RNA–Protein interactions for RNA: ENST00000453858.1

SBDSP1-204, Transcript of SBDS, ribosome maturation factor pseudogene 1, humanhuman

BASIC

Gene SBDSP1, Length 737 nt, Biotype transcribed unprocessed pseudogene, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDSP1-204ENST00000453858 RIPPLY2Q5TAB7 128 aa4.91□□□□□ -1.62
SBDSP1-204ENST00000453858 ARHGAP11AQ6P4F7 1023 aa4.91□□□□□ -1.62
SBDSP1-204ENST00000453858 CDHR3Q6ZTQ4 885 aa4.91□□□□□ -1.62
SBDSP1-204ENST00000453858 NEK10Q6ZWH5 1172 aa4.91□□□□□ -1.62
SBDSP1-204ENST00000453858 NLRP14Q86W24 1093 aa4.91□□□□□ -1.62
SBDSP1-204ENST00000453858 TTC30BQ8N4P2 665 aa4.91□□□□□ -1.62
SBDSP1-204ENST00000453858 AMER3Q8N944 861 aa4.91□□□□□ -1.62
SBDSP1-204ENST00000453858 C16orf52Q8NHV5 167 aa4.91□□□□□ -1.62
SBDSP1-204ENST00000453858 FAM216AQ8WUB2 273 aa4.91□□□□□ -1.62
SBDSP1-204ENST00000453858 CASKIN2Q8WXE0 1202 aa4.91□□□□□ -1.62
SBDSP1-204ENST00000453858 SEMA4DQ92854 862 aa4.91□□□□□ -1.62
SBDSP1-204ENST00000453858 SCAMP4Q969E2 229 aa4.91□□□□□ -1.62
SBDSP1-204ENST00000453858 KIAA1191Q96A73 305 aa4.91□□□□□ -1.62
SBDSP1-204ENST00000453858 MARK4Q96L34 752 aa4.91□□□□□ -1.62
SBDSP1-204ENST00000453858 IMMP1LQ96LU5 166 aa4.91□□□□□ -1.62
SBDSP1-204ENST00000453858 AK8Q96MA6 479 aa4.91□□□□□ -1.62
SBDSP1-204ENST00000453858 TNFRSF13CQ96RJ3 184 aa4.91□□□□□ -1.62
SBDSP1-204ENST00000453858 NPAS2Q99743 824 aa4.91□□□□□ -1.62
SBDSP1-204ENST00000453858 PITPNM3Q9BZ71 974 aa4.91□□□□□ -1.62
SBDSP1-204ENST00000453858 DNAI2Q9GZS0 605 aa4.91□□□□□ -1.62
SBDSP1-204ENST00000453858 ABCG8Q9H221 673 aa4.91□□□□□ -1.62
SBDSP1-204ENST00000453858 FANCEQ9HB96 536 aa4.91□□□□□ -1.62
SBDSP1-204ENST00000453858 METTL14Q9HCE5 456 aaKnown RBP4.91□□□□□ -1.62
SBDSP1-204ENST00000453858 KLC4Q9NSK0 619 aa4.91□□□□□ -1.62
SBDSP1-204ENST00000453858 JKAMPQ9P055 326 aa4.91□□□□□ -1.62
SBDSP1-204ENST00000453858 B4GALT7Q9UBV7 327 aa4.91□□□□□ -1.62
SBDSP1-204ENST00000453858 PRSS50Q9UI38 385 aa4.91□□□□□ -1.62
SBDSP1-204ENST00000453858 TRHDEQ9UKU6 1024 aa4.91□□□□□ -1.62
SBDSP1-204ENST00000453858 TMPRSS11EQ9UL52 423 aa4.91□□□□□ -1.62
SBDSP1-204ENST00000453858 KIAA1257Q9ULG3 409 aa4.91□□□□□ -1.62
SBDSP1-204ENST00000453858 KIAA1549Q9HCM3 1950 aa4.91□□□□□ -1.62
SBDSP1-204ENST00000453858 STARD9Q9P2P6 4700 aa4.9□□□□□ -1.62
SBDSP1-204ENST00000453858 PLECQ15149 4684 aaKnown RBP4.9□□□□□ -1.62
SBDSP1-204ENST00000453858 QSOX1O00391 747 aa4.9□□□□□ -1.63
SBDSP1-204ENST00000453858 TMCC2O75069 709 aa4.9□□□□□ -1.63
SBDSP1-204ENST00000453858 RBP3P10745 1247 aa4.9□□□□□ -1.63
SBDSP1-204ENST00000453858 PIM1P11309 404 aaPredicted RBP4.9□□□□□ -1.63
SBDSP1-204ENST00000453858 VDRP11473 427 aa4.9□□□□□ -1.63
SBDSP1-204ENST00000453858 ST6GAL1P15907 406 aa4.9□□□□□ -1.63
SBDSP1-204ENST00000453858 IDUAP35475 653 aa4.9□□□□□ -1.63
SBDSP1-204ENST00000453858 PIK3CAP42336 1068 aa4.9□□□□□ -1.63
SBDSP1-204ENST00000453858 GPD2P43304 727 aa4.9□□□□□ -1.63
SBDSP1-204ENST00000453858 RGRP47804 291 aa4.9□□□□□ -1.63
SBDSP1-204ENST00000453858 VSX2P58304 361 aaPredicted RBP4.9□□□□□ -1.63
SBDSP1-204ENST00000453858 CDK17Q00537 523 aa4.9□□□□□ -1.63
SBDSP1-204ENST00000453858 MEF2AQ02078 507 aaPredicted RBP4.9□□□□□ -1.63
SBDSP1-204ENST00000453858 ZNF33BQ06732 778 aa4.9□□□□□ -1.63
SBDSP1-204ENST00000453858 PPP3CAQ08209 521 aa4.9□□□□□ -1.63
SBDSP1-204ENST00000453858 FOXO1Q12778 655 aa4.9□□□□□ -1.63
SBDSP1-204ENST00000453858 GRM3Q14832 879 aa4.9□□□□□ -1.63
SBDSP1-204ENST00000453858 SF3B4Q15427 424 aaKnown RBP eCLIP4.9□□□□□ -1.63
SBDSP1-204ENST00000453858 RBBP7Q16576 425 aa4.9□□□□□ -1.63
SBDSP1-204ENST00000453858 ACER2Q5QJU3 275 aa4.9□□□□□ -1.63
SBDSP1-204ENST00000453858 ARL6IP4Q66PJ3 421 aaKnown RBP4.9□□□□□ -1.63
SBDSP1-204ENST00000453858 SLC25A25Q6KCM7 469 aa4.9□□□□□ -1.63
SBDSP1-204ENST00000453858 KLHL35Q6PF15 583 aa4.9□□□□□ -1.63
SBDSP1-204ENST00000453858 PLEKHM3Q6ZWE6 761 aa4.9□□□□□ -1.63
SBDSP1-204ENST00000453858 ADGRG6Q86SQ4 1221 aa4.9□□□□□ -1.63
SBDSP1-204ENST00000453858 TMEM110Q86TL2 294 aa4.9□□□□□ -1.63
SBDSP1-204ENST00000453858 DNAAF5Q86Y56 855 aa4.9□□□□□ -1.63
SBDSP1-204ENST00000453858 GLB1L2Q8IW92 636 aa4.9□□□□□ -1.63
SBDSP1-204ENST00000453858 DRC7Q8IY82 874 aa4.9□□□□□ -1.63
SBDSP1-204ENST00000453858 DEFB106AQ8N104 65 aa4.9□□□□□ -1.63
SBDSP1-204ENST00000453858 BEST3Q8N1M1 668 aa4.9□□□□□ -1.63
SBDSP1-204ENST00000453858 NECAB1Q8N987 351 aa4.9□□□□□ -1.63
SBDSP1-204ENST00000453858 NAXEQ8NCW5 288 aa4.9□□□□□ -1.63
SBDSP1-204ENST00000453858 FBXO18Q8NFZ0 1043 aa4.9□□□□□ -1.63
SBDSP1-204ENST00000453858 OR5M9Q8NGP3 310 aa4.9□□□□□ -1.63
SBDSP1-204ENST00000453858 GPR150Q8NGU9 434 aa4.9□□□□□ -1.63
SBDSP1-204ENST00000453858 EXD1Q8NHP7 514 aa4.9□□□□□ -1.63
SBDSP1-204ENST00000453858 FATE1Q969F0 183 aa4.9□□□□□ -1.63
SBDSP1-204ENST00000453858 PIGQQ9BRB3 760 aa4.9□□□□□ -1.63
SBDSP1-204ENST00000453858 ANGPTL4Q9BY76 406 aa4.9□□□□□ -1.63
SBDSP1-204ENST00000453858 SLC7A5P2Q9GIP4 190 aa4.9□□□□□ -1.63
SBDSP1-204ENST00000453858 OR10A2Q9H208 303 aa4.9□□□□□ -1.63
SBDSP1-204ENST00000453858 MAGEH1Q9H213 219 aa4.9□□□□□ -1.63
SBDSP1-204ENST00000453858 MS4A5Q9H3V2 200 aa4.9□□□□□ -1.63
SBDSP1-204ENST00000453858 THAP9Q9H5L6 903 aa4.9□□□□□ -1.63
SBDSP1-204ENST00000453858 CATSPERBQ9H7T0 1116 aa4.9□□□□□ -1.63
SBDSP1-204ENST00000453858 FAM204AQ9H8W3 233 aa4.9□□□□□ -1.63
SBDSP1-204ENST00000453858 UBTD1Q9HAC8 227 aa4.9□□□□□ -1.63
SBDSP1-204ENST00000453858 FAM60AQ9NP50 221 aa4.9□□□□□ -1.63
SBDSP1-204ENST00000453858 PIGVQ9NUD9 493 aa4.9□□□□□ -1.63
SBDSP1-204ENST00000453858 PANK4Q9NVE7 773 aa4.9□□□□□ -1.63
SBDSP1-204ENST00000453858 SOHLH2Q9NX45 425 aa4.9□□□□□ -1.63
SBDSP1-204ENST00000453858 MKS1Q9NXB0 559 aa4.9□□□□□ -1.63
SBDSP1-204ENST00000453858 CTSFQ9UBX1 484 aa4.9□□□□□ -1.63
SBDSP1-204ENST00000453858 ZDHHC9Q9Y397 364 aa4.9□□□□□ -1.63
SBDSP1-204ENST00000453858 PLCE1Q9P212 2302 aa4.89□□□□□ -1.63
SBDSP1-204ENST00000453858 SYNJ2BP-COX16A0A087WUM0 186 aa4.89□□□□□ -1.63
SBDSP1-204ENST00000453858 IGHV1-45A0A0A0MS14 117 aa4.89□□□□□ -1.63
SBDSP1-204ENST00000453858 NSG1A0A0A6YYJ2 146 aa4.89□□□□□ -1.63
SBDSP1-204ENST00000453858 EIF3CLB5ME19 914 aaKnown RBP4.89□□□□□ -1.63
SBDSP1-204ENST00000453858 SLCO1B7G3V0H7 640 aa4.89□□□□□ -1.63
SBDSP1-204ENST00000453858 PSMD11O00231 422 aa4.89□□□□□ -1.63
SBDSP1-204ENST00000453858 CHUKO15111 745 aa4.89□□□□□ -1.63
SBDSP1-204ENST00000453858 EXOC3O60645 756 aa4.89□□□□□ -1.63
SBDSP1-204ENST00000453858 SRGAP2O75044 1071 aa4.89□□□□□ -1.63
SBDSP1-204ENST00000453858 PDE9AO76083 593 aa4.89□□□□□ -1.63
SBDSP1-204ENST00000453858 IGHV4-31P0DP07 118 aa4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms