RNA–Protein interactions for RNA: ENST00000455732.5

USP39-208, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-208ENST00000455732 CDKL4Q5MAI5 379 aa16.54■□□□□ 0.24
USP39-208ENST00000455732 UBAP2Q5T6F2 1119 aaKnown RBP16.54■□□□□ 0.24
USP39-208ENST00000455732 GARNL3Q5VVW2 1013 aa16.54■□□□□ 0.24
USP39-208ENST00000455732 PRMT9Q6P2P2 845 aa16.54■□□□□ 0.24
USP39-208ENST00000455732 FRA10AC1Q70Z53 315 aa16.54■□□□□ 0.24
USP39-208ENST00000455732 CCDC91Q7Z6B0 441 aa16.54■□□□□ 0.24
USP39-208ENST00000455732 IFT20Q8IY31 132 aa16.54■□□□□ 0.24
USP39-208ENST00000455732 KLHDC8AQ8IYD2 350 aa16.54■□□□□ 0.24
USP39-208ENST00000455732 ARHGEF39Q8N4T4 335 aa16.54■□□□□ 0.24
USP39-208ENST00000455732 CSNK1A1LQ8N752 337 aa16.54■□□□□ 0.24
USP39-208ENST00000455732 RERGQ96A58 199 aaPredicted RBP16.54■□□□□ 0.24
USP39-208ENST00000455732 MVB12AQ96EY5 273 aa16.54■□□□□ 0.24
USP39-208ENST00000455732 C10orf90Q96M02 699 aa16.54■□□□□ 0.24
USP39-208ENST00000455732 OR4K3Q96R72 315 aa16.54■□□□□ 0.24
USP39-208ENST00000455732 SARGQ9BW04 601 aa16.54■□□□□ 0.24
USP39-208ENST00000455732 SLC26A1Q9H2B4 701 aa16.54■□□□□ 0.24
USP39-208ENST00000455732 CLMPQ9H6B4 373 aa16.54■□□□□ 0.24
USP39-208ENST00000455732 NDOR1Q9UHB4 597 aa16.54■□□□□ 0.24
USP39-208ENST00000455732 GPN3Q9UHW5 284 aaPredicted RBP16.54■□□□□ 0.24
USP39-208ENST00000455732 MYO18BQ8IUG5 2567 aa16.54■□□□□ 0.24
USP39-208ENST00000455732 NBASA2RRP1 2371 aa16.53■□□□□ 0.24
USP39-208ENST00000455732 PYCARD-AS1I3L0S3 204 aa16.53■□□□□ 0.24
USP39-208ENST00000455732 RFPL1O75677 317 aa16.53■□□□□ 0.24
USP39-208ENST00000455732 MED26O95402 600 aa16.53■□□□□ 0.24
USP39-208ENST00000455732 EIF2S1P05198 315 aaKnown RBP16.53■□□□□ 0.24
USP39-208ENST00000455732 SLC35E2BP0CK96 405 aa16.53■□□□□ 0.24
USP39-208ENST00000455732 ALAS2P22557 587 aa16.53■□□□□ 0.24
USP39-208ENST00000455732 TGFBIQ15582 683 aa16.53■□□□□ 0.24
USP39-208ENST00000455732 COX15Q7KZN9 410 aa16.53■□□□□ 0.24
USP39-208ENST00000455732 OR4K1Q8NGD4 311 aa16.53■□□□□ 0.24
USP39-208ENST00000455732 OR2Y1Q8NGV0 311 aa16.53■□□□□ 0.24
USP39-208ENST00000455732 ALKBH8Q96BT7 664 aaKnown RBP16.53■□□□□ 0.24
USP39-208ENST00000455732 PYCR2Q96C36 320 aa16.53■□□□□ 0.24
USP39-208ENST00000455732 TRIM55Q9BYV6 548 aa16.53■□□□□ 0.24
USP39-208ENST00000455732 WDR54Q9H977 334 aa16.53■□□□□ 0.24
USP39-208ENST00000455732 ZNF71Q9NQZ8 489 aaPredicted RBP16.53■□□□□ 0.24
USP39-208ENST00000455732 RUVBL1Q9Y265 456 aaKnown RBP16.53■□□□□ 0.24
USP39-208ENST00000455732 HMX2A2RU54 273 aa16.52■□□□□ 0.24
USP39-208ENST00000455732 CNOT3O75175 753 aaKnown RBP16.52■□□□□ 0.24
USP39-208ENST00000455732 DNAJB5O75953 348 aa16.52■□□□□ 0.24
USP39-208ENST00000455732 ACSL3O95573 720 aa16.52■□□□□ 0.24
USP39-208ENST00000455732 CDH1P12830 882 aa16.52■□□□□ 0.24
USP39-208ENST00000455732 SLC6A12P48065 614 aa16.52■□□□□ 0.24
USP39-208ENST00000455732 MLIPQ5VWP3 458 aa16.52■□□□□ 0.24
USP39-208ENST00000455732 OVCH1Q7RTY7 1134 aa16.52■□□□□ 0.24
USP39-208ENST00000455732 VN1R4Q7Z5H5 301 aa16.52■□□□□ 0.24
USP39-208ENST00000455732 CMC1Q7Z7K0 106 aa16.52■□□□□ 0.24
USP39-208ENST00000455732 PTRH1Q86Y79 214 aaKnown RBP16.52■□□□□ 0.24
USP39-208ENST00000455732 PLD3Q8IV08 490 aa16.52■□□□□ 0.24
USP39-208ENST00000455732 TCAIMQ8N3R3 496 aa16.52■□□□□ 0.24
USP39-208ENST00000455732 SLC44A1Q8WWI5 657 aa16.52■□□□□ 0.24
USP39-208ENST00000455732 KIAA1191Q96A73 305 aa16.52■□□□□ 0.24
USP39-208ENST00000455732 RHBDF1Q96CC6 855 aa16.52■□□□□ 0.24
USP39-208ENST00000455732 CABS1Q96KC9 395 aa16.52■□□□□ 0.24
USP39-208ENST00000455732 EGFL8Q99944 293 aa16.52■□□□□ 0.24
USP39-208ENST00000455732 TLK1Q9UKI8 766 aa16.52■□□□□ 0.24
USP39-208ENST00000455732 NFU1Q9UMS0 254 aa16.52■□□□□ 0.24
USP39-208ENST00000455732 DOCK10Q96BY6 2186 aa16.52■□□□□ 0.24
USP39-208ENST00000455732 CCDC189A1A4V9 331 aa16.51■□□□□ 0.23
USP39-208ENST00000455732 MKRN2OSH3BPM6 223 aa16.51■□□□□ 0.23
USP39-208ENST00000455732 K7EM74 188 aa16.51■□□□□ 0.23
USP39-208ENST00000455732 P2RX6O15547 441 aa16.51■□□□□ 0.23
USP39-208ENST00000455732 GRK3P35626 688 aa16.51■□□□□ 0.23
USP39-208ENST00000455732 FOLR3P41439 243 aa16.51■□□□□ 0.23
USP39-208ENST00000455732 CCR8P51685 355 aa16.51■□□□□ 0.23
USP39-208ENST00000455732 CSHL1Q14406 222 aa16.51■□□□□ 0.23
USP39-208ENST00000455732 SSPNQ14714 243 aa16.51■□□□□ 0.23
USP39-208ENST00000455732 SLC9A5Q14940 896 aa16.51■□□□□ 0.23
USP39-208ENST00000455732 OR4D1Q15615 310 aa16.51■□□□□ 0.23
USP39-208ENST00000455732 HKDC1Q2TB90 917 aa16.51■□□□□ 0.23
USP39-208ENST00000455732 LACTB2Q53H82 288 aaPredicted RBP16.51■□□□□ 0.23
USP39-208ENST00000455732 MROH9Q5TGP6 573 aa16.51■□□□□ 0.23
USP39-208ENST00000455732 CPZQ66K79 652 aa16.51■□□□□ 0.23
USP39-208ENST00000455732 TCTN3Q6NUS6 607 aa16.51■□□□□ 0.23
USP39-208ENST00000455732 RAPH1Q70E73 1250 aa16.51■□□□□ 0.23
USP39-208ENST00000455732 TBC1D1Q86TI0 1168 aaPredicted RBP16.51■□□□□ 0.23
USP39-208ENST00000455732 THOC6Q86W42 341 aaKnown RBP16.51■□□□□ 0.23
USP39-208ENST00000455732 GPSM1Q86YR5 675 aa16.51■□□□□ 0.23
USP39-208ENST00000455732 RAB43Q86YS6 212 aa16.51■□□□□ 0.23
USP39-208ENST00000455732 SPATA6LQ8N4H0 392 aa16.51■□□□□ 0.23
USP39-208ENST00000455732 PDPRQ8NCN5 879 aa16.51■□□□□ 0.23
USP39-208ENST00000455732 LRRN4CLQ8ND94 238 aa16.51■□□□□ 0.23
USP39-208ENST00000455732 SLC5A11Q8WWX8 675 aa16.51■□□□□ 0.23
USP39-208ENST00000455732 NEIL2Q969S2 332 aa16.51■□□□□ 0.23
USP39-208ENST00000455732 PTERQ96BW5 349 aa16.51■□□□□ 0.23
USP39-208ENST00000455732 UNKQ9C0B0 810 aaKnown RBP16.51■□□□□ 0.23
USP39-208ENST00000455732 PELI2Q9HAT8 420 aa16.51■□□□□ 0.23
USP39-208ENST00000455732 NXT1Q9UKK6 140 aaKnown RBP16.51■□□□□ 0.23
USP39-208ENST00000455732 CDC14AQ9UNH5 594 aa16.51■□□□□ 0.23
USP39-208ENST00000455732 TP53TG5Q9Y2B4 290 aa16.51■□□□□ 0.23
USP39-208ENST00000455732 PTRH2Q9Y3E5 179 aaKnown RBP16.51■□□□□ 0.23
USP39-208ENST00000455732 UBR5O95071 2799 aaPredicted RBP16.5■□□□□ 0.23
USP39-208ENST00000455732 A0A087X1B8 175 aa16.5■□□□□ 0.23
USP39-208ENST00000455732 VSTM2BA6NLU5 285 aa16.5■□□□□ 0.23
USP39-208ENST00000455732 IPO13O94829 963 aaKnown RBP16.5■□□□□ 0.23
USP39-208ENST00000455732 ABHD2P08910 425 aa16.5■□□□□ 0.23
USP39-208ENST00000455732 LTA4HP09960 611 aaKnown RBP16.5■□□□□ 0.23
USP39-208ENST00000455732 RHOXF2BP0C7M4 288 aa16.5■□□□□ 0.23
USP39-208ENST00000455732 NR1D1P20393 614 aa16.5■□□□□ 0.23
USP39-208ENST00000455732 GGT5P36269 586 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms