RNA–Protein interactions for RNA: ENST00000438629.2

LSM1P1-201, Transcript of LSM1 homolog, mRNA degradation associated pseudogene 1, humanhuman

BASIC

Gene LSM1P1, Length 273 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1P1-201ENST00000438629 TRIM65Q6PJ69 517 aa3.34□□□□□ -1.87
LSM1P1-201ENST00000438629 DCLRE1AQ6PJP8 1040 aa3.34□□□□□ -1.87
LSM1P1-201ENST00000438629 TMEM207Q6UWW9 146 aa3.34□□□□□ -1.87
LSM1P1-201ENST00000438629 GSG1LQ6UXU4 331 aa3.34□□□□□ -1.87
LSM1P1-201ENST00000438629 RAPH1Q70E73 1250 aa3.34□□□□□ -1.87
LSM1P1-201ENST00000438629 HOGA1Q86XE5 327 aa3.34□□□□□ -1.87
LSM1P1-201ENST00000438629 RCOR2Q8IZ40 523 aa3.34□□□□□ -1.87
LSM1P1-201ENST00000438629 TEX9Q8N6V9 391 aa3.34□□□□□ -1.87
LSM1P1-201ENST00000438629 SLC37A3Q8NCC5 494 aa3.34□□□□□ -1.87
LSM1P1-201ENST00000438629 OR1L3Q8NH93 324 aa3.34□□□□□ -1.87
LSM1P1-201ENST00000438629 C10orf90Q96M02 699 aa3.34□□□□□ -1.87
LSM1P1-201ENST00000438629 SHARPINQ9H0F6 387 aa3.34□□□□□ -1.87
LSM1P1-201ENST00000438629 ATP13A3Q9H7F0 1226 aa3.34□□□□□ -1.87
LSM1P1-201ENST00000438629 RNF121Q9H920 327 aa3.34□□□□□ -1.87
LSM1P1-201ENST00000438629 ZDHHC18Q9NUE0 388 aa3.34□□□□□ -1.87
LSM1P1-201ENST00000438629 ERAP1Q9NZ08 941 aa3.34□□□□□ -1.87
LSM1P1-201ENST00000438629 RAI14Q9P0K7 980 aa3.34□□□□□ -1.87
LSM1P1-201ENST00000438629 EPS15L1Q9UBC2 864 aa3.34□□□□□ -1.87
LSM1P1-201ENST00000438629 WDR37Q9Y2I8 494 aa3.34□□□□□ -1.87
LSM1P1-201ENST00000438629 KNSTRNQ9Y448 316 aa3.34□□□□□ -1.87
LSM1P1-201ENST00000438629 CPLX1O14810 134 aa3.33□□□□□ -1.88
LSM1P1-201ENST00000438629 DDHD2O94830 711 aa3.33□□□□□ -1.88
LSM1P1-201ENST00000438629 STAG3L1P0CL83 205 aa3.33□□□□□ -1.88
LSM1P1-201ENST00000438629 KIF5BP33176 963 aa3.33□□□□□ -1.88
LSM1P1-201ENST00000438629 CRKLP46109 303 aaKnown RBP3.33□□□□□ -1.88
LSM1P1-201ENST00000438629 DNA2P51530 1060 aa3.33□□□□□ -1.88
LSM1P1-201ENST00000438629 SP3Q02447 781 aa3.33□□□□□ -1.88
LSM1P1-201ENST00000438629 HNRNPDQ14103 355 aaKnown RBP3.33□□□□□ -1.88
LSM1P1-201ENST00000438629 TRIM29Q14134 588 aa3.33□□□□□ -1.88
LSM1P1-201ENST00000438629 ZFP69Q49AA0 526 aa3.33□□□□□ -1.88
LSM1P1-201ENST00000438629 SLC25A53Q5H9E4 307 aa3.33□□□□□ -1.88
LSM1P1-201ENST00000438629 FGD3Q5JSP0 725 aa3.33□□□□□ -1.88
LSM1P1-201ENST00000438629 CAVIN1Q6NZI2 390 aaKnown RBP3.33□□□□□ -1.88
LSM1P1-201ENST00000438629 SLC25A47Q6Q0C1 308 aa3.33□□□□□ -1.88
LSM1P1-201ENST00000438629 FIP1L1Q6UN15 594 aaKnown RBP3.33□□□□□ -1.88
LSM1P1-201ENST00000438629 IL17RELQ6ZVW7 336 aa3.33□□□□□ -1.88
LSM1P1-201ENST00000438629 FCRLAQ7L513 359 aa3.33□□□□□ -1.88
LSM1P1-201ENST00000438629 LACC1Q8IV20 430 aa3.33□□□□□ -1.88
LSM1P1-201ENST00000438629 FAM219AQ8IW50 185 aa3.33□□□□□ -1.88
LSM1P1-201ENST00000438629 SIX6OS1Q8N1H7 587 aa3.33□□□□□ -1.88
LSM1P1-201ENST00000438629 ARL6IP6Q8N6S5 226 aa3.33□□□□□ -1.88
LSM1P1-201ENST00000438629 CCDC63Q8NA47 563 aa3.33□□□□□ -1.88
LSM1P1-201ENST00000438629 OR8H1Q8NGG4 311 aa3.33□□□□□ -1.88
LSM1P1-201ENST00000438629 OCC1Q8TAD7 63 aa3.33□□□□□ -1.88
LSM1P1-201ENST00000438629 MAPK15Q8TD08 544 aa3.33□□□□□ -1.88
LSM1P1-201ENST00000438629 HEXDCQ8WVB3 486 aa3.33□□□□□ -1.88
LSM1P1-201ENST00000438629 ZNRF4Q8WWF5 429 aa3.33□□□□□ -1.88
LSM1P1-201ENST00000438629 PIK3R3Q92569 461 aa3.33□□□□□ -1.88
LSM1P1-201ENST00000438629 P2RX5Q93086 422 aa3.33□□□□□ -1.88
LSM1P1-201ENST00000438629 GDAP1L1Q96MZ0 367 aa3.33□□□□□ -1.88
LSM1P1-201ENST00000438629 JAKMIP1Q96N16 626 aaKnown RBP3.33□□□□□ -1.88
LSM1P1-201ENST00000438629 BTBD9Q96Q07 612 aa3.33□□□□□ -1.88
LSM1P1-201ENST00000438629 KRT12Q99456 494 aa3.33□□□□□ -1.88
LSM1P1-201ENST00000438629 TSPY26PQ9H489 355 aa3.33□□□□□ -1.88
LSM1P1-201ENST00000438629 SCRT2Q9NQ03 307 aa3.33□□□□□ -1.88
LSM1P1-201ENST00000438629 RNF186Q9NXI6 227 aa3.33□□□□□ -1.88
LSM1P1-201ENST00000438629 MDFICQ9P1T7 246 aa3.33□□□□□ -1.88
LSM1P1-201ENST00000438629 VPS18Q9P253 973 aa3.33□□□□□ -1.88
LSM1P1-201ENST00000438629 EPHA6Q9UF33 1036 aa3.33□□□□□ -1.88
LSM1P1-201ENST00000438629 IL36AQ9UHA7 158 aa3.33□□□□□ -1.88
LSM1P1-201ENST00000438629 PRDM4Q9UKN5 801 aa3.33□□□□□ -1.88
LSM1P1-201ENST00000438629 ELF5Q9UKW6 265 aaPredicted RBP3.33□□□□□ -1.88
LSM1P1-201ENST00000438629 TMCC3Q9ULS5 477 aa3.33□□□□□ -1.88
LSM1P1-201ENST00000438629 SMC3Q9UQE7 1217 aa3.33□□□□□ -1.88
LSM1P1-201ENST00000438629 MRPS28Q9Y2Q9 187 aaKnown RBP3.33□□□□□ -1.88
LSM1P1-201ENST00000438629 POMT1Q9Y6A1 747 aa3.33□□□□□ -1.88
LSM1P1-201ENST00000438629 GPRASP1Q5JY77 1395 aa3.33□□□□□ -1.88
LSM1P1-201ENST00000438629 TRBV5-5A0A0J9YX44 114 aa3.32□□□□□ -1.88
LSM1P1-201ENST00000438629 TEX28O15482 410 aa3.32□□□□□ -1.88
LSM1P1-201ENST00000438629 SEC24AO95486 1093 aa3.32□□□□□ -1.88
LSM1P1-201ENST00000438629 SERPING1P05155 500 aa3.32□□□□□ -1.88
LSM1P1-201ENST00000438629 ZFYP08048 801 aaPredicted RBP3.32□□□□□ -1.88
LSM1P1-201ENST00000438629 FAM58BPP0C7Q3 252 aa3.32□□□□□ -1.88
LSM1P1-201ENST00000438629 TCF4P15884 667 aa3.32□□□□□ -1.88
LSM1P1-201ENST00000438629 ELAVL4P26378 380 aaKnown RBP3.32□□□□□ -1.88
LSM1P1-201ENST00000438629 ANP32AP39687 249 aaKnown RBP3.32□□□□□ -1.88
LSM1P1-201ENST00000438629 TNNT2P45379 298 aaPredicted RBP3.32□□□□□ -1.88
LSM1P1-201ENST00000438629 PAX9P55771 341 aa3.32□□□□□ -1.88
LSM1P1-201ENST00000438629 UBXN1Q04323 297 aa3.32□□□□□ -1.88
LSM1P1-201ENST00000438629 PPP2R5CQ13362 524 aa3.32□□□□□ -1.88
LSM1P1-201ENST00000438629 PTPN14Q15678 1187 aa3.32□□□□□ -1.88
LSM1P1-201ENST00000438629 ZNF74Q16587 644 aa3.32□□□□□ -1.88
LSM1P1-201ENST00000438629 MRGPRG-AS1Q2M3A8 158 aa3.32□□□□□ -1.88
LSM1P1-201ENST00000438629 HLA-BQ31612 363 aa3.32□□□□□ -1.88
LSM1P1-201ENST00000438629 SLC10A5Q5PT55 438 aa3.32□□□□□ -1.88
LSM1P1-201ENST00000438629 ADAMTSL4-AS1Q5T5F5 129 aa3.32□□□□□ -1.88
LSM1P1-201ENST00000438629 PWWP2BQ6NUJ5 590 aa3.32□□□□□ -1.88
LSM1P1-201ENST00000438629 NOTCH2NLQ7Z3S9 236 aa3.32□□□□□ -1.88
LSM1P1-201ENST00000438629 GLRX5Q86SX6 157 aa3.32□□□□□ -1.88
LSM1P1-201ENST00000438629 CCDC60Q8IWA6 550 aaPredicted RBP3.32□□□□□ -1.88
LSM1P1-201ENST00000438629 OR8H3Q8N146 312 aa3.32□□□□□ -1.88
LSM1P1-201ENST00000438629 PRSS35Q8N3Z0 413 aa3.32□□□□□ -1.88
LSM1P1-201ENST00000438629 ZNF843Q8N446 348 aa3.32□□□□□ -1.88
LSM1P1-201ENST00000438629 OR5T2Q8NGG2 359 aa3.32□□□□□ -1.88
LSM1P1-201ENST00000438629 APOBEC4Q8WW27 367 aaKnown RBP3.32□□□□□ -1.88
LSM1P1-201ENST00000438629 PYCR2Q96C36 320 aa3.32□□□□□ -1.88
LSM1P1-201ENST00000438629 PRAC1Q96KF2 57 aa3.32□□□□□ -1.88
LSM1P1-201ENST00000438629 CCDC114Q96M63 670 aa3.32□□□□□ -1.88
LSM1P1-201ENST00000438629 CCDC3Q9BQI4 270 aa3.32□□□□□ -1.88
LSM1P1-201ENST00000438629 SYT15Q9BQS2 421 aa3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms