RNA–Protein interactions for RNA: ENST00000444061.7

SMARCA4-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 4,938 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-204ENST00000444061 OR2L2Q8NH16 312 aa13.64□□□□□ -0.23
SMARCA4-204ENST00000444061 ZFRQ96KR1 1074 aaKnown RBP13.64□□□□□ -0.23
SMARCA4-204ENST00000444061 PRRG4Q9BZD6 226 aa13.64□□□□□ -0.23
SMARCA4-204ENST00000444061 RHBDL2Q9NX52 303 aa13.64□□□□□ -0.23
SMARCA4-204ENST00000444061 CFL2Q9Y281 166 aa13.64□□□□□ -0.23
SMARCA4-204ENST00000444061 ZNF860A6NHJ4 632 aa13.64□□□□□ -0.23
SMARCA4-204ENST00000444061 NDUFV2P19404 249 aa13.64□□□□□ -0.23
SMARCA4-204ENST00000444061 RPS15AP62244 130 aaKnown RBP13.64□□□□□ -0.23
SMARCA4-204ENST00000444061 ROR2Q01974 943 aaKnown RBP13.64□□□□□ -0.23
SMARCA4-204ENST00000444061 TMEM52BQ4KMG9 183 aa13.64□□□□□ -0.23
SMARCA4-204ENST00000444061 METTL27Q8N6F8 245 aaPredicted RBP13.64□□□□□ -0.23
SMARCA4-204ENST00000444061 BHLHE22Q8NFJ8 381 aaPredicted RBP13.64□□□□□ -0.23
SMARCA4-204ENST00000444061 POP5Q969H6 163 aaKnown RBP13.64□□□□□ -0.23
SMARCA4-204ENST00000444061 NACC2Q96BF6 587 aa13.64□□□□□ -0.23
SMARCA4-204ENST00000444061 ZNF382Q96SR6 550 aa13.64□□□□□ -0.23
SMARCA4-204ENST00000444061 RTKNQ9BST9 563 aa13.64□□□□□ -0.23
SMARCA4-204ENST00000444061 SLC12A9Q9BXP2 914 aa13.64□□□□□ -0.23
SMARCA4-204ENST00000444061 TREX1Q9NSU2 369 aa13.64□□□□□ -0.23
SMARCA4-204ENST00000444061 A0A1B0GVT2 93 aa13.64□□□□□ -0.23
SMARCA4-204ENST00000444061 FANCGO15287 622 aa13.64□□□□□ -0.23
SMARCA4-204ENST00000444061 HTRA2O43464 458 aaPredicted RBP13.64□□□□□ -0.23
SMARCA4-204ENST00000444061 TBX10O75333 385 aa13.64□□□□□ -0.23
SMARCA4-204ENST00000444061 REM1O75628 298 aa13.64□□□□□ -0.23
SMARCA4-204ENST00000444061 WFS1O76024 890 aa13.64□□□□□ -0.23
SMARCA4-204ENST00000444061 PGGT1BP53609 377 aa13.64□□□□□ -0.23
SMARCA4-204ENST00000444061 DNAJB13P59910 316 aa13.64□□□□□ -0.23
SMARCA4-204ENST00000444061 GPNMBQ14956 572 aa13.64□□□□□ -0.23
SMARCA4-204ENST00000444061 ZNF789Q5FWF6 425 aa13.64□□□□□ -0.23
SMARCA4-204ENST00000444061 RPS27LQ71UM5 84 aaKnown RBP13.64□□□□□ -0.23
SMARCA4-204ENST00000444061 C12orf40Q86WS4 652 aa13.64□□□□□ -0.23
SMARCA4-204ENST00000444061 ZDHHC13Q8IUH4 622 aa13.64□□□□□ -0.23
SMARCA4-204ENST00000444061 EID2Q8N6I1 236 aa13.64□□□□□ -0.23
SMARCA4-204ENST00000444061 OR6C4Q8NGE1 309 aa13.64□□□□□ -0.23
SMARCA4-204ENST00000444061 FNDC11Q9BVV2 318 aa13.64□□□□□ -0.23
SMARCA4-204ENST00000444061 MAP1BP46821 2468 aaKnown RBP13.64□□□□□ -0.23
SMARCA4-204ENST00000444061 TLR4O00206 839 aa13.64□□□□□ -0.23
SMARCA4-204ENST00000444061 ITM2AO43736 263 aa13.64□□□□□ -0.23
SMARCA4-204ENST00000444061 SLC16A8O95907 504 aa13.64□□□□□ -0.23
SMARCA4-204ENST00000444061 POU2F2P09086 479 aa13.64□□□□□ -0.23
SMARCA4-204ENST00000444061 F3P13726 295 aa13.64□□□□□ -0.23
SMARCA4-204ENST00000444061 OPRD1P41143 372 aa13.64□□□□□ -0.23
SMARCA4-204ENST00000444061 DEFA1P59665 94 aa13.64□□□□□ -0.23
SMARCA4-204ENST00000444061 DEFA3P59666 94 aa13.64□□□□□ -0.23
SMARCA4-204ENST00000444061 RPP38P78345 283 aaKnown RBP13.64□□□□□ -0.23
SMARCA4-204ENST00000444061 ACY1Q03154 408 aa13.64□□□□□ -0.23
SMARCA4-204ENST00000444061 PMEPA1Q969W9 287 aa13.64□□□□□ -0.23
SMARCA4-204ENST00000444061 JSRP1Q96MG2 331 aaPredicted RBP13.64□□□□□ -0.23
SMARCA4-204ENST00000444061 RNPEPL1Q9HAU8 725 aa13.64□□□□□ -0.23
SMARCA4-204ENST00000444061 ZNF282Q9UDV7 671 aaPredicted RBP13.64□□□□□ -0.23
SMARCA4-204ENST00000444061 UTS2RQ9UKP6 389 aa13.64□□□□□ -0.23
SMARCA4-204ENST00000444061 GRM7Q14831 915 aa13.63□□□□□ -0.23
SMARCA4-204ENST00000444061 CDKN3Q16667 212 aa13.63□□□□□ -0.23
SMARCA4-204ENST00000444061 DUS1LQ6P1R4 473 aaKnown RBP13.63□□□□□ -0.23
SMARCA4-204ENST00000444061 CASP12Q6UXS9 341 aa13.63□□□□□ -0.23
SMARCA4-204ENST00000444061 DEF8Q6ZN54 512 aa13.63□□□□□ -0.23
SMARCA4-204ENST00000444061 FRMD7Q6ZUT3 714 aa13.63□□□□□ -0.23
SMARCA4-204ENST00000444061 SLC29A4Q7RTT9 530 aa13.63□□□□□ -0.23
SMARCA4-204ENST00000444061 SLC6A18Q96N87 628 aa13.63□□□□□ -0.23
SMARCA4-204ENST00000444061 AKTIPQ9H8T0 292 aa13.63□□□□□ -0.23
SMARCA4-204ENST00000444061 PDE10AQ9Y233 779 aa13.63□□□□□ -0.23
SMARCA4-204ENST00000444061 NFS1Q9Y697 457 aa13.63□□□□□ -0.23
SMARCA4-204ENST00000444061 TMEM233B4DJY2 109 aa13.63□□□□□ -0.23
SMARCA4-204ENST00000444061 GPR39O43194 453 aa13.63□□□□□ -0.23
SMARCA4-204ENST00000444061 NARSO43776 548 aaKnown RBP13.63□□□□□ -0.23
SMARCA4-204ENST00000444061 PRLP01236 227 aa13.63□□□□□ -0.23
SMARCA4-204ENST00000444061 HEXBP07686 556 aa13.63□□□□□ -0.23
SMARCA4-204ENST00000444061 CCKBRP32239 447 aa13.63□□□□□ -0.23
SMARCA4-204ENST00000444061 MRPS22P82650 360 aaKnown RBP13.63□□□□□ -0.23
SMARCA4-204ENST00000444061 HYAL2Q12891 473 aa13.63□□□□□ -0.23
SMARCA4-204ENST00000444061 IZUMO2Q6UXV1 221 aa13.63□□□□□ -0.23
SMARCA4-204ENST00000444061 GPR141Q7Z602 305 aa13.63□□□□□ -0.23
SMARCA4-204ENST00000444061 ADCK1Q86TW2 530 aa13.63□□□□□ -0.23
SMARCA4-204ENST00000444061 KIAA1958Q8N8K9 716 aa13.63□□□□□ -0.23
SMARCA4-204ENST00000444061 ZNF248Q8NDW4 579 aa13.63□□□□□ -0.23
SMARCA4-204ENST00000444061 OR13J1Q8NGT2 312 aa13.63□□□□□ -0.23
SMARCA4-204ENST00000444061 OR6Y1Q8NGX8 325 aa13.63□□□□□ -0.23
SMARCA4-204ENST00000444061 PHF10Q8WUB8 498 aaKnown RBP13.63□□□□□ -0.23
SMARCA4-204ENST00000444061 DACH2Q96NX9 599 aa13.63□□□□□ -0.23
SMARCA4-204ENST00000444061 DDX28Q9NUL7 540 aaKnown RBP13.63□□□□□ -0.23
SMARCA4-204ENST00000444061 LYARQ9NX58 379 aaKnown RBP13.63□□□□□ -0.23
SMARCA4-204ENST00000444061 MS4A12Q9NXJ0 267 aa13.63□□□□□ -0.23
SMARCA4-204ENST00000444061 TAAR2Q9P1P5 351 aa13.63□□□□□ -0.23
SMARCA4-204ENST00000444061 HCN2Q9UL51 889 aa13.63□□□□□ -0.23
SMARCA4-204ENST00000444061 PRPF19Q9UMS4 504 aaKnown RBP13.63□□□□□ -0.23
SMARCA4-204ENST00000444061 YKT6O15498 198 aa13.63□□□□□ -0.23
SMARCA4-204ENST00000444061 NUAK1O60285 661 aa13.63□□□□□ -0.23
SMARCA4-204ENST00000444061 NR2F6P10588 404 aa13.63□□□□□ -0.23
SMARCA4-204ENST00000444061 ADPRHP54922 357 aa13.63□□□□□ -0.23
SMARCA4-204ENST00000444061 PCLAFQ15004 111 aa13.63□□□□□ -0.23
SMARCA4-204ENST00000444061 TMEM196Q5HYL7 178 aa13.63□□□□□ -0.23
SMARCA4-204ENST00000444061 TMEM156Q8N614 296 aa13.63□□□□□ -0.23
SMARCA4-204ENST00000444061 CD200R1Q8TD46 325 aa13.63□□□□□ -0.23
SMARCA4-204ENST00000444061 ZNF483Q8TF39 744 aaPredicted RBP13.63□□□□□ -0.23
SMARCA4-204ENST00000444061 ARHGAP9Q9BRR9 750 aa13.63□□□□□ -0.23
SMARCA4-204ENST00000444061 GAREM1Q9H706 876 aa13.63□□□□□ -0.23
SMARCA4-204ENST00000444061 DUXAA6NLW8 204 aa13.63□□□□□ -0.23
SMARCA4-204ENST00000444061 M0R3G1 203 aa13.63□□□□□ -0.23
SMARCA4-204ENST00000444061 CAPN5O15484 640 aaPredicted RBP13.63□□□□□ -0.23
SMARCA4-204ENST00000444061 OLFM2O95897 454 aa13.63□□□□□ -0.23
SMARCA4-204ENST00000444061 DEFB134Q4QY38 66 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms