RNA–Protein interactions for RNA: ENST00000458038.5

CPNE1-220, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-220ENST00000458038 PCOLCEQ15113 449 aa20.41■□□□□ 0.86
CPNE1-220ENST00000458038 FAAH2Q6GMR7 532 aa20.41■□□□□ 0.86
CPNE1-220ENST00000458038 CENPUQ71F23 418 aa20.41■□□□□ 0.86
CPNE1-220ENST00000458038 ZNF480Q8WV37 535 aa20.41■□□□□ 0.86
CPNE1-220ENST00000458038 ASB11Q8WXH4 323 aa20.41■□□□□ 0.86
CPNE1-220ENST00000458038 FAM136AQ96C01 138 aa20.41■□□□□ 0.86
CPNE1-220ENST00000458038 IMMP1LQ96LU5 166 aa20.41■□□□□ 0.86
CPNE1-220ENST00000458038 STMN3Q9NZ72 180 aa20.41■□□□□ 0.86
CPNE1-220ENST00000458038 SAMD15Q9P1V8 674 aa20.41■□□□□ 0.86
CPNE1-220ENST00000458038 GALPQ9UBC7 116 aa20.41■□□□□ 0.86
CPNE1-220ENST00000458038 PCYOX1Q9UHG3 505 aa20.41■□□□□ 0.86
CPNE1-220ENST00000458038 A0A0A6YYC8 382 aaPredicted RBP20.4■□□□□ 0.86
CPNE1-220ENST00000458038 ARHGAP10A1A4S6 786 aa20.4■□□□□ 0.86
CPNE1-220ENST00000458038 OR5H15A6NDH6 313 aa20.4■□□□□ 0.86
CPNE1-220ENST00000458038 GOLGA6L6A8MZA4 724 aa20.4■□□□□ 0.86
CPNE1-220ENST00000458038 H0YIG0 161 aa20.4■□□□□ 0.86
CPNE1-220ENST00000458038 I3L1I5 382 aaPredicted RBP20.4■□□□□ 0.86
CPNE1-220ENST00000458038 GFYI3L273 518 aa20.4■□□□□ 0.86
CPNE1-220ENST00000458038 SMAPO00193 183 aa20.4■□□□□ 0.86
CPNE1-220ENST00000458038 ZBTB14O43829 449 aa20.4■□□□□ 0.86
CPNE1-220ENST00000458038 MPC1LP0DKB6 136 aa20.4■□□□□ 0.86
CPNE1-220ENST00000458038 C8orf89P0DMQ9 161 aa20.4■□□□□ 0.86
CPNE1-220ENST00000458038 ITGAMP11215 1152 aa20.4■□□□□ 0.86
CPNE1-220ENST00000458038 ELAVL4P26378 380 aaKnown RBP20.4■□□□□ 0.86
CPNE1-220ENST00000458038 KCNK10P57789 538 aa20.4■□□□□ 0.86
CPNE1-220ENST00000458038 RBPJQ06330 500 aa20.4■□□□□ 0.86
CPNE1-220ENST00000458038 HIBCHQ6NVY1 386 aaPredicted RBP20.4■□□□□ 0.86
CPNE1-220ENST00000458038 ADCK2Q7Z695 626 aa20.4■□□□□ 0.86
CPNE1-220ENST00000458038 ZC3H7AQ8IWR0 971 aaKnown RBP20.4■□□□□ 0.86
CPNE1-220ENST00000458038 MCOLN3Q8TDD5 553 aa20.4■□□□□ 0.86
CPNE1-220ENST00000458038 THAP11Q96EK4 314 aa20.4■□□□□ 0.86
CPNE1-220ENST00000458038 CCDC68Q9H2F9 335 aa20.4■□□□□ 0.86
CPNE1-220ENST00000458038 TMEM184CQ9NVA4 438 aa20.4■□□□□ 0.86
CPNE1-220ENST00000458038 C19orf25Q9UFG5 118 aaPredicted RBP20.4■□□□□ 0.86
CPNE1-220ENST00000458038 PCDHGB6Q9Y5F9 930 aa20.4■□□□□ 0.86
CPNE1-220ENST00000458038 COMMD10Q9Y6G5 202 aa20.4■□□□□ 0.86
CPNE1-220ENST00000458038 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP20.39■□□□□ 0.85
CPNE1-220ENST00000458038 KCNE1BA0A087WTH5 132 aa20.39■□□□□ 0.85
CPNE1-220ENST00000458038 FAM237BA0A1B0GVD1 139 aa20.39■□□□□ 0.85
CPNE1-220ENST00000458038 PRAMEF2O60811 474 aa20.39■□□□□ 0.85
CPNE1-220ENST00000458038 NSA2O95478 260 aaKnown RBP20.39■□□□□ 0.85
CPNE1-220ENST00000458038 FGGP02679 453 aa20.39■□□□□ 0.85
CPNE1-220ENST00000458038 SKIV2L2P42285 1042 aaKnown RBP20.39■□□□□ 0.85
CPNE1-220ENST00000458038 MAGEA6P43360 314 aa20.39■□□□□ 0.85
CPNE1-220ENST00000458038 RPS15AP62244 130 aaKnown RBP20.39■□□□□ 0.85
CPNE1-220ENST00000458038 THEMIS2Q5TEJ8 643 aa20.39■□□□□ 0.85
CPNE1-220ENST00000458038 CASC4Q6P4E1 433 aa20.39■□□□□ 0.85
CPNE1-220ENST00000458038 KCNJ9Q92806 393 aa20.39■□□□□ 0.85
CPNE1-220ENST00000458038 FAM129AQ9BZQ8 928 aa20.39■□□□□ 0.85
CPNE1-220ENST00000458038 PCBD2Q9H0N5 130 aa20.39■□□□□ 0.85
CPNE1-220ENST00000458038 CHST11Q9NPF2 352 aa20.39■□□□□ 0.85
CPNE1-220ENST00000458038 SEC14L3Q9UDX4 400 aa20.39■□□□□ 0.85
CPNE1-220ENST00000458038 OTOGQ6ZRI0 2925 aa20.38■□□□□ 0.85
CPNE1-220ENST00000458038 CTAGE9A4FU28 777 aa20.38■□□□□ 0.85
CPNE1-220ENST00000458038 EIF3FO00303 357 aaPredicted RBP20.38■□□□□ 0.85
CPNE1-220ENST00000458038 FFAR3O14843 346 aa20.38■□□□□ 0.85
CPNE1-220ENST00000458038 GPR42O15529 346 aa20.38■□□□□ 0.85
CPNE1-220ENST00000458038 MLNP12872 115 aa20.38■□□□□ 0.85
CPNE1-220ENST00000458038 KCNJ1P48048 391 aa20.38■□□□□ 0.85
CPNE1-220ENST00000458038 THOC5Q13769 683 aaKnown RBP20.38■□□□□ 0.85
CPNE1-220ENST00000458038 PTK6Q13882 451 aa20.38■□□□□ 0.85
CPNE1-220ENST00000458038 KCNJ11Q14654 390 aa20.38■□□□□ 0.85
CPNE1-220ENST00000458038 PLAG1Q6DJT9 500 aa20.38■□□□□ 0.85
CPNE1-220ENST00000458038 RPTNQ6XPR3 784 aa20.38■□□□□ 0.85
CPNE1-220ENST00000458038 LMNTD2Q8IXW0 634 aa20.38■□□□□ 0.85
CPNE1-220ENST00000458038 ZNF808Q8N4W9 903 aaPredicted RBP20.38■□□□□ 0.85
CPNE1-220ENST00000458038 ITLN2Q8WWU7 325 aaPredicted RBP20.38■□□□□ 0.85
CPNE1-220ENST00000458038 CYTH2Q99418 400 aa20.38■□□□□ 0.85
CPNE1-220ENST00000458038 SYNPO2LQ9H987 977 aa20.38■□□□□ 0.85
CPNE1-220ENST00000458038 DHRS7Q9Y394 339 aa20.38■□□□□ 0.85
CPNE1-220ENST00000458038 TACC2O95359 2948 aa20.37■□□□□ 0.85
CPNE1-220ENST00000458038 TRGV8A0A0C4DH27 118 aa20.37■□□□□ 0.85
CPNE1-220ENST00000458038 HAT1O14929 419 aa20.37■□□□□ 0.85
CPNE1-220ENST00000458038 KIF5CO60282 957 aa20.37■□□□□ 0.85
CPNE1-220ENST00000458038 UNC5CO95185 931 aa20.37■□□□□ 0.85
CPNE1-220ENST00000458038 SYF2O95926 243 aaKnown RBP20.37■□□□□ 0.85
CPNE1-220ENST00000458038 CA7P43166 264 aa20.37■□□□□ 0.85
CPNE1-220ENST00000458038 AGTR2P50052 363 aa20.37■□□□□ 0.85
CPNE1-220ENST00000458038 CASP6P55212 293 aa20.37■□□□□ 0.85
CPNE1-220ENST00000458038 ZNF33BQ06732 778 aa20.37■□□□□ 0.85
CPNE1-220ENST00000458038 DHX34Q14147 1143 aaKnown RBP20.37■□□□□ 0.85
CPNE1-220ENST00000458038 SYT16Q17RD7 645 aa20.37■□□□□ 0.85
CPNE1-220ENST00000458038 ZNF470Q6ECI4 717 aa20.37■□□□□ 0.85
CPNE1-220ENST00000458038 ZNF662Q6ZS27 426 aa20.37■□□□□ 0.85
CPNE1-220ENST00000458038 CPEB2Q7Z5Q1 589 aaKnown RBP20.37■□□□□ 0.85
CPNE1-220ENST00000458038 PCGF5Q86SE9 256 aa20.37■□□□□ 0.85
CPNE1-220ENST00000458038 MCEMP1Q8IX19 187 aa20.37■□□□□ 0.85
CPNE1-220ENST00000458038 LRRC56Q8IYG6 542 aaPredicted RBP20.37■□□□□ 0.85
CPNE1-220ENST00000458038 PRELID2Q8N945 189 aa20.37■□□□□ 0.85
CPNE1-220ENST00000458038 SPC24Q8NBT2 197 aa20.37■□□□□ 0.85
CPNE1-220ENST00000458038 PPFIBP2Q8ND30 876 aa20.37■□□□□ 0.85
CPNE1-220ENST00000458038 CALML6Q8TD86 181 aa20.37■□□□□ 0.85
CPNE1-220ENST00000458038 ZNF354BQ96LW1 612 aa20.37■□□□□ 0.85
CPNE1-220ENST00000458038 VN1R1Q9GZP7 353 aa20.37■□□□□ 0.85
CPNE1-220ENST00000458038 SCN3AQ9NY46 2000 aa20.37■□□□□ 0.85
CPNE1-220ENST00000458038 DCHS2Q6V1P9 2916 aa20.36■□□□□ 0.85
CPNE1-220ENST00000458038 POLQO75417 2590 aa20.36■□□□□ 0.85
CPNE1-220ENST00000458038 TCRBV7S3A2A0A539 114 aa20.36■□□□□ 0.85
CPNE1-220ENST00000458038 SDR42E2A6NKP2 422 aa20.36■□□□□ 0.85
CPNE1-220ENST00000458038 H7BY64 318 aa20.36■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms