RNA–Protein interactions for RNA: ENST00000437600.8

CUX1-206, Transcript of cut like homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene CUX1, Length 3,031 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-206ENST00000437600 TPD52L3Q96J77 140 aa9.16□□□□□ -0.94
CUX1-206ENST00000437600 NPLQ9BXD5 320 aaPredicted RBP9.16□□□□□ -0.94
CUX1-206ENST00000437600 DGCR6LQ9BY27 220 aa9.16□□□□□ -0.94
CUX1-206ENST00000437600 CEP44Q9C0F1 390 aa9.16□□□□□ -0.94
CUX1-206ENST00000437600 NDUFA13Q9P0J0 144 aa9.16□□□□□ -0.94
CUX1-206ENST00000437600 PNMA8BQ9ULN7 279 aaPredicted RBP9.16□□□□□ -0.94
CUX1-206ENST00000437600 PAIP2BQ9ULR5 123 aaKnown RBP9.16□□□□□ -0.94
CUX1-206ENST00000437600 PLAGL1Q9UM63 463 aa9.16□□□□□ -0.94
CUX1-206ENST00000437600 ABCG2Q9UNQ0 655 aa9.16□□□□□ -0.94
CUX1-206ENST00000437600 SH2B3Q9UQQ2 575 aa9.16□□□□□ -0.94
CUX1-206ENST00000437600 SCN8AQ9UQD0 1980 aa9.16□□□□□ -0.94
CUX1-206ENST00000437600 BOLA2-SMG1P6H3BVE0 249 aa9.15□□□□□ -0.94
CUX1-206ENST00000437600 EIF3FO00303 357 aaPredicted RBP9.15□□□□□ -0.94
CUX1-206ENST00000437600 MMP20O60882 483 aa9.15□□□□□ -0.94
CUX1-206ENST00000437600 TGFB1P01137 390 aa9.15□□□□□ -0.94
CUX1-206ENST00000437600 FTH1P02794 183 aa9.15□□□□□ -0.94
CUX1-206ENST00000437600 ENGP17813 658 aa9.15□□□□□ -0.94
CUX1-206ENST00000437600 DGKEP52429 567 aa9.15□□□□□ -0.94
CUX1-206ENST00000437600 TMEM115Q12893 351 aaPredicted RBP9.15□□□□□ -0.94
CUX1-206ENST00000437600 KCNAB2Q13303 367 aa9.15□□□□□ -0.94
CUX1-206ENST00000437600 ZNF234Q14588 700 aa9.15□□□□□ -0.94
CUX1-206ENST00000437600 GAB4Q2WGN9 574 aa9.15□□□□□ -0.94
CUX1-206ENST00000437600 ZNF805Q5CZA5 627 aa9.15□□□□□ -0.94
CUX1-206ENST00000437600 BRAT1Q6PJG6 821 aa9.15□□□□□ -0.94
CUX1-206ENST00000437600 VITQ6UXI7 678 aa9.15□□□□□ -0.94
CUX1-206ENST00000437600 R3HCC1LQ7Z5L2 792 aaKnown RBP9.15□□□□□ -0.94
CUX1-206ENST00000437600 PATL1Q86TB9 770 aaKnown RBP9.15□□□□□ -0.94
CUX1-206ENST00000437600 CBARPQ8N350 705 aaPredicted RBP9.15□□□□□ -0.94
CUX1-206ENST00000437600 ZBTB8BQ8NAP8 495 aaPredicted RBP9.15□□□□□ -0.94
CUX1-206ENST00000437600 LEMD2Q8NC56 503 aa9.15□□□□□ -0.94
CUX1-206ENST00000437600 CNIH3Q8TBE1 160 aa9.15□□□□□ -0.94
CUX1-206ENST00000437600 AP2M1Q96CW1 435 aa9.15□□□□□ -0.94
CUX1-206ENST00000437600 IL17FQ96PD4 163 aa9.15□□□□□ -0.94
CUX1-206ENST00000437600 ZNF451Q9Y4E5 1061 aa9.15□□□□□ -0.94
CUX1-206ENST00000437600 PCYT1BQ9Y5K3 369 aaPredicted RBP9.15□□□□□ -0.94
CUX1-206ENST00000437600 H0YJX3 145 aa9.15□□□□□ -0.94
CUX1-206ENST00000437600 OPN1SWP03999 348 aa9.15□□□□□ -0.94
CUX1-206ENST00000437600 EPHX1P07099 455 aa9.15□□□□□ -0.94
CUX1-206ENST00000437600 ZNF182P17025 639 aaPredicted RBP9.15□□□□□ -0.94
CUX1-206ENST00000437600 FCARP24071 287 aa9.15□□□□□ -0.94
CUX1-206ENST00000437600 MAP4P27816 1152 aaKnown RBP9.15□□□□□ -0.94
CUX1-206ENST00000437600 VIPR1P32241 457 aa9.15□□□□□ -0.94
CUX1-206ENST00000437600 ALDH3B2P48448 385 aa9.15□□□□□ -0.94
CUX1-206ENST00000437600 ADARB1P78563 741 aaKnown RBP9.15□□□□□ -0.94
CUX1-206ENST00000437600 DCTN2Q13561 401 aaKnown RBP9.15□□□□□ -0.94
CUX1-206ENST00000437600 ANKDD1AQ495B1 522 aa9.15□□□□□ -0.94
CUX1-206ENST00000437600 ATAT1Q5SQI0 421 aa9.15□□□□□ -0.94
CUX1-206ENST00000437600 CRTC3Q6UUV7 619 aa9.15□□□□□ -0.94
CUX1-206ENST00000437600 CEP68Q76N32 757 aa9.15□□□□□ -0.94
CUX1-206ENST00000437600 THOC6Q86W42 341 aaKnown RBP9.15□□□□□ -0.94
CUX1-206ENST00000437600 ETFBKMTQ8IXQ9 262 aa9.15□□□□□ -0.94
CUX1-206ENST00000437600 RAVER1Q8IY67 606 aaKnown RBP9.15□□□□□ -0.94
CUX1-206ENST00000437600 SYTL1Q8IYJ3 562 aa9.15□□□□□ -0.94
CUX1-206ENST00000437600 ISOC1Q96CN7 298 aa9.15□□□□□ -0.94
CUX1-206ENST00000437600 SORBS1Q9BX66 1292 aaKnown RBP9.15□□□□□ -0.94
CUX1-206ENST00000437600 S1PR5Q9H228 398 aa9.15□□□□□ -0.94
CUX1-206ENST00000437600 FANCEQ9HB96 536 aa9.15□□□□□ -0.94
CUX1-206ENST00000437600 AASDHPPTQ9NRN7 309 aa9.15□□□□□ -0.94
CUX1-206ENST00000437600 THG1LQ9NWX6 298 aaKnown RBP9.15□□□□□ -0.94
CUX1-206ENST00000437600 GULP1Q9UBP9 304 aa9.15□□□□□ -0.94
CUX1-206ENST00000437600 SH3GLB1Q9Y371 365 aa9.15□□□□□ -0.94
CUX1-206ENST00000437600 TRPM6Q9BX84 2022 aa9.15□□□□□ -0.95
CUX1-206ENST00000437600 A0A087WXM4 84 aa9.15□□□□□ -0.95
CUX1-206ENST00000437600 GNG14A0A1W2PPG7 69 aa9.15□□□□□ -0.95
CUX1-206ENST00000437600 CLIC1O00299 241 aa9.15□□□□□ -0.95
CUX1-206ENST00000437600 THRBP10828 461 aa9.15□□□□□ -0.95
CUX1-206ENST00000437600 UMPSP11172 480 aa9.15□□□□□ -0.95
CUX1-206ENST00000437600 COX7A2P14406 83 aa9.15□□□□□ -0.95
CUX1-206ENST00000437600 AMD1P17707 334 aa9.15□□□□□ -0.95
CUX1-206ENST00000437600 IL12RB1P42701 662 aa9.15□□□□□ -0.95
CUX1-206ENST00000437600 RGS19P49795 217 aa9.15□□□□□ -0.95
CUX1-206ENST00000437600 ENTPD1P49961 510 aa9.15□□□□□ -0.95
CUX1-206ENST00000437600 LSM3P62310 102 aaKnown RBP9.15□□□□□ -0.95
CUX1-206ENST00000437600 SMN1Q16637 294 aaKnown RBP9.15□□□□□ -0.95
CUX1-206ENST00000437600 UGT8Q16880 541 aa9.15□□□□□ -0.95
CUX1-206ENST00000437600 CTU2Q2VPK5 515 aaKnown RBP9.15□□□□□ -0.95
CUX1-206ENST00000437600 LRIT3Q3SXY7 679 aa9.15□□□□□ -0.95
CUX1-206ENST00000437600 SYTL3Q4VX76 610 aa9.15□□□□□ -0.95
CUX1-206ENST00000437600 LDLRAP1Q5SW96 308 aa9.15□□□□□ -0.95
CUX1-206ENST00000437600 AGTRAPQ6RW13 159 aa9.15□□□□□ -0.95
CUX1-206ENST00000437600 LIPIQ6XZB0 460 aa9.15□□□□□ -0.95
CUX1-206ENST00000437600 Q6ZPB1 254 aaPredicted RBP9.15□□□□□ -0.95
CUX1-206ENST00000437600 TRAPPC5Q8IUR0 188 aa9.15□□□□□ -0.95
CUX1-206ENST00000437600 MICU2Q8IYU8 434 aa9.15□□□□□ -0.95
CUX1-206ENST00000437600 MMP21Q8N119 569 aa9.15□□□□□ -0.95
CUX1-206ENST00000437600 C1orf52Q8N6N3 182 aaKnown RBP9.15□□□□□ -0.95
CUX1-206ENST00000437600 PAPD5Q8NDF8 572 aaKnown RBP9.15□□□□□ -0.95
CUX1-206ENST00000437600 ASZ1Q8WWH4 475 aa9.15□□□□□ -0.95
CUX1-206ENST00000437600 GAB3Q8WWW8 586 aa9.15□□□□□ -0.95
CUX1-206ENST00000437600 ARRDC3Q96B67 414 aa9.15□□□□□ -0.95
CUX1-206ENST00000437600 TMEM159Q96B96 161 aa9.15□□□□□ -0.95
CUX1-206ENST00000437600 OTUB2Q96DC9 234 aa9.15□□□□□ -0.95
CUX1-206ENST00000437600 OR2AG1Q9H205 316 aa9.15□□□□□ -0.95
CUX1-206ENST00000437600 ARMC7Q9H6L4 198 aa9.15□□□□□ -0.95
CUX1-206ENST00000437600 SGK2Q9HBY8 427 aa9.15□□□□□ -0.95
CUX1-206ENST00000437600 TRPV5Q9NQA5 729 aa9.15□□□□□ -0.95
CUX1-206ENST00000437600 DNAJC11Q9NVH1 559 aa9.15□□□□□ -0.95
CUX1-206ENST00000437600 MARK1Q9P0L2 795 aa9.15□□□□□ -0.95
CUX1-206ENST00000437600 RAPGEFL1Q9UHV5 662 aa9.15□□□□□ -0.95
CUX1-206ENST00000437600 SNX6Q9UNH7 406 aa9.15□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms