RNA–Protein interactions for RNA: ENST00000447654.5

HMGA1-205, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HMGA1, Length 2,159 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-205ENST00000447654 UROSP10746 265 aa18.61■□□□□ 0.57
HMGA1-205ENST00000447654 RPL34P49207 117 aaKnown RBP18.61■□□□□ 0.57
HMGA1-205ENST00000447654 TAF6P49848 677 aa18.61■□□□□ 0.57
HMGA1-205ENST00000447654 RAB14P61106 215 aa18.61■□□□□ 0.57
HMGA1-205ENST00000447654 RPP38P78345 283 aaKnown RBP18.61■□□□□ 0.57
HMGA1-205ENST00000447654 NPRL3Q12980 569 aa18.61■□□□□ 0.57
HMGA1-205ENST00000447654 C10orf62Q5T681 223 aaPredicted RBP18.61■□□□□ 0.57
HMGA1-205ENST00000447654 TFAP2EQ6VUC0 442 aa18.61■□□□□ 0.57
HMGA1-205ENST00000447654 PAQR9Q6ZVX9 377 aa18.61■□□□□ 0.57
HMGA1-205ENST00000447654 FAM124AQ86V42 546 aa18.61■□□□□ 0.57
HMGA1-205ENST00000447654 ZSWIM9Q86XI8 627 aa18.61■□□□□ 0.57
HMGA1-205ENST00000447654 PGBD3Q8N328 593 aa18.61■□□□□ 0.57
HMGA1-205ENST00000447654 EFHBQ8N7U6 833 aa18.61■□□□□ 0.57
HMGA1-205ENST00000447654 ANKRD49Q8WVL7 239 aa18.61■□□□□ 0.57
HMGA1-205ENST00000447654 SGTBQ96EQ0 304 aa18.61■□□□□ 0.57
HMGA1-205ENST00000447654 TRMT61AQ96FX7 289 aaKnown RBP18.61■□□□□ 0.57
HMGA1-205ENST00000447654 TBL1YQ9BQ87 522 aa18.61■□□□□ 0.57
HMGA1-205ENST00000447654 PELOQ9BRX2 385 aaKnown RBP18.61■□□□□ 0.57
HMGA1-205ENST00000447654 MARVELD1Q9BSK0 173 aa18.61■□□□□ 0.57
HMGA1-205ENST00000447654 GABARAPL3Q9BY60 117 aa18.61■□□□□ 0.57
HMGA1-205ENST00000447654 ARHGAP39Q9C0H5 1083 aa18.61■□□□□ 0.57
HMGA1-205ENST00000447654 SHARPINQ9H0F6 387 aa18.61■□□□□ 0.57
HMGA1-205ENST00000447654 RACGAP1Q9H0H5 632 aa18.61■□□□□ 0.57
HMGA1-205ENST00000447654 PPIL3Q9H2H8 161 aaKnown RBP18.61■□□□□ 0.57
HMGA1-205ENST00000447654 TMPRSS4Q9NRS4 437 aa18.61■□□□□ 0.57
HMGA1-205ENST00000447654 PCDHGB3Q9Y5G1 929 aa18.61■□□□□ 0.57
HMGA1-205ENST00000447654 RNF215Q9Y6U7 377 aa18.61■□□□□ 0.57
HMGA1-205ENST00000447654 PLA2G10O15496 165 aa18.61■□□□□ 0.57
HMGA1-205ENST00000447654 SLC7A4O43246 635 aa18.61■□□□□ 0.57
HMGA1-205ENST00000447654 BMP8BP34820 402 aa18.61■□□□□ 0.57
HMGA1-205ENST00000447654 ALDH9A1P49189 494 aa18.61■□□□□ 0.57
HMGA1-205ENST00000447654 AIF1P55008 147 aa18.61■□□□□ 0.57
HMGA1-205ENST00000447654 GPR85P60893 370 aa18.61■□□□□ 0.57
HMGA1-205ENST00000447654 DAB2P98082 770 aa18.61■□□□□ 0.57
HMGA1-205ENST00000447654 FLI1Q01543 452 aaPredicted RBP18.61■□□□□ 0.57
HMGA1-205ENST00000447654 ZNF33AQ06730 810 aa18.61■□□□□ 0.57
HMGA1-205ENST00000447654 PPP1R8Q12972 351 aaKnown RBP18.61■□□□□ 0.57
HMGA1-205ENST00000447654 IRF5Q13568 498 aa18.61■□□□□ 0.57
HMGA1-205ENST00000447654 ALFQ53S48 1182 aa18.61■□□□□ 0.57
HMGA1-205ENST00000447654 CXCL17Q6UXB2 119 aa18.61■□□□□ 0.57
HMGA1-205ENST00000447654 BNIPLQ7Z465 357 aa18.61■□□□□ 0.57
HMGA1-205ENST00000447654 BMP8AQ7Z5Y6 402 aa18.61■□□□□ 0.57
HMGA1-205ENST00000447654 ATCAYQ86WG3 371 aa18.61■□□□□ 0.57
HMGA1-205ENST00000447654 C1orf52Q8N6N3 182 aaKnown RBP18.61■□□□□ 0.57
HMGA1-205ENST00000447654 LPCAT1Q8NF37 534 aa18.61■□□□□ 0.57
HMGA1-205ENST00000447654 RASSF1Q9NS23 344 aa18.61■□□□□ 0.57
HMGA1-205ENST00000447654 UBQLN2Q9UHD9 624 aa18.61■□□□□ 0.57
HMGA1-205ENST00000447654 STON1Q9Y6Q2 735 aa18.61■□□□□ 0.57
HMGA1-205ENST00000447654 CIB4A0PJX0 185 aa18.6■□□□□ 0.57
HMGA1-205ENST00000447654 YKT6O15498 198 aa18.6■□□□□ 0.57
HMGA1-205ENST00000447654 COL6A1P12109 1028 aa18.6■□□□□ 0.57
HMGA1-205ENST00000447654 ZNF37AP17032 561 aaPredicted RBP18.6■□□□□ 0.57
HMGA1-205ENST00000447654 SLC19A1P41440 591 aa18.6■□□□□ 0.57
HMGA1-205ENST00000447654 NDUFV1P49821 464 aa18.6■□□□□ 0.57
HMGA1-205ENST00000447654 CRHR2Q13324 411 aa18.6■□□□□ 0.57
HMGA1-205ENST00000447654 SLC25A52Q3SY17 297 aa18.6■□□□□ 0.57
HMGA1-205ENST00000447654 ATG9BQ674R7 924 aa18.6■□□□□ 0.57
HMGA1-205ENST00000447654 ANKRD54Q6NXT1 300 aa18.6■□□□□ 0.57
HMGA1-205ENST00000447654 FAHD1Q6P587 224 aa18.6■□□□□ 0.57
HMGA1-205ENST00000447654 FAM131AQ6UXB0 335 aa18.6■□□□□ 0.57
HMGA1-205ENST00000447654 METTL3Q86U44 580 aaKnown RBP18.6■□□□□ 0.57
HMGA1-205ENST00000447654 ZDHHC21Q8IVQ6 265 aa18.6■□□□□ 0.57
HMGA1-205ENST00000447654 GPR152Q8TDT2 470 aa18.6■□□□□ 0.57
HMGA1-205ENST00000447654 SMG7Q92540 1137 aaKnown RBP18.6■□□□□ 0.57
HMGA1-205ENST00000447654 LPPQ93052 612 aa18.6■□□□□ 0.57
HMGA1-205ENST00000447654 AHCYL2Q96HN2 611 aaKnown RBP18.6■□□□□ 0.57
HMGA1-205ENST00000447654 MCOLN1Q9GZU1 580 aa18.6■□□□□ 0.57
HMGA1-205ENST00000447654 LDAHQ9H6V9 325 aa18.6■□□□□ 0.57
HMGA1-205ENST00000447654 POLMQ9NP87 494 aaPredicted RBP18.6■□□□□ 0.57
HMGA1-205ENST00000447654 MICAL3Q7RTP6 2002 aa18.6■□□□□ 0.57
HMGA1-205ENST00000447654 PITPNM1O00562 1244 aa18.59■□□□□ 0.57
HMGA1-205ENST00000447654 HRO43593 1189 aa18.59■□□□□ 0.57
HMGA1-205ENST00000447654 SULT1B1O43704 296 aa18.59■□□□□ 0.57
HMGA1-205ENST00000447654 DPM1O60762 260 aa18.59■□□□□ 0.57
HMGA1-205ENST00000447654 ITGB1P05556 798 aa18.59■□□□□ 0.57
HMGA1-205ENST00000447654 CTSHP09668 335 aa18.59■□□□□ 0.57
HMGA1-205ENST00000447654 POLR2GP62487 172 aaKnown RBP eCLIP18.59■□□□□ 0.57
HMGA1-205ENST00000447654 LARS2Q15031 903 aaKnown RBP18.59■□□□□ 0.57
HMGA1-205ENST00000447654 INO80DQ53TQ3 878 aaPredicted RBP18.59■□□□□ 0.57
HMGA1-205ENST00000447654 WSCD1Q658N2 575 aa18.59■□□□□ 0.57
HMGA1-205ENST00000447654 KDELC1Q6UW63 502 aa18.59■□□□□ 0.57
HMGA1-205ENST00000447654 NLRP8Q86W28 1048 aa18.59■□□□□ 0.57
HMGA1-205ENST00000447654 NETO2Q8NC67 525 aa18.59■□□□□ 0.57
HMGA1-205ENST00000447654 DNAJB8Q8NHS0 232 aa18.59■□□□□ 0.57
HMGA1-205ENST00000447654 QRFPRQ96P65 431 aa18.59■□□□□ 0.57
HMGA1-205ENST00000447654 KCNA7Q96RP8 456 aa18.59■□□□□ 0.57
HMGA1-205ENST00000447654 CDCA4Q9BXL8 241 aa18.59■□□□□ 0.57
HMGA1-205ENST00000447654 ASPNQ9BXN1 380 aa18.59■□□□□ 0.57
HMGA1-205ENST00000447654 MCUBQ9NWR8 336 aa18.59■□□□□ 0.57
HMGA1-205ENST00000447654 MIOSQ9NXC5 875 aa18.59■□□□□ 0.57
HMGA1-205ENST00000447654 VNN3Q9NY84 501 aa18.59■□□□□ 0.57
HMGA1-205ENST00000447654 ZNF638Q14966 1978 aaKnown RBP18.59■□□□□ 0.57
HMGA1-205ENST00000447654 ANXA9O76027 345 aa18.59■□□□□ 0.57
HMGA1-205ENST00000447654 AZGP1P25311 298 aaKnown RBP18.59■□□□□ 0.57
HMGA1-205ENST00000447654 MATKP42679 507 aa18.59■□□□□ 0.57
HMGA1-205ENST00000447654 ERVK-21P61565 698 aa18.59■□□□□ 0.57
HMGA1-205ENST00000447654 C6orf136Q5SQH8 315 aa18.59■□□□□ 0.57
HMGA1-205ENST00000447654 OTUD1Q5VV17 481 aaPredicted RBP18.59■□□□□ 0.57
HMGA1-205ENST00000447654 GDF6Q6KF10 455 aaPredicted RBP18.59■□□□□ 0.57
HMGA1-205ENST00000447654 RETSATQ6NUM9 610 aa18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms