RNA–Protein interactions for RNA: ENST00000447182.6

SDCBP-204, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SDCBP, Length 2,103 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-204ENST00000447182 CDH18Q13634 790 aa18.47■□□□□ 0.55
SDCBP-204ENST00000447182 MAPK11Q15759 364 aa18.47■□□□□ 0.55
SDCBP-204ENST00000447182 PDE12Q6L8Q7 609 aaKnown RBP18.47■□□□□ 0.55
SDCBP-204ENST00000447182 TMEM53Q6P2H8 277 aa18.47■□□□□ 0.55
SDCBP-204ENST00000447182 COPS8Q99627 209 aa18.47■□□□□ 0.55
SDCBP-204ENST00000447182 DPH2Q9BQC3 489 aaPredicted RBP18.47■□□□□ 0.55
SDCBP-204ENST00000447182 TMEM175Q9BSA9 504 aa18.47■□□□□ 0.55
SDCBP-204ENST00000447182 CHST8Q9H2A9 424 aa18.47■□□□□ 0.55
SDCBP-204ENST00000447182 ZBTB20Q9HC78 741 aaPredicted RBP18.47■□□□□ 0.55
SDCBP-204ENST00000447182 DNAJC11Q9NVH1 559 aa18.47■□□□□ 0.55
SDCBP-204ENST00000447182 AFF4Q9UHB7 1163 aaKnown RBP18.47■□□□□ 0.55
SDCBP-204ENST00000447182 ZNF229Q9UJW7 825 aa18.47■□□□□ 0.55
SDCBP-204ENST00000447182 PADI2Q9Y2J8 665 aa18.47■□□□□ 0.55
SDCBP-204ENST00000447182 ANAPC1Q9H1A4 1944 aa18.47■□□□□ 0.55
SDCBP-204ENST00000447182 MPC1LP0DKB6 136 aa18.46■□□□□ 0.55
SDCBP-204ENST00000447182 PABPC1P11940 636 aaKnown RBP18.46■□□□□ 0.55
SDCBP-204ENST00000447182 COX7A2P14406 83 aa18.46■□□□□ 0.55
SDCBP-204ENST00000447182 CTSKP43235 329 aa18.46■□□□□ 0.55
SDCBP-204ENST00000447182 FPGSQ05932 587 aa18.46■□□□□ 0.55
SDCBP-204ENST00000447182 SELENBP1Q13228 472 aa18.46■□□□□ 0.55
SDCBP-204ENST00000447182 SP140Q13342 867 aa18.46■□□□□ 0.55
SDCBP-204ENST00000447182 USP43Q70EL4 1123 aa18.46■□□□□ 0.55
SDCBP-204ENST00000447182 TSPAN33Q86UF1 283 aa18.46■□□□□ 0.55
SDCBP-204ENST00000447182 PAF1Q8N7H5 531 aa18.46■□□□□ 0.55
SDCBP-204ENST00000447182 MYDGFQ969H8 173 aa18.46■□□□□ 0.55
SDCBP-204ENST00000447182 TPT1P8Q9HAU6 139 aa18.46■□□□□ 0.55
SDCBP-204ENST00000447182 SLC16A5O15375 505 aa18.46■□□□□ 0.55
SDCBP-204ENST00000447182 GKP32189 559 aa18.46■□□□□ 0.55
SDCBP-204ENST00000447182 OR1D2P34982 312 aa18.46■□□□□ 0.55
SDCBP-204ENST00000447182 GGT2P36268 569 aa18.46■□□□□ 0.55
SDCBP-204ENST00000447182 ACLYP53396 1101 aa18.46■□□□□ 0.55
SDCBP-204ENST00000447182 CRYBA2P53672 197 aa18.46■□□□□ 0.55
SDCBP-204ENST00000447182 SYT16Q17RD7 645 aa18.46■□□□□ 0.55
SDCBP-204ENST00000447182 PRSS36Q5K4E3 855 aa18.46■□□□□ 0.55
SDCBP-204ENST00000447182 FAM124AQ86V42 546 aa18.46■□□□□ 0.55
SDCBP-204ENST00000447182 APCDD1Q8J025 514 aa18.46■□□□□ 0.55
SDCBP-204ENST00000447182 BCL7CQ8WUZ0 217 aaPredicted RBP18.46■□□□□ 0.55
SDCBP-204ENST00000447182 STARD8Q92502 1023 aa18.46■□□□□ 0.55
SDCBP-204ENST00000447182 TRMT2BQ96GJ1 504 aaKnown RBP18.46■□□□□ 0.55
SDCBP-204ENST00000447182 TXNDC15Q96J42 360 aa18.46■□□□□ 0.55
SDCBP-204ENST00000447182 EBPLQ9BY08 206 aa18.46■□□□□ 0.55
SDCBP-204ENST00000447182 ARHGAP39Q9C0H5 1083 aa18.46■□□□□ 0.55
SDCBP-204ENST00000447182 SLCO3A1Q9UIG8 710 aa18.46■□□□□ 0.55
SDCBP-204ENST00000447182 SLC22A14Q9Y267 594 aa18.46■□□□□ 0.55
SDCBP-204ENST00000447182 NPIPB15A6NHN6 443 aaPredicted RBP18.45■□□□□ 0.54
SDCBP-204ENST00000447182 GFYI3L273 518 aa18.45■□□□□ 0.54
SDCBP-204ENST00000447182 UGDHO60701 494 aa18.45■□□□□ 0.54
SDCBP-204ENST00000447182 RFPL2O75678 378 aa18.45■□□□□ 0.54
SDCBP-204ENST00000447182 OR56A5P0C7T3 313 aa18.45■□□□□ 0.54
SDCBP-204ENST00000447182 KCNJ8Q15842 424 aa18.45■□□□□ 0.54
SDCBP-204ENST00000447182 TIGD6Q17RP2 521 aa18.45■□□□□ 0.54
SDCBP-204ENST00000447182 SLC46A3Q7Z3Q1 461 aa18.45■□□□□ 0.54
SDCBP-204ENST00000447182 ZSWIM9Q86XI8 627 aa18.45■□□□□ 0.54
SDCBP-204ENST00000447182 DNAJC22Q8N4W6 341 aa18.45■□□□□ 0.54
SDCBP-204ENST00000447182 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP18.45■□□□□ 0.54
SDCBP-204ENST00000447182 CORO2BQ9UQ03 480 aa18.45■□□□□ 0.54
SDCBP-204ENST00000447182 CLCA1A8K7I4 914 aa18.44■□□□□ 0.54
SDCBP-204ENST00000447182 SUV39H1O43463 412 aa18.44■□□□□ 0.54
SDCBP-204ENST00000447182 CPSF4O95639 269 aaKnown RBP18.44■□□□□ 0.54
SDCBP-204ENST00000447182 CDK1P06493 297 aa18.44■□□□□ 0.54
SDCBP-204ENST00000447182 ABCB1P08183 1280 aaPredicted RBP18.44■□□□□ 0.54
SDCBP-204ENST00000447182 RPL17P18621 184 aaKnown RBP18.44■□□□□ 0.54
SDCBP-204ENST00000447182 PPIBP23284 216 aaKnown RBP18.44■□□□□ 0.54
SDCBP-204ENST00000447182 C21orf33P30042 268 aaPredicted RBP18.44■□□□□ 0.54
SDCBP-204ENST00000447182 AP1S2P56377 157 aa18.44■□□□□ 0.54
SDCBP-204ENST00000447182 SMAD3P84022 425 aaKnown RBP18.44■□□□□ 0.54
SDCBP-204ENST00000447182 TEKQ02763 1124 aa18.44■□□□□ 0.54
SDCBP-204ENST00000447182 CHIT1Q13231 466 aa18.44■□□□□ 0.54
SDCBP-204ENST00000447182 ATP13A5Q4VNC0 1218 aa18.44■□□□□ 0.54
SDCBP-204ENST00000447182 LIPJQ5W064 366 aa18.44■□□□□ 0.54
SDCBP-204ENST00000447182 CRTC1Q6UUV9 634 aa18.44■□□□□ 0.54
SDCBP-204ENST00000447182 CLECL1Q8IZS7 167 aa18.44■□□□□ 0.54
SDCBP-204ENST00000447182 AMER2Q8N7J2 671 aa18.44■□□□□ 0.54
SDCBP-204ENST00000447182 C11orf24Q96F05 449 aaPredicted RBP18.44■□□□□ 0.54
SDCBP-204ENST00000447182 METTL2AQ96IZ6 378 aaKnown RBP18.44■□□□□ 0.54
SDCBP-204ENST00000447182 TPD52L3Q96J77 140 aa18.44■□□□□ 0.54
SDCBP-204ENST00000447182 RAD9AQ99638 391 aa18.44■□□□□ 0.54
SDCBP-204ENST00000447182 ABCB10Q9NRK6 738 aa18.44■□□□□ 0.54
SDCBP-204ENST00000447182 ADPRHL2Q9NX46 363 aa18.44■□□□□ 0.54
SDCBP-204ENST00000447182 VPS29Q9UBQ0 182 aa18.44■□□□□ 0.54
SDCBP-204ENST00000447182 RUVBL1Q9Y265 456 aaKnown RBP18.44■□□□□ 0.54
SDCBP-204ENST00000447182 BACE2Q9Y5Z0 518 aa18.44■□□□□ 0.54
SDCBP-204ENST00000447182 A8MX80 341 aa18.44■□□□□ 0.54
SDCBP-204ENST00000447182 TMEM229AB2RXF0 380 aa18.44■□□□□ 0.54
SDCBP-204ENST00000447182 YY2O15391 372 aa18.44■□□□□ 0.54
SDCBP-204ENST00000447182 GREM1O60565 184 aa18.44■□□□□ 0.54
SDCBP-204ENST00000447182 GADD45AP24522 165 aa18.44■□□□□ 0.54
SDCBP-204ENST00000447182 SERPINA4P29622 427 aa18.44■□□□□ 0.54
SDCBP-204ENST00000447182 ZNF45Q02386 682 aa18.44■□□□□ 0.54
SDCBP-204ENST00000447182 PRKCDQ05655 676 aa18.44■□□□□ 0.54
SDCBP-204ENST00000447182 HSPA14Q0VDF9 509 aa18.44■□□□□ 0.54
SDCBP-204ENST00000447182 SLC13A2Q13183 592 aa18.44■□□□□ 0.54
SDCBP-204ENST00000447182 FBXO43Q4G163 708 aa18.44■□□□□ 0.54
SDCBP-204ENST00000447182 GPR153Q6NV75 609 aa18.44■□□□□ 0.54
SDCBP-204ENST00000447182 TPRG1Q6ZUI0 275 aa18.44■□□□□ 0.54
SDCBP-204ENST00000447182 ABCG8Q9H221 673 aa18.44■□□□□ 0.54
SDCBP-204ENST00000447182 NMRK2Q9NPI5 230 aa18.44■□□□□ 0.54
SDCBP-204ENST00000447182 SPATA6Q9NWH7 488 aaPredicted RBP18.44■□□□□ 0.54
SDCBP-204ENST00000447182 CCDC59Q9P031 241 aaKnown RBP18.44■□□□□ 0.54
SDCBP-204ENST00000447182 SPASTQ9UBP0 616 aa18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms