RNA–Protein interactions for RNA: ENST00000439775.1

SNRPD3-204, Transcript of small nuclear ribonucleoprotein D3 polypeptide, humanhuman

TSL 3

Gene SNRPD3, Length 640 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPD3-204ENST00000439775 LRRC39Q96DD0 335 aa15.46■□□□□ 0.07
SNRPD3-204ENST00000439775 THAP11Q96EK4 314 aa15.46■□□□□ 0.07
SNRPD3-204ENST00000439775 MMABQ96EY8 250 aaPredicted RBP15.46■□□□□ 0.07
SNRPD3-204ENST00000439775 THOC3Q96J01 351 aaKnown RBP15.46■□□□□ 0.07
SNRPD3-204ENST00000439775 RUNDC3BQ96NL0 473 aa15.46■□□□□ 0.07
SNRPD3-204ENST00000439775 PRAP1Q96NZ9 151 aa15.46■□□□□ 0.07
SNRPD3-204ENST00000439775 MESP1Q9BRJ9 268 aa15.46■□□□□ 0.07
SNRPD3-204ENST00000439775 EPS8L2Q9H6S3 715 aa15.46■□□□□ 0.07
SNRPD3-204ENST00000439775 PLAC1Q9HBJ0 212 aa15.46■□□□□ 0.07
SNRPD3-204ENST00000439775 ZNF160Q9HCG1 818 aa15.46■□□□□ 0.07
SNRPD3-204ENST00000439775 LRRC4CQ9HCJ2 640 aa15.46■□□□□ 0.07
SNRPD3-204ENST00000439775 CORO1CQ9ULV4 474 aaPredicted RBP15.46■□□□□ 0.07
SNRPD3-204ENST00000439775 NOVA2Q9UNW9 492 aaKnown RBP15.46■□□□□ 0.07
SNRPD3-204ENST00000439775 CSAG2Q9Y5P2 127 aa15.46■□□□□ 0.07
SNRPD3-204ENST00000439775 A0A0A6YYC8 382 aaPredicted RBP15.45■□□□□ 0.06
SNRPD3-204ENST00000439775 NSG1A0A0A6YYJ2 146 aa15.45■□□□□ 0.06
SNRPD3-204ENST00000439775 I3L1I5 382 aaPredicted RBP15.45■□□□□ 0.06
SNRPD3-204ENST00000439775 EMP2P54851 167 aa15.45■□□□□ 0.06
SNRPD3-204ENST00000439775 NR6A1Q15406 480 aa15.45■□□□□ 0.06
SNRPD3-204ENST00000439775 HIF1AQ16665 826 aa15.45■□□□□ 0.06
SNRPD3-204ENST00000439775 BBS9Q3SYG4 887 aa15.45■□□□□ 0.06
SNRPD3-204ENST00000439775 B3GNTL1Q67FW5 361 aaPredicted RBP15.45■□□□□ 0.06
SNRPD3-204ENST00000439775 PAQR3Q6TCH7 311 aa15.45■□□□□ 0.06
SNRPD3-204ENST00000439775 ISLR2Q6UXK2 745 aa15.45■□□□□ 0.06
SNRPD3-204ENST00000439775 NDUFAF7Q7L592 441 aa15.45■□□□□ 0.06
SNRPD3-204ENST00000439775 VN1R4Q7Z5H5 301 aa15.45■□□□□ 0.06
SNRPD3-204ENST00000439775 PLD3Q8IV08 490 aa15.45■□□□□ 0.06
SNRPD3-204ENST00000439775 IGDCC3Q8IVU1 814 aa15.45■□□□□ 0.06
SNRPD3-204ENST00000439775 KBTBD2Q8IY47 623 aa15.45■□□□□ 0.06
SNRPD3-204ENST00000439775 SSC4DQ8WTU2 575 aa15.45■□□□□ 0.06
SNRPD3-204ENST00000439775 C8orf44Q96CB5 159 aa15.45■□□□□ 0.06
SNRPD3-204ENST00000439775 LINGO1Q96FE5 620 aa15.45■□□□□ 0.06
SNRPD3-204ENST00000439775 FAM129AQ9BZQ8 928 aa15.45■□□□□ 0.06
SNRPD3-204ENST00000439775 COPG1Q9Y678 874 aaKnown RBP15.45■□□□□ 0.06
SNRPD3-204ENST00000439775 SPTAN1Q13813 2472 aaKnown RBP15.44■□□□□ 0.06
SNRPD3-204ENST00000439775 HEATR5BQ9P2D3 2071 aa15.44■□□□□ 0.06
SNRPD3-204ENST00000439775 LOC102723996A0A087X1L8 192 aa15.44■□□□□ 0.06
SNRPD3-204ENST00000439775 IGHV1-45A0A0A0MS14 117 aa15.44■□□□□ 0.06
SNRPD3-204ENST00000439775 H0YIG0 161 aa15.44■□□□□ 0.06
SNRPD3-204ENST00000439775 SEMA7AO75326 666 aa15.44■□□□□ 0.06
SNRPD3-204ENST00000439775 CBX6O95503 412 aa15.44■□□□□ 0.06
SNRPD3-204ENST00000439775 TSPAN12O95859 305 aa15.44■□□□□ 0.06
SNRPD3-204ENST00000439775 HEXBP07686 556 aa15.44■□□□□ 0.06
SNRPD3-204ENST00000439775 CYC1P08574 325 aa15.44■□□□□ 0.06
SNRPD3-204ENST00000439775 CXCR2P25025 360 aa15.44■□□□□ 0.06
SNRPD3-204ENST00000439775 TSFMP43897 325 aaKnown RBP15.44■□□□□ 0.06
SNRPD3-204ENST00000439775 AVPR1BP47901 424 aa15.44■□□□□ 0.06
SNRPD3-204ENST00000439775 CSNK1G2P78368 415 aa15.44■□□□□ 0.06
SNRPD3-204ENST00000439775 MFAP5Q13361 173 aa15.44■□□□□ 0.06
SNRPD3-204ENST00000439775 FRG1Q14331 258 aaKnown RBP15.44■□□□□ 0.06
SNRPD3-204ENST00000439775 TEDDM1Q5T9Z0 273 aa15.44■□□□□ 0.06
SNRPD3-204ENST00000439775 STEAP4Q687X5 459 aa15.44■□□□□ 0.06
SNRPD3-204ENST00000439775 AGTRAPQ6RW13 159 aa15.44■□□□□ 0.06
SNRPD3-204ENST00000439775 MBOAT1Q6ZNC8 495 aa15.44■□□□□ 0.06
SNRPD3-204ENST00000439775 CREG2Q8IUH2 290 aa15.44■□□□□ 0.06
SNRPD3-204ENST00000439775 ZC3H7AQ8IWR0 971 aaKnown RBP15.44■□□□□ 0.06
SNRPD3-204ENST00000439775 LMF1Q96S06 567 aa15.44■□□□□ 0.06
SNRPD3-204ENST00000439775 WDR83Q9BRX9 315 aaKnown RBP15.44■□□□□ 0.06
SNRPD3-204ENST00000439775 YIPF2Q9BWQ6 316 aa15.44■□□□□ 0.06
SNRPD3-204ENST00000439775 SGPP1Q9BX95 441 aa15.44■□□□□ 0.06
SNRPD3-204ENST00000439775 RIC8BQ9NVN3 520 aa15.44■□□□□ 0.06
SNRPD3-204ENST00000439775 NTNG1Q9Y2I2 539 aa15.44■□□□□ 0.06
SNRPD3-204ENST00000439775 NAV2Q8IVL1 2488 aa15.43■□□□□ 0.06
SNRPD3-204ENST00000439775 USP27XA6NNY8 438 aa15.43■□□□□ 0.06
SNRPD3-204ENST00000439775 FFAR3O14843 346 aa15.43■□□□□ 0.06
SNRPD3-204ENST00000439775 GPR42O15529 346 aa15.43■□□□□ 0.06
SNRPD3-204ENST00000439775 NSA2O95478 260 aaKnown RBP15.43■□□□□ 0.06
SNRPD3-204ENST00000439775 HIST1H2AGP0C0S8 130 aaPredicted RBP15.43■□□□□ 0.06
SNRPD3-204ENST00000439775 PRR35P0CG20 571 aa15.43■□□□□ 0.06
SNRPD3-204ENST00000439775 HIST1H2ADP20671 130 aa15.43■□□□□ 0.06
SNRPD3-204ENST00000439775 ELK3P41970 407 aa15.43■□□□□ 0.06
SNRPD3-204ENST00000439775 GLRBP48167 497 aa15.43■□□□□ 0.06
SNRPD3-204ENST00000439775 AP1S2P56377 157 aa15.43■□□□□ 0.06
SNRPD3-204ENST00000439775 IL2P60568 153 aa15.43■□□□□ 0.06
SNRPD3-204ENST00000439775 DR1Q01658 176 aa15.43■□□□□ 0.06
SNRPD3-204ENST00000439775 PDAP1Q13442 181 aaKnown RBP15.43■□□□□ 0.06
SNRPD3-204ENST00000439775 ZNF169Q14929 603 aaPredicted RBP15.43■□□□□ 0.06
SNRPD3-204ENST00000439775 TLR1Q15399 786 aa15.43■□□□□ 0.06
SNRPD3-204ENST00000439775 PHKG1Q16816 387 aa15.43■□□□□ 0.06
SNRPD3-204ENST00000439775 SYT16Q17RD7 645 aa15.43■□□□□ 0.06
SNRPD3-204ENST00000439775 EIF2S3LQ2VIR3 472 aaKnown RBP15.43■□□□□ 0.06
SNRPD3-204ENST00000439775 TMEM214Q6NUQ4 689 aaKnown RBP15.43■□□□□ 0.06
SNRPD3-204ENST00000439775 HIBCHQ6NVY1 386 aaPredicted RBP15.43■□□□□ 0.06
SNRPD3-204ENST00000439775 TMEM205Q6UW68 189 aa15.43■□□□□ 0.06
SNRPD3-204ENST00000439775 LCTLQ6UWM7 567 aa15.43■□□□□ 0.06
SNRPD3-204ENST00000439775 RIPOR1Q6ZS17 1223 aa15.43■□□□□ 0.06
SNRPD3-204ENST00000439775 C17orf64Q86WR6 236 aa15.43■□□□□ 0.06
SNRPD3-204ENST00000439775 DNAJB14Q8TBM8 379 aa15.43■□□□□ 0.06
SNRPD3-204ENST00000439775 CFAP36Q96G28 342 aa15.43■□□□□ 0.06
SNRPD3-204ENST00000439775 HIST1H2AHQ96KK5 128 aa15.43■□□□□ 0.06
SNRPD3-204ENST00000439775 CAPZA3Q96KX2 299 aa15.43■□□□□ 0.06
SNRPD3-204ENST00000439775 HIST1H2AJQ99878 128 aa15.43■□□□□ 0.06
SNRPD3-204ENST00000439775 HAUS8Q9BT25 410 aa15.43■□□□□ 0.06
SNRPD3-204ENST00000439775 H2AFJQ9BTM1 129 aa15.43■□□□□ 0.06
SNRPD3-204ENST00000439775 PPANQ9NQ55 473 aaKnown RBP15.43■□□□□ 0.06
SNRPD3-204ENST00000439775 AGPAT4Q9NRZ5 378 aa15.43■□□□□ 0.06
SNRPD3-204ENST00000439775 SLC17A6Q9P2U8 582 aa15.43■□□□□ 0.06
SNRPD3-204ENST00000439775 CHMP2BQ9UQN3 213 aa15.43■□□□□ 0.06
SNRPD3-204ENST00000439775 SH2B3Q9UQQ2 575 aa15.43■□□□□ 0.06
SNRPD3-204ENST00000439775 MRPS2Q9Y399 296 aaKnown RBP15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms