RNA–Protein interactions for RNA: ENST00000457924.2

UPF3AP2-201, Transcript of UPF3A pseudogene 2, humanhuman

BASIC

Gene UPF3AP2, Length 1,132 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3AP2-201ENST00000457924 GPR137Q96N19 417 aa13.59□□□□□ -0.23
UPF3AP2-201ENST00000457924 ACAT2Q9BWD1 397 aa13.59□□□□□ -0.23
UPF3AP2-201ENST00000457924 MRPS30Q9NP92 439 aaKnown RBP13.59□□□□□ -0.23
UPF3AP2-201ENST00000457924 CATSPERZQ9NTU4 200 aa13.59□□□□□ -0.23
UPF3AP2-201ENST00000457924 UTP6Q9NYH9 597 aaKnown RBP13.59□□□□□ -0.23
UPF3AP2-201ENST00000457924 GMPR2Q9P2T1 348 aaKnown RBP13.59□□□□□ -0.23
UPF3AP2-201ENST00000457924 RUVBL2Q9Y230 463 aaKnown RBP13.59□□□□□ -0.23
UPF3AP2-201ENST00000457924 ZNF835Q9Y2P0 537 aa13.59□□□□□ -0.23
UPF3AP2-201ENST00000457924 MEMO1Q9Y316 297 aa13.59□□□□□ -0.23
UPF3AP2-201ENST00000457924 PCDHGB6Q9Y5F9 930 aa13.59□□□□□ -0.23
UPF3AP2-201ENST00000457924 SETD2Q9BYW2 2564 aaPredicted RBP13.58□□□□□ -0.24
UPF3AP2-201ENST00000457924 A0A0A6YYC8 382 aaPredicted RBP13.58□□□□□ -0.24
UPF3AP2-201ENST00000457924 I3L1I5 382 aaPredicted RBP13.58□□□□□ -0.24
UPF3AP2-201ENST00000457924 TXNDC9O14530 226 aa13.58□□□□□ -0.24
UPF3AP2-201ENST00000457924 WISP2O76076 250 aa13.58□□□□□ -0.24
UPF3AP2-201ENST00000457924 PKMP14618 531 aaKnown RBP13.58□□□□□ -0.24
UPF3AP2-201ENST00000457924 RPA3P35244 121 aaPredicted RBP13.58□□□□□ -0.24
UPF3AP2-201ENST00000457924 ALDH6A1Q02252 535 aaKnown RBP13.58□□□□□ -0.24
UPF3AP2-201ENST00000457924 CDSNQ15517 529 aa13.58□□□□□ -0.24
UPF3AP2-201ENST00000457924 SYT16Q17RD7 645 aa13.58□□□□□ -0.24
UPF3AP2-201ENST00000457924 KRTAP21-3Q3LHN1 58 aa13.58□□□□□ -0.24
UPF3AP2-201ENST00000457924 Q6ZPB1 254 aaPredicted RBP13.58□□□□□ -0.24
UPF3AP2-201ENST00000457924 ZC3H7AQ8IWR0 971 aaKnown RBP13.58□□□□□ -0.24
UPF3AP2-201ENST00000457924 CCDC170Q8IYT3 715 aa13.58□□□□□ -0.24
UPF3AP2-201ENST00000457924 PLPP7Q8NBV4 271 aa13.58□□□□□ -0.24
UPF3AP2-201ENST00000457924 PEX13Q92968 403 aa13.58□□□□□ -0.24
UPF3AP2-201ENST00000457924 ZNF354BQ96LW1 612 aa13.58□□□□□ -0.24
UPF3AP2-201ENST00000457924 SPOCK3Q9BQ16 436 aa13.58□□□□□ -0.24
UPF3AP2-201ENST00000457924 PLCD4Q9BRC7 762 aa13.58□□□□□ -0.24
UPF3AP2-201ENST00000457924 DRC3Q9H069 523 aa13.58□□□□□ -0.24
UPF3AP2-201ENST00000457924 E7EVH7 732 aa13.57□□□□□ -0.24
UPF3AP2-201ENST00000457924 CD3EAPO15446 510 aaKnown RBP13.57□□□□□ -0.24
UPF3AP2-201ENST00000457924 FOXS1O43638 330 aa13.57□□□□□ -0.24
UPF3AP2-201ENST00000457924 SEC24DO94855 1032 aaPredicted RBP13.57□□□□□ -0.24
UPF3AP2-201ENST00000457924 SUN1O94901 812 aa13.57□□□□□ -0.24
UPF3AP2-201ENST00000457924 EEF1DP29692 281 aaKnown RBP13.57□□□□□ -0.24
UPF3AP2-201ENST00000457924 CYLC1P35663 651 aaPredicted RBP13.57□□□□□ -0.24
UPF3AP2-201ENST00000457924 TLE4Q04727 773 aa13.57□□□□□ -0.24
UPF3AP2-201ENST00000457924 TBX2Q13207 712 aaPredicted RBP13.57□□□□□ -0.24
UPF3AP2-201ENST00000457924 BTBD16Q32M84 506 aa13.57□□□□□ -0.24
UPF3AP2-201ENST00000457924 ACER2Q5QJU3 275 aa13.57□□□□□ -0.24
UPF3AP2-201ENST00000457924 MFSD4BQ5TF39 518 aa13.57□□□□□ -0.24
UPF3AP2-201ENST00000457924 PAQR7Q86WK9 346 aa13.57□□□□□ -0.24
UPF3AP2-201ENST00000457924 LRRC6Q86X45 466 aa13.57□□□□□ -0.24
UPF3AP2-201ENST00000457924 LINC00528Q8N1L1 170 aa13.57□□□□□ -0.24
UPF3AP2-201ENST00000457924 BEST3Q8N1M1 668 aa13.57□□□□□ -0.24
UPF3AP2-201ENST00000457924 AMER2Q8N7J2 671 aa13.57□□□□□ -0.24
UPF3AP2-201ENST00000457924 PPHLN1Q8NEY8 458 aaKnown RBP13.57□□□□□ -0.24
UPF3AP2-201ENST00000457924 SLC35B2Q8TB61 432 aa13.57□□□□□ -0.24
UPF3AP2-201ENST00000457924 SMPDL3AQ92484 453 aa13.57□□□□□ -0.24
UPF3AP2-201ENST00000457924 P2RY12Q9H244 342 aa13.57□□□□□ -0.24
UPF3AP2-201ENST00000457924 ETNK1Q9HBU6 452 aa13.57□□□□□ -0.24
UPF3AP2-201ENST00000457924 MCCC2Q9HCC0 563 aa13.57□□□□□ -0.24
UPF3AP2-201ENST00000457924 KLHL1Q9NR64 748 aa13.57□□□□□ -0.24
UPF3AP2-201ENST00000457924 C19orf25Q9UFG5 118 aaPredicted RBP13.57□□□□□ -0.24
UPF3AP2-201ENST00000457924 R3HDM2Q9Y2K5 976 aaKnown RBP13.57□□□□□ -0.24
UPF3AP2-201ENST00000457924 TCAF1Q9Y4C2 921 aa13.57□□□□□ -0.24
UPF3AP2-201ENST00000457924 GTF3C1Q12789 2109 aa13.57□□□□□ -0.24
UPF3AP2-201ENST00000457924 ZFHX3Q15911 3703 aa13.56□□□□□ -0.24
UPF3AP2-201ENST00000457924 A0A0U1RQJ8 604 aa13.56□□□□□ -0.24
UPF3AP2-201ENST00000457924 NPIPA5E9PKD4 350 aa13.56□□□□□ -0.24
UPF3AP2-201ENST00000457924 NDUFS3O75489 264 aa13.56□□□□□ -0.24
UPF3AP2-201ENST00000457924 CCNDBP1O95273 360 aa13.56□□□□□ -0.24
UPF3AP2-201ENST00000457924 EZRP15311 586 aaKnown RBP13.56□□□□□ -0.24
UPF3AP2-201ENST00000457924 ABOP16442 354 aa13.56□□□□□ -0.24
UPF3AP2-201ENST00000457924 RPS3P23396 243 aaKnown RBP eCLIP13.56□□□□□ -0.24
UPF3AP2-201ENST00000457924 FDFT1P37268 417 aa13.56□□□□□ -0.24
UPF3AP2-201ENST00000457924 GRIA1P42261 906 aa13.56□□□□□ -0.24
UPF3AP2-201ENST00000457924 AVPR1BP47901 424 aa13.56□□□□□ -0.24
UPF3AP2-201ENST00000457924 EIF3BP55884 814 aaKnown RBP13.56□□□□□ -0.24
UPF3AP2-201ENST00000457924 MAT1AQ00266 395 aaKnown RBP13.56□□□□□ -0.24
UPF3AP2-201ENST00000457924 TSTA3Q13630 321 aaPredicted RBP13.56□□□□□ -0.24
UPF3AP2-201ENST00000457924 TUBA3CQ13748 450 aa13.56□□□□□ -0.24
UPF3AP2-201ENST00000457924 FAM53BQ14153 422 aa13.56□□□□□ -0.24
UPF3AP2-201ENST00000457924 NDUFA9Q16795 377 aa13.56□□□□□ -0.24
UPF3AP2-201ENST00000457924 ANKRD20A4Q4UJ75 823 aa13.56□□□□□ -0.24
UPF3AP2-201ENST00000457924 FCRLBQ6BAA4 426 aa13.56□□□□□ -0.24
UPF3AP2-201ENST00000457924 PLAG1Q6DJT9 500 aa13.56□□□□□ -0.24
UPF3AP2-201ENST00000457924 TUBA3EQ6PEY2 450 aa13.56□□□□□ -0.24
UPF3AP2-201ENST00000457924 SUSD1Q6UWL2 747 aa13.56□□□□□ -0.24
UPF3AP2-201ENST00000457924 CPEB2Q7Z5Q1 589 aaKnown RBP13.56□□□□□ -0.24
UPF3AP2-201ENST00000457924 TMEM178AQ8NBL3 297 aa13.56□□□□□ -0.24
UPF3AP2-201ENST00000457924 FAM98AQ8NCA5 519 aaKnown RBP13.56□□□□□ -0.24
UPF3AP2-201ENST00000457924 MDS2Q8NDY4 140 aa13.56□□□□□ -0.24
UPF3AP2-201ENST00000457924 OR9A1PQ8NGU1 263 aa13.56□□□□□ -0.24
UPF3AP2-201ENST00000457924 OR2A5Q96R48 311 aa13.56□□□□□ -0.24
UPF3AP2-201ENST00000457924 UTP23Q9BRU9 249 aaKnown RBP13.56□□□□□ -0.24
UPF3AP2-201ENST00000457924 TSPAN10Q9H1Z9 355 aaPredicted RBP13.56□□□□□ -0.24
UPF3AP2-201ENST00000457924 KCNK13Q9HB14 408 aa13.56□□□□□ -0.24
UPF3AP2-201ENST00000457924 MARCH4Q9P2E8 410 aaPredicted RBP13.56□□□□□ -0.24
UPF3AP2-201ENST00000457924 NPIPA1Q9UND3 350 aa13.56□□□□□ -0.24
UPF3AP2-201ENST00000457924 DCHS2Q6V1P9 2916 aa13.56□□□□□ -0.24
UPF3AP2-201ENST00000457924 IGHV3-20A0A0C4DH32 117 aa13.55□□□□□ -0.24
UPF3AP2-201ENST00000457924 IGKV1-8A0A0C4DH67 115 aa13.55□□□□□ -0.24
UPF3AP2-201ENST00000457924 ASPDHA6ND91 283 aa13.55□□□□□ -0.24
UPF3AP2-201ENST00000457924 MATN4O95460 622 aa13.55□□□□□ -0.24
UPF3AP2-201ENST00000457924 CYC1P08574 325 aa13.55□□□□□ -0.24
UPF3AP2-201ENST00000457924 ERGP11308 486 aa13.55□□□□□ -0.24
UPF3AP2-201ENST00000457924 STIP1P31948 543 aaKnown RBP13.55□□□□□ -0.24
UPF3AP2-201ENST00000457924 EFNA3P52797 238 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms