000458640 BEND4Q6ZU67 534 aa11.01□□□□□ -0.65
DDX39B-214ENST00000458640 USP45Q70EL2 814 aa11.01□□□□□ -0.65
DDX39B-214ENST00000458640 PDZD4Q76G19 769 aaPredicted RBP11.01□□□□□ -0.65
DDX39B-214ENST00000458640 BHLHA9Q7RTU4 235 aa11.01□□□□□ -0.65
DDX39B-214ENST00000458640 FAM9CQ8IZT9 166 aa11.01□□□□□ -0.65
DDX39B-214ENST00000458640 PQLC3Q8N755 202 aa11.01□□□□□ -0.65
DDX39B-214ENST00000458640 RNF139Q8WU17 664 aa11.01□□□□□ -0.65
DDX39B-214ENST00000458640 EDEM1Q92611 657 aa11.01□□□□□ -0.65
DDX39B-214ENST00000458640 KIAA1191Q96A73 305 aa11.01□□□□□ -0.65
DDX39B-214ENST00000458640 TBC1D20Q96BZ9 403 aa11.01□□□□□ -0.65
DDX39B-214ENST00000458640 NPAS1Q99742 590 aa11.01□□□□□ -0.65
DDX39B-214ENST00000458640 GSX2Q9BZM3 304 aa11.01□□□□□ -0.65
DDX39B-214ENST00000458640 SAV1Q9H4B6 383 aaPredicted RBP11.01□□□□□ -0.65
DDX39B-214ENST00000458640 WDCPQ9H6R7 721 aa11.01□□□□□ -0.65
DDX39B-214ENST00000458640 PRDM5Q9NQX1 630 aaPredicted RBP11.01□□□□□ -0.65
DDX39B-214ENST00000458640 CATSPERZQ9NTU4 200 aa11.01□□□□□ -0.65
DDX39B-214ENST00000458640 DPP7Q9UHL4 492 aa11.01□□□□□ -0.65
DDX39B-214ENST00000458640 STUB1Q9UNE7 303 aa11.01□□□□□ -0.65
DDX39B-214ENST00000458640 U3KQV3 271 aa11.01□□□□□ -0.65
DDX39B-214ENST00000458640 ZFC3H1O60293 1989 aaKnown RBP11.01□□□□□ -0.65
DDX39B-214ENST00000458640 CIB4A0PJX0 185 aa11.01□□□□□ -0.65
DDX39B-214ENST00000458640 MPTX1A8MV57 137 aa11.01□□□□□ -0.65
DDX39B-214ENST00000458640 LINC01387J3KSC0 135 aa11.01□□□□□ -0.65
DDX39B-214ENST00000458640 TNFRSF10BO14763 440 aa11.01□□□□□ -0.65
DDX39B-214ENST00000458640 XPNPEP2O43895 674 aa11.01□□□□□ -0.65
DDX39B-214ENST00000458640 DLX3O60479 287 aa11.01□□□□□ -0.65
DDX39B-214ENST00000458640 FADS2O95864 444 aaKnown RBP11.01□□□□□ -0.65
DDX39B-214ENST00000458640 TP53P04637 393 aaPredicted RBP11.01□□□□□ -0.65
DDX39B-214ENST00000458640 SBK3P0C264 359 aa11.01□□□□□ -0.65
DDX39B-214ENST00000458640 H2AFB1P0C5Y9 115 aa11.01□□□□□ -0.65
DDX39B-214ENST00000458640 H2AFB2P0C5Z0 115 aa11.01□□□□□ -0.65
DDX39B-214ENST00000458640 C4BPBP20851 252 aa11.01□□□□□ -0.65
DDX39B-214ENST00000458640 ATP5F1P24539 256 aaPredicted RBP11.01□□□□□ -0.65
DDX39B-214ENST00000458640 ADRA1BP35368 520 aa11.01□□□□□ -0.65
DDX39B-214ENST00000458640 GLUD2P49448 558 aa11.01□□□□□ -0.65
DDX39B-214ENST00000458640 VASPP50552 380 aaPredicted RBP11.01□□□□□ -0.65
DDX39B-214ENST00000458640 ERVFC1P60507 584 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms