RNA–Protein interactions for RNA: ENST00000444896.1

HMGB3P6-201, Transcript of high mobility group box 3 pseudogene 6, humanhuman

BASIC

Gene HMGB3P6, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P6-201ENST00000444896 XKR6Q5GH73 641 aa4.02□□□□□ -1.77
HMGB3P6-201ENST00000444896 FFAR4Q5NUL3 377 aa4.02□□□□□ -1.77
HMGB3P6-201ENST00000444896 ARHGAP11AQ6P4F7 1023 aa4.02□□□□□ -1.77
HMGB3P6-201ENST00000444896 ABI3BPQ7Z7G0 1075 aa4.02□□□□□ -1.77
HMGB3P6-201ENST00000444896 LGI2Q8N0V4 545 aa4.02□□□□□ -1.77
HMGB3P6-201ENST00000444896 OR10Q1Q8NGQ4 319 aa4.02□□□□□ -1.77
HMGB3P6-201ENST00000444896 OCC1Q8TAD7 63 aa4.02□□□□□ -1.77
HMGB3P6-201ENST00000444896 SPATA33Q96N06 139 aa4.02□□□□□ -1.77
HMGB3P6-201ENST00000444896 EGFL8Q99944 293 aa4.02□□□□□ -1.77
HMGB3P6-201ENST00000444896 PIGQQ9BRB3 760 aa4.02□□□□□ -1.77
HMGB3P6-201ENST00000444896 ATP13A3Q9H7F0 1226 aa4.02□□□□□ -1.77
HMGB3P6-201ENST00000444896 FAM207AQ9NSI2 230 aaPredicted RBP4.02□□□□□ -1.77
HMGB3P6-201ENST00000444896 NLRP1Q9C000 1473 aa4.02□□□□□ -1.77
HMGB3P6-201ENST00000444896 FAM135BQ49AJ0 1406 aa4.02□□□□□ -1.77
HMGB3P6-201ENST00000444896 EDC4Q6P2E9 1401 aaKnown RBP4.02□□□□□ -1.77
HMGB3P6-201ENST00000444896 KIF13AQ9H1H9 1805 aa4.02□□□□□ -1.77
HMGB3P6-201ENST00000444896 TNRQ92752 1358 aa4.02□□□□□ -1.77
HMGB3P6-201ENST00000444896 ITSN1Q15811 1721 aa4.01□□□□□ -1.77
HMGB3P6-201ENST00000444896 IL16Q14005 1332 aa4.01□□□□□ -1.77
HMGB3P6-201ENST00000444896 CD163L1Q9NR16 1453 aa4.01□□□□□ -1.77
HMGB3P6-201ENST00000444896 ANXA2P2A6NMY6 339 aa4.01□□□□□ -1.77
HMGB3P6-201ENST00000444896 ARPC2O15144 300 aa4.01□□□□□ -1.77
HMGB3P6-201ENST00000444896 CSTF2P33240 577 aaKnown RBP eCLIP4.01□□□□□ -1.77
HMGB3P6-201ENST00000444896 GMPSP49915 693 aaPredicted RBP4.01□□□□□ -1.77
HMGB3P6-201ENST00000444896 ALDH3A2P51648 485 aa4.01□□□□□ -1.77
HMGB3P6-201ENST00000444896 HERV-K104P61576 105 aa4.01□□□□□ -1.77
HMGB3P6-201ENST00000444896 DLK1P80370 383 aa4.01□□□□□ -1.77
HMGB3P6-201ENST00000444896 SP3Q02447 781 aa4.01□□□□□ -1.77
HMGB3P6-201ENST00000444896 RASGEF1BQ0VAM2 473 aa4.01□□□□□ -1.77
HMGB3P6-201ENST00000444896 LACTB2Q53H82 288 aaPredicted RBP4.01□□□□□ -1.77
HMGB3P6-201ENST00000444896 SLC35D3Q5M8T2 416 aa4.01□□□□□ -1.77
HMGB3P6-201ENST00000444896 SUSD4Q5VX71 490 aa4.01□□□□□ -1.77
HMGB3P6-201ENST00000444896 ADCK2Q7Z695 626 aa4.01□□□□□ -1.77
HMGB3P6-201ENST00000444896 GLRX5Q86SX6 157 aa4.01□□□□□ -1.77
HMGB3P6-201ENST00000444896 VSIG1Q86XK7 387 aa4.01□□□□□ -1.77
HMGB3P6-201ENST00000444896 KIRREL3Q8IZU9 778 aa4.01□□□□□ -1.77
HMGB3P6-201ENST00000444896 MARVELD2Q8N4S9 558 aa4.01□□□□□ -1.77
HMGB3P6-201ENST00000444896 RASGEF1AQ8N9B8 481 aa4.01□□□□□ -1.77
HMGB3P6-201ENST00000444896 IQUBQ8NA54 791 aa4.01□□□□□ -1.77
HMGB3P6-201ENST00000444896 PROX1Q92786 737 aa4.01□□□□□ -1.77
HMGB3P6-201ENST00000444896 RMDN2Q96LZ7 410 aa4.01□□□□□ -1.77
HMGB3P6-201ENST00000444896 RAB3IPQ96QF0 476 aaPredicted RBP4.01□□□□□ -1.77
HMGB3P6-201ENST00000444896 CDK19Q9BWU1 502 aa4.01□□□□□ -1.77
HMGB3P6-201ENST00000444896 EDEM3Q9BZQ6 932 aa4.01□□□□□ -1.77
HMGB3P6-201ENST00000444896 SCRT2Q9NQ03 307 aa4.01□□□□□ -1.77
HMGB3P6-201ENST00000444896 GSN-AS1Q9NRJ2 163 aa4.01□□□□□ -1.77
HMGB3P6-201ENST00000444896 TMEM181Q9P2C4 612 aa4.01□□□□□ -1.77
HMGB3P6-201ENST00000444896 FRMD4AQ9P2Q2 1039 aaPredicted RBP4.01□□□□□ -1.77
HMGB3P6-201ENST00000444896 ERRFI1Q9UJM3 462 aaPredicted RBP4.01□□□□□ -1.77
HMGB3P6-201ENST00000444896 ANAPC5Q9UJX4 755 aa4.01□□□□□ -1.77
HMGB3P6-201ENST00000444896 PYGO1Q9Y3Y4 419 aa4.01□□□□□ -1.77
HMGB3P6-201ENST00000444896 NRXN3Q9Y4C0 1643 aa4.01□□□□□ -1.77
HMGB3P6-201ENST00000444896 TECPR2O15040 1411 aa4.01□□□□□ -1.77
HMGB3P6-201ENST00000444896 PPIP5K1Q6PFW1 1433 aa4.01□□□□□ -1.77
HMGB3P6-201ENST00000444896 LRRC7Q96NW7 1537 aa4□□□□□ -1.77
HMGB3P6-201ENST00000444896 VIRMAQ69YN4 1812 aaKnown RBP4□□□□□ -1.77
HMGB3P6-201ENST00000444896 KIF16BQ96L93 1317 aa4□□□□□ -1.77
HMGB3P6-201ENST00000444896 CDK12Q9NYV4 1490 aaPredicted RBP4□□□□□ -1.77
HMGB3P6-201ENST00000444896 A0A087WV48 116 aa4□□□□□ -1.77
HMGB3P6-201ENST00000444896 TRAV24A0A0B4J272 114 aa4□□□□□ -1.77
HMGB3P6-201ENST00000444896 NR5A2O00482 541 aa4□□□□□ -1.77
HMGB3P6-201ENST00000444896 ZNF500O60304 480 aaPredicted RBP4□□□□□ -1.77
HMGB3P6-201ENST00000444896 GP1BBP13224 206 aa4□□□□□ -1.77
HMGB3P6-201ENST00000444896 DARSP14868 501 aaKnown RBP4□□□□□ -1.77
HMGB3P6-201ENST00000444896 ZNF26P17031 533 aaPredicted RBP4□□□□□ -1.77
HMGB3P6-201ENST00000444896 ACAT1P24752 427 aaKnown RBP4□□□□□ -1.77
HMGB3P6-201ENST00000444896 PSMA3P25788 255 aa4□□□□□ -1.77
HMGB3P6-201ENST00000444896 MAGEA11P43364 429 aa4□□□□□ -1.77
HMGB3P6-201ENST00000444896 RPL21P46778 160 aaKnown RBP4□□□□□ -1.77
HMGB3P6-201ENST00000444896 KCNJ10P78508 379 aa4□□□□□ -1.77
HMGB3P6-201ENST00000444896 KLC1Q07866 573 aa4□□□□□ -1.77
HMGB3P6-201ENST00000444896 PSMD6Q15008 389 aa4□□□□□ -1.77
HMGB3P6-201ENST00000444896 PHKG1Q16816 387 aa4□□□□□ -1.77
HMGB3P6-201ENST00000444896 PDLIM3Q53GG5 364 aaPredicted RBP4□□□□□ -1.77
HMGB3P6-201ENST00000444896 FAM133BQ5BKY9 247 aaKnown RBP4□□□□□ -1.77
HMGB3P6-201ENST00000444896 SPECC1Q5M775 1068 aa4□□□□□ -1.77
HMGB3P6-201ENST00000444896 ARHGEF16Q5VV41 709 aa4□□□□□ -1.77
HMGB3P6-201ENST00000444896 ZNF790Q6PG37 636 aa4□□□□□ -1.77
HMGB3P6-201ENST00000444896 DCLRE1AQ6PJP8 1040 aa4□□□□□ -1.77
HMGB3P6-201ENST00000444896 FAM47EQ6ZV65 393 aa4□□□□□ -1.77
HMGB3P6-201ENST00000444896 CTCFLQ8NI51 663 aaPredicted RBP4□□□□□ -1.77
HMGB3P6-201ENST00000444896 NSMAFQ92636 917 aa4□□□□□ -1.77
HMGB3P6-201ENST00000444896 FRAT1Q92837 279 aaPredicted RBP4□□□□□ -1.77
HMGB3P6-201ENST00000444896 LRR1Q96L50 414 aa4□□□□□ -1.77
HMGB3P6-201ENST00000444896 MGME1Q9BQP7 344 aa4□□□□□ -1.77
HMGB3P6-201ENST00000444896 RBM4Q9BWF3 364 aaKnown RBP4□□□□□ -1.77
HMGB3P6-201ENST00000444896 ZMYND12Q9H0C1 365 aa4□□□□□ -1.77
HMGB3P6-201ENST00000444896 THAP2Q9H0W7 228 aa4□□□□□ -1.77
HMGB3P6-201ENST00000444896 FN3KQ9H479 309 aa4□□□□□ -1.77
HMGB3P6-201ENST00000444896 TXNDC16Q9P2K2 825 aa4□□□□□ -1.77
HMGB3P6-201ENST00000444896 TNNQ9UQP3 1299 aa4□□□□□ -1.77
HMGB3P6-201ENST00000444896 MON2Q7Z3U7 1717 aa4□□□□□ -1.77
HMGB3P6-201ENST00000444896 UBR1Q8IWV7 1749 aa4□□□□□ -1.77
HMGB3P6-201ENST00000444896 PNPLA6Q8IY17 1366 aa4□□□□□ -1.77
HMGB3P6-201ENST00000444896 AKAP12Q02952 1782 aa3.99□□□□□ -1.77
HMGB3P6-201ENST00000444896 DIP2AQ14689 1571 aa3.99□□□□□ -1.77
HMGB3P6-201ENST00000444896 CPSF1Q10570 1443 aaKnown RBP3.99□□□□□ -1.77
HMGB3P6-201ENST00000444896 IGHV4-4A0A075B6R2 117 aa3.99□□□□□ -1.77
HMGB3P6-201ENST00000444896 CCL24O00175 119 aa3.99□□□□□ -1.77
HMGB3P6-201ENST00000444896 KLF11O14901 512 aa3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms