RNA–Protein interactions for RNA: ENST00000455546.6

GTF3C3-208, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 4

Gene GTF3C3, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-208ENST00000455546 GOLGA8KD6RF30 607 aa4.5□□□□□ -1.69
GTF3C3-208ENST00000455546 E7EVH7 732 aa4.5□□□□□ -1.69
GTF3C3-208ENST00000455546 GOLGA8TH3BQL2 631 aa4.5□□□□□ -1.69
GTF3C3-208ENST00000455546 MATN2O00339 956 aa4.5□□□□□ -1.69
GTF3C3-208ENST00000455546 LIN7AO14910 233 aaPredicted RBP4.5□□□□□ -1.69
GTF3C3-208ENST00000455546 PSMD3O43242 534 aa4.5□□□□□ -1.69
GTF3C3-208ENST00000455546 NRP2O60462 931 aa4.5□□□□□ -1.69
GTF3C3-208ENST00000455546 DPM1O60762 260 aa4.5□□□□□ -1.69
GTF3C3-208ENST00000455546 AP2A2O94973 939 aa4.5□□□□□ -1.69
GTF3C3-208ENST00000455546 IPO7O95373 1038 aaKnown RBP4.5□□□□□ -1.69
GTF3C3-208ENST00000455546 UMODP07911 640 aa4.5□□□□□ -1.69
GTF3C3-208ENST00000455546 F7P08709 466 aaPredicted RBP4.5□□□□□ -1.69
GTF3C3-208ENST00000455546 OR56A5P0C7T3 313 aa4.5□□□□□ -1.69
GTF3C3-208ENST00000455546 MAGP20916 626 aa4.5□□□□□ -1.69
GTF3C3-208ENST00000455546 SHMT2P34897 504 aa4.5□□□□□ -1.69
GTF3C3-208ENST00000455546 OR1D4P47884 311 aa4.5□□□□□ -1.69
GTF3C3-208ENST00000455546 GLRBP48167 497 aa4.5□□□□□ -1.69
GTF3C3-208ENST00000455546 YBX1P67809 324 aaKnown RBP4.5□□□□□ -1.69
GTF3C3-208ENST00000455546 DCDP81605 110 aaKnown RBP4.5□□□□□ -1.69
GTF3C3-208ENST00000455546 KIF5AQ12840 1032 aa4.5□□□□□ -1.69
GTF3C3-208ENST00000455546 RPA4Q13156 261 aa4.5□□□□□ -1.69
GTF3C3-208ENST00000455546 GRB7Q14451 532 aa4.5□□□□□ -1.69
GTF3C3-208ENST00000455546 ITIH4Q14624 930 aa4.5□□□□□ -1.69
GTF3C3-208ENST00000455546 KIR3DS1Q14943 382 aa4.5□□□□□ -1.69
GTF3C3-208ENST00000455546 P3H1Q32P28 736 aa4.5□□□□□ -1.69
GTF3C3-208ENST00000455546 CCSMST1Q4G0I0 132 aa4.5□□□□□ -1.69
GTF3C3-208ENST00000455546 FASTKD1Q53R41 847 aaKnown RBP4.5□□□□□ -1.69
GTF3C3-208ENST00000455546 TSTD2Q5T7W7 516 aa4.5□□□□□ -1.69
GTF3C3-208ENST00000455546 PAPD7Q5XG87 772 aaKnown RBP4.5□□□□□ -1.69
GTF3C3-208ENST00000455546 FCRL6Q6DN72 434 aa4.5□□□□□ -1.69
GTF3C3-208ENST00000455546 FIGLAQ6QHK4 219 aa4.5□□□□□ -1.69
GTF3C3-208ENST00000455546 CES3Q6UWW8 571 aa4.5□□□□□ -1.69
GTF3C3-208ENST00000455546 PPP1R21Q6ZMI0 780 aa4.5□□□□□ -1.69
GTF3C3-208ENST00000455546 TTLL10Q6ZVT0 673 aa4.5□□□□□ -1.69
GTF3C3-208ENST00000455546 MED25Q71SY5 747 aa4.5□□□□□ -1.69
GTF3C3-208ENST00000455546 ZNF534Q76KX8 674 aa4.5□□□□□ -1.69
GTF3C3-208ENST00000455546 MAMDC2Q7Z304 686 aaPredicted RBP4.5□□□□□ -1.69
GTF3C3-208ENST00000455546 LINC00523Q86TU6 105 aa4.5□□□□□ -1.69
GTF3C3-208ENST00000455546 THNSL2Q86YJ6 484 aa4.5□□□□□ -1.69
GTF3C3-208ENST00000455546 TBC1D21Q8IYX1 336 aa4.5□□□□□ -1.69
GTF3C3-208ENST00000455546 CARFQ8N187 725 aa4.5□□□□□ -1.69
GTF3C3-208ENST00000455546 METTL27Q8N6F8 245 aaPredicted RBP4.5□□□□□ -1.69
GTF3C3-208ENST00000455546 UBL4BQ8N7F7 174 aa4.5□□□□□ -1.69
GTF3C3-208ENST00000455546 LINC01555Q8NAE3 123 aa4.5□□□□□ -1.69
GTF3C3-208ENST00000455546 OR4L1Q8NH43 312 aa4.5□□□□□ -1.69
GTF3C3-208ENST00000455546 OR5K2Q8NHB8 316 aa4.5□□□□□ -1.69
GTF3C3-208ENST00000455546 SEC14L1Q92503 715 aa4.5□□□□□ -1.69
GTF3C3-208ENST00000455546 PTERQ96BW5 349 aa4.5□□□□□ -1.69
GTF3C3-208ENST00000455546 FAM136AQ96C01 138 aa4.5□□□□□ -1.69
GTF3C3-208ENST00000455546 LRRC45Q96CN5 670 aa4.5□□□□□ -1.69
GTF3C3-208ENST00000455546 SNRNP40Q96DI7 357 aaKnown RBP4.5□□□□□ -1.69
GTF3C3-208ENST00000455546 MISP3Q96FF7 219 aa4.5□□□□□ -1.69
GTF3C3-208ENST00000455546 GBP5Q96PP8 586 aa4.5□□□□□ -1.69
GTF3C3-208ENST00000455546 JMJD8Q96S16 334 aa4.5□□□□□ -1.69
GTF3C3-208ENST00000455546 RANBP9Q96S59 729 aa4.5□□□□□ -1.69
GTF3C3-208ENST00000455546 SMAD5Q99717 465 aaKnown RBP4.5□□□□□ -1.69
GTF3C3-208ENST00000455546 MESP1Q9BRJ9 268 aa4.5□□□□□ -1.69
GTF3C3-208ENST00000455546 G6PC3Q9BUM1 346 aa4.5□□□□□ -1.69
GTF3C3-208ENST00000455546 MENTQ9BUN1 341 aa4.5□□□□□ -1.69
GTF3C3-208ENST00000455546 AP1M1Q9BXS5 423 aa4.5□□□□□ -1.69
GTF3C3-208ENST00000455546 ZNF552Q9H707 407 aaPredicted RBP4.5□□□□□ -1.69
GTF3C3-208ENST00000455546 VPS37BQ9H9H4 285 aa4.5□□□□□ -1.69
GTF3C3-208ENST00000455546 CHRAC1Q9NRG0 131 aa4.5□□□□□ -1.69
GTF3C3-208ENST00000455546 SLC22A11Q9NSA0 550 aa4.5□□□□□ -1.69
GTF3C3-208ENST00000455546 ASF1BQ9NVP2 202 aa4.5□□□□□ -1.69
GTF3C3-208ENST00000455546 P4HTMQ9NXG6 502 aa4.5□□□□□ -1.69
GTF3C3-208ENST00000455546 EURLQ9NYK6 297 aa4.5□□□□□ -1.69
GTF3C3-208ENST00000455546 GPR83Q9NYM4 423 aa4.5□□□□□ -1.69
GTF3C3-208ENST00000455546 CAMSAP3Q9P1Y5 1249 aaPredicted RBP4.5□□□□□ -1.69
GTF3C3-208ENST00000455546 MARCH4Q9P2E8 410 aaPredicted RBP4.5□□□□□ -1.69
GTF3C3-208ENST00000455546 IFT80Q9P2H3 777 aaPredicted RBP4.5□□□□□ -1.69
GTF3C3-208ENST00000455546 GALPQ9UBC7 116 aa4.5□□□□□ -1.69
GTF3C3-208ENST00000455546 PLEKHB1Q9UF11 243 aaPredicted RBP4.5□□□□□ -1.69
GTF3C3-208ENST00000455546 POLG2Q9UHN1 485 aa4.5□□□□□ -1.69
GTF3C3-208ENST00000455546 FEZ2Q9UHY8 353 aaPredicted RBP4.5□□□□□ -1.69
GTF3C3-208ENST00000455546 GUCA1BQ9UMX6 200 aa4.5□□□□□ -1.69
GTF3C3-208ENST00000455546 ZNF148Q9UQR1 794 aa4.5□□□□□ -1.69
GTF3C3-208ENST00000455546 RUVBL2Q9Y230 463 aaKnown RBP4.5□□□□□ -1.69
GTF3C3-208ENST00000455546 CSAG2Q9Y5P2 127 aa4.5□□□□□ -1.69
GTF3C3-208ENST00000455546 NFS1Q9Y697 457 aa4.5□□□□□ -1.69
GTF3C3-208ENST00000455546 MAU2Q9Y6X3 613 aa4.5□□□□□ -1.69
GTF3C3-208ENST00000455546 CROCCQ5TZA2 2017 aa4.5□□□□□ -1.69
GTF3C3-208ENST00000455546 LOC105369274A0A096LPK9 316 aa4.49□□□□□ -1.69
GTF3C3-208ENST00000455546 LOC102723532A0A0G2JNH3 316 aa4.49□□□□□ -1.69
GTF3C3-208ENST00000455546 A0A0J9YVX5 310 aa4.49□□□□□ -1.69
GTF3C3-208ENST00000455546 HEATR9A2RTY3 570 aa4.49□□□□□ -1.69
GTF3C3-208ENST00000455546 C7orf72A4D263 438 aa4.49□□□□□ -1.69
GTF3C3-208ENST00000455546 PEX12O00623 359 aa4.49□□□□□ -1.69
GTF3C3-208ENST00000455546 FFAR3O14843 346 aa4.49□□□□□ -1.69
GTF3C3-208ENST00000455546 GPR42O15529 346 aa4.49□□□□□ -1.69
GTF3C3-208ENST00000455546 ZSCAN9O15535 394 aaPredicted RBP4.49□□□□□ -1.69
GTF3C3-208ENST00000455546 LIASO43766 372 aa4.49□□□□□ -1.69
GTF3C3-208ENST00000455546 CBX6O95503 412 aa4.49□□□□□ -1.69
GTF3C3-208ENST00000455546 GAS8O95995 478 aa4.49□□□□□ -1.69
GTF3C3-208ENST00000455546 FTH1P02794 183 aa4.49□□□□□ -1.69
GTF3C3-208ENST00000455546 APRTP07741 180 aa4.49□□□□□ -1.69
GTF3C3-208ENST00000455546 HBQ1P09105 142 aa4.49□□□□□ -1.69
GTF3C3-208ENST00000455546 ZGLP1P0C6A0 271 aa4.49□□□□□ -1.69
GTF3C3-208ENST00000455546 MSL3P1P0C860 447 aa4.49□□□□□ -1.69
GTF3C3-208ENST00000455546 ITGAXP20702 1163 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms