RNA–Protein interactions for RNA: ENST00000449223.3

RPS28-202, Transcript of ribosomal protein S28, humanhuman

TSL 2

Gene RPS28, Length 1,523 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-202ENST00000449223 BTRCQ9Y297 605 aa18.51■□□□□ 0.55
RPS28-202ENST00000449223 TRBC2A0A5B9 178 aa18.5■□□□□ 0.55
RPS28-202ENST00000449223 SLC28A1O00337 649 aa18.5■□□□□ 0.55
RPS28-202ENST00000449223 SLC34A2O95436 690 aa18.5■□□□□ 0.55
RPS28-202ENST00000449223 PDYNP01213 254 aa18.5■□□□□ 0.55
RPS28-202ENST00000449223 LINC00032P0C843 101 aa18.5■□□□□ 0.55
RPS28-202ENST00000449223 CKMT1AP12532 417 aa18.5■□□□□ 0.55
RPS28-202ENST00000449223 TYRP1P17643 537 aa18.5■□□□□ 0.55
RPS28-202ENST00000449223 AMD1P17707 334 aa18.5■□□□□ 0.55
RPS28-202ENST00000449223 GRK6P43250 576 aa18.5■□□□□ 0.55
RPS28-202ENST00000449223 SF3A3Q12874 501 aaKnown RBP eCLIP18.5■□□□□ 0.55
RPS28-202ENST00000449223 INAVAQ3KP66 663 aa18.5■□□□□ 0.55
RPS28-202ENST00000449223 LSM12Q3MHD2 195 aaKnown RBP18.5■□□□□ 0.55
RPS28-202ENST00000449223 OGFOD2Q6N063 350 aa18.5■□□□□ 0.55
RPS28-202ENST00000449223 ARMC6Q6NXE6 501 aa18.5■□□□□ 0.55
RPS28-202ENST00000449223 PAQR7Q86WK9 346 aa18.5■□□□□ 0.55
RPS28-202ENST00000449223 EID2Q8N6I1 236 aa18.5■□□□□ 0.55
RPS28-202ENST00000449223 METTL2AQ96IZ6 378 aaKnown RBP18.5■□□□□ 0.55
RPS28-202ENST00000449223 CD180Q99467 661 aa18.5■□□□□ 0.55
RPS28-202ENST00000449223 ABCG4Q9H172 646 aa18.5■□□□□ 0.55
RPS28-202ENST00000449223 RIC8BQ9NVN3 520 aa18.5■□□□□ 0.55
RPS28-202ENST00000449223 PTGDR2Q9Y5Y4 395 aa18.5■□□□□ 0.55
RPS28-202ENST00000449223 CDX4O14627 284 aaPredicted RBP18.49■□□□□ 0.55
RPS28-202ENST00000449223 FLRT2O43155 660 aa18.49■□□□□ 0.55
RPS28-202ENST00000449223 ZW10O43264 779 aa18.49■□□□□ 0.55
RPS28-202ENST00000449223 LMNAP02545 664 aaKnown RBP18.49■□□□□ 0.55
RPS28-202ENST00000449223 CSRP2Q16527 193 aa18.49■□□□□ 0.55
RPS28-202ENST00000449223 SMU1Q2TAY7 513 aa18.49■□□□□ 0.55
RPS28-202ENST00000449223 CHSY3Q70JA7 882 aa18.49■□□□□ 0.55
RPS28-202ENST00000449223 SPRED1Q7Z699 444 aa18.49■□□□□ 0.55
RPS28-202ENST00000449223 ZNF740Q8NDX6 193 aa18.49■□□□□ 0.55
RPS28-202ENST00000449223 TTLQ8NG68 377 aa18.49■□□□□ 0.55
RPS28-202ENST00000449223 OR2T11Q8NH01 316 aa18.49■□□□□ 0.55
RPS28-202ENST00000449223 HUS1BQ8NHY5 278 aa18.49■□□□□ 0.55
RPS28-202ENST00000449223 ATOH1Q92858 354 aaPredicted RBP18.49■□□□□ 0.55
RPS28-202ENST00000449223 ACPTQ9BZG2 426 aa18.49■□□□□ 0.55
RPS28-202ENST00000449223 AKTIPQ9H8T0 292 aa18.49■□□□□ 0.55
RPS28-202ENST00000449223 EVA1BQ9NVM1 165 aa18.49■□□□□ 0.55
RPS28-202ENST00000449223 RP1P56715 2156 aa18.49■□□□□ 0.55
RPS28-202ENST00000449223 MDC1Q14676 2089 aaKnown RBP18.49■□□□□ 0.55
RPS28-202ENST00000449223 ASXL3Q9C0F0 2248 aa18.49■□□□□ 0.55
RPS28-202ENST00000449223 LSM1O15116 133 aaKnown RBP18.49■□□□□ 0.55
RPS28-202ENST00000449223 B4GAT1O43505 415 aa18.49■□□□□ 0.55
RPS28-202ENST00000449223 DUX1O43812 170 aa18.49■□□□□ 0.55
RPS28-202ENST00000449223 DCTN3O75935 186 aa18.49■□□□□ 0.55
RPS28-202ENST00000449223 RSL1D1O76021 490 aaKnown RBP18.49■□□□□ 0.55
RPS28-202ENST00000449223 EZRP15311 586 aaKnown RBP18.49■□□□□ 0.55
RPS28-202ENST00000449223 MAGP20916 626 aa18.49■□□□□ 0.55
RPS28-202ENST00000449223 GRK3P35626 688 aa18.49■□□□□ 0.55
RPS28-202ENST00000449223 AHRP35869 848 aa18.49■□□□□ 0.55
RPS28-202ENST00000449223 SCTRP47872 440 aa18.49■□□□□ 0.55
RPS28-202ENST00000449223 LSSP48449 732 aa18.49■□□□□ 0.55
RPS28-202ENST00000449223 MEF2AQ02078 507 aaPredicted RBP18.49■□□□□ 0.55
RPS28-202ENST00000449223 WDR74Q6RFH5 385 aaPredicted RBP18.49■□□□□ 0.55
RPS28-202ENST00000449223 ANKRD53Q8N9V6 530 aa18.49■□□□□ 0.55
RPS28-202ENST00000449223 BAHD1Q8TBE0 780 aaPredicted RBP18.49■□□□□ 0.55
RPS28-202ENST00000449223 CCT6BQ92526 530 aa18.49■□□□□ 0.55
RPS28-202ENST00000449223 PPP1R36Q96LQ0 422 aa18.49■□□□□ 0.55
RPS28-202ENST00000449223 RILPQ96NA2 401 aa18.49■□□□□ 0.55
RPS28-202ENST00000449223 CHRNA10Q9GZZ6 450 aa18.49■□□□□ 0.55
RPS28-202ENST00000449223 SEMA6CQ9H3T2 930 aa18.49■□□□□ 0.55
RPS28-202ENST00000449223 C1GALT1Q9NS00 363 aa18.49■□□□□ 0.55
RPS28-202ENST00000449223 SEMA4GQ9NTN9 838 aa18.49■□□□□ 0.55
RPS28-202ENST00000449223 SEMA5BQ9P283 1151 aa18.49■□□□□ 0.55
RPS28-202ENST00000449223 MN1Q10571 1320 aaPredicted RBP18.48■□□□□ 0.55
RPS28-202ENST00000449223 GOLGA8QA0A0J9YX86 632 aa18.48■□□□□ 0.55
RPS28-202ENST00000449223 ATP6AP2A0A1C7CYW4 349 aa18.48■□□□□ 0.55
RPS28-202ENST00000449223 GOLGA8OA6NCC3 632 aa18.48■□□□□ 0.55
RPS28-202ENST00000449223 GOLGA8NF8WBI6 632 aa18.48■□□□□ 0.55
RPS28-202ENST00000449223 RGS14O43566 566 aa18.48■□□□□ 0.55
RPS28-202ENST00000449223 ATP6AP2O75787 350 aa18.48■□□□□ 0.55
RPS28-202ENST00000449223 C9P02748 559 aa18.48■□□□□ 0.55
RPS28-202ENST00000449223 DUSP3P51452 185 aaPredicted RBP18.48■□□□□ 0.55
RPS28-202ENST00000449223 NEK2P51955 445 aa18.48■□□□□ 0.55
RPS28-202ENST00000449223 PPP1CAP62136 330 aa18.48■□□□□ 0.55
RPS28-202ENST00000449223 IRX1P78414 480 aaPredicted RBP18.48■□□□□ 0.55
RPS28-202ENST00000449223 SF3A2Q15428 464 aaKnown RBP18.48■□□□□ 0.55
RPS28-202ENST00000449223 FCRL6Q6DN72 434 aa18.48■□□□□ 0.55
RPS28-202ENST00000449223 GUSBP11Q6P575 273 aa18.48■□□□□ 0.55
RPS28-202ENST00000449223 VN1R5Q7Z5H4 357 aa18.48■□□□□ 0.55
RPS28-202ENST00000449223 FAM20CQ8IXL6 584 aa18.48■□□□□ 0.55
RPS28-202ENST00000449223 TBC1D19Q8N5T2 526 aa18.48■□□□□ 0.55
RPS28-202ENST00000449223 CCDC74AQ96AQ1 378 aa18.48■□□□□ 0.55
RPS28-202ENST00000449223 TUBGCP3Q96CW5 907 aa18.48■□□□□ 0.55
RPS28-202ENST00000449223 ZDHHC12Q96GR4 267 aa18.48■□□□□ 0.55
RPS28-202ENST00000449223 HBEGFQ99075 208 aa18.48■□□□□ 0.55
RPS28-202ENST00000449223 DMRT3Q9NQL9 472 aa18.48■□□□□ 0.55
RPS28-202ENST00000449223 HEY2Q9UBP5 337 aa18.48■□□□□ 0.55
RPS28-202ENST00000449223 TRIM33Q9UPN9 1127 aa18.48■□□□□ 0.55
RPS28-202ENST00000449223 TLCD2A6NGC4 264 aa18.47■□□□□ 0.55
RPS28-202ENST00000449223 MAGEB17A8MXT2 336 aa18.47■□□□□ 0.55
RPS28-202ENST00000449223 HAT1O14929 419 aa18.47■□□□□ 0.55
RPS28-202ENST00000449223 FOXD2O60548 495 aaPredicted RBP18.47■□□□□ 0.55
RPS28-202ENST00000449223 SERPINA6P08185 405 aa18.47■□□□□ 0.55
RPS28-202ENST00000449223 CD1CP29017 333 aa18.47■□□□□ 0.55
RPS28-202ENST00000449223 ALDH4A1P30038 563 aa18.47■□□□□ 0.55
RPS28-202ENST00000449223 OR1D5P58170 312 aa18.47■□□□□ 0.55
RPS28-202ENST00000449223 RPS15AP62244 130 aaKnown RBP18.47■□□□□ 0.55
RPS28-202ENST00000449223 PHEXP78562 749 aa18.47■□□□□ 0.55
RPS28-202ENST00000449223 C6orf136Q5SQH8 315 aa18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms