RNA–Protein interactions for RNA: ENST00000431540.7

CDH13-203, Transcript of cadherin 13, humanhuman

TSL 1 (best) BASIC

Gene CDH13, Length 831 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-203ENST00000431540 VASH1Q7L8A9 365 aaPredicted RBP7.86□□□□□ -1.15
CDH13-203ENST00000431540 LMNTD2Q8IXW0 634 aa7.86□□□□□ -1.15
CDH13-203ENST00000431540 ARHGEF39Q8N4T4 335 aa7.86□□□□□ -1.15
CDH13-203ENST00000431540 TMEM178AQ8NBL3 297 aa7.86□□□□□ -1.15
CDH13-203ENST00000431540 FAM98AQ8NCA5 519 aaKnown RBP7.86□□□□□ -1.15
CDH13-203ENST00000431540 PLPP5Q8NEB5 264 aa7.86□□□□□ -1.15
CDH13-203ENST00000431540 PPHLN1Q8NEY8 458 aaKnown RBP7.86□□□□□ -1.15
CDH13-203ENST00000431540 OR9A1PQ8NGU1 263 aa7.86□□□□□ -1.15
CDH13-203ENST00000431540 BRIX1Q8TDN6 353 aaKnown RBP7.86□□□□□ -1.15
CDH13-203ENST00000431540 NAT14Q8WUY8 206 aa7.86□□□□□ -1.15
CDH13-203ENST00000431540 RERGQ96A58 199 aaPredicted RBP7.86□□□□□ -1.15
CDH13-203ENST00000431540 CCDC120Q96HB5 630 aa7.86□□□□□ -1.15
CDH13-203ENST00000431540 OR2A5Q96R48 311 aa7.86□□□□□ -1.15
CDH13-203ENST00000431540 NRTNQ99748 197 aa7.86□□□□□ -1.15
CDH13-203ENST00000431540 TREX2Q9BQ50 279 aaPredicted RBP7.86□□□□□ -1.15
CDH13-203ENST00000431540 DPH7Q9BTV6 452 aa7.86□□□□□ -1.15
CDH13-203ENST00000431540 DRC3Q9H069 523 aa7.86□□□□□ -1.15
CDH13-203ENST00000431540 ENKD1Q9H0I2 346 aa7.86□□□□□ -1.15
CDH13-203ENST00000431540 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7.86□□□□□ -1.15
CDH13-203ENST00000431540 PCBD2Q9H0N5 130 aa7.86□□□□□ -1.15
CDH13-203ENST00000431540 C10orf88Q9H8K7 445 aa7.86□□□□□ -1.15
CDH13-203ENST00000431540 MRPS30Q9NP92 439 aaKnown RBP7.86□□□□□ -1.15
CDH13-203ENST00000431540 CATSPERZQ9NTU4 200 aa7.86□□□□□ -1.15
CDH13-203ENST00000431540 TMEM184CQ9NVA4 438 aa7.86□□□□□ -1.15
CDH13-203ENST00000431540 PAK5Q9P286 719 aa7.86□□□□□ -1.15
CDH13-203ENST00000431540 PTGFRNQ9P2B2 879 aa7.86□□□□□ -1.15
CDH13-203ENST00000431540 TTC7AQ9ULT0 858 aaPredicted RBP7.86□□□□□ -1.15
CDH13-203ENST00000431540 ZKSCAN5Q9Y2L8 839 aa7.86□□□□□ -1.15
CDH13-203ENST00000431540 TCAF1Q9Y4C2 921 aa7.86□□□□□ -1.15
CDH13-203ENST00000431540 COMMD10Q9Y6G5 202 aa7.86□□□□□ -1.15
CDH13-203ENST00000431540 LOC105369274A0A096LPK9 316 aa7.85□□□□□ -1.15
CDH13-203ENST00000431540 LOC102723532A0A0G2JNH3 316 aa7.85□□□□□ -1.15
CDH13-203ENST00000431540 A0A0J9YVX5 310 aa7.85□□□□□ -1.15
CDH13-203ENST00000431540 A0A1W2PPV9 198 aa7.85□□□□□ -1.15
CDH13-203ENST00000431540 MACROD2A1Z1Q3 448 aa7.85□□□□□ -1.15
CDH13-203ENST00000431540 FAM221AA4D161 298 aa7.85□□□□□ -1.15
CDH13-203ENST00000431540 SYNDIG1LA6NDD5 238 aa7.85□□□□□ -1.15
CDH13-203ENST00000431540 SOWAHDA6NJG2 315 aa7.85□□□□□ -1.15
CDH13-203ENST00000431540 FOXO6A8MYZ6 492 aa7.85□□□□□ -1.15
CDH13-203ENST00000431540 E7EVH7 732 aa7.85□□□□□ -1.15
CDH13-203ENST00000431540 E9PLN8 166 aa7.85□□□□□ -1.15
CDH13-203ENST00000431540 H0YGG7 62 aa7.85□□□□□ -1.15
CDH13-203ENST00000431540 CCL22O00626 93 aa7.85□□□□□ -1.15
CDH13-203ENST00000431540 TTI1O43156 1089 aa7.85□□□□□ -1.15
CDH13-203ENST00000431540 ALOX12BO75342 701 aa7.85□□□□□ -1.15
CDH13-203ENST00000431540 PSIP1O75475 530 aaKnown RBP7.85□□□□□ -1.15
CDH13-203ENST00000431540 NDUFS3O75489 264 aa7.85□□□□□ -1.15
CDH13-203ENST00000431540 UNC5CO95185 931 aa7.85□□□□□ -1.15
CDH13-203ENST00000431540 NSA2O95478 260 aaKnown RBP7.85□□□□□ -1.15
CDH13-203ENST00000431540 CLDN14O95500 239 aa7.85□□□□□ -1.15
CDH13-203ENST00000431540 WDPCPO95876 746 aa7.85□□□□□ -1.15
CDH13-203ENST00000431540 ESRRAP11474 423 aaPredicted RBP7.85□□□□□ -1.15
CDH13-203ENST00000431540 NAP1L1P55209 391 aaKnown RBP7.85□□□□□ -1.15
CDH13-203ENST00000431540 ARF3P61204 181 aaPredicted RBP7.85□□□□□ -1.15
CDH13-203ENST00000431540 SNRPNP63162 240 aaKnown RBP7.85□□□□□ -1.15
CDH13-203ENST00000431540 SKP1P63208 163 aa7.85□□□□□ -1.15
CDH13-203ENST00000431540 MPP1Q00013 466 aa7.85□□□□□ -1.15
CDH13-203ENST00000431540 OASLQ15646 514 aaKnown RBP7.85□□□□□ -1.15
CDH13-203ENST00000431540 MEP1AQ16819 746 aa7.85□□□□□ -1.15
CDH13-203ENST00000431540 FRMPD2BQ6IN97 320 aa7.85□□□□□ -1.15
CDH13-203ENST00000431540 LRRC8EQ6NSJ5 796 aa7.85□□□□□ -1.15
CDH13-203ENST00000431540 LRRC8BQ6P9F7 803 aa7.85□□□□□ -1.15
CDH13-203ENST00000431540 PPP1R21Q6ZMI0 780 aa7.85□□□□□ -1.15
CDH13-203ENST00000431540 PEX26Q7Z412 305 aa7.85□□□□□ -1.15
CDH13-203ENST00000431540 PAQR7Q86WK9 346 aa7.85□□□□□ -1.15
CDH13-203ENST00000431540 SPPL2CQ8IUH8 684 aa7.85□□□□□ -1.15
CDH13-203ENST00000431540 VRK3Q8IV63 474 aa7.85□□□□□ -1.15
CDH13-203ENST00000431540 OR4N4Q8N0Y3 316 aa7.85□□□□□ -1.15
CDH13-203ENST00000431540 AMER3Q8N944 861 aa7.85□□□□□ -1.15
CDH13-203ENST00000431540 POGLUT1Q8NBL1 392 aa7.85□□□□□ -1.15
CDH13-203ENST00000431540 OR52K1Q8NGK4 314 aa7.85□□□□□ -1.15
CDH13-203ENST00000431540 ALG3Q92685 438 aa7.85□□□□□ -1.15
CDH13-203ENST00000431540 HES6Q96HZ4 224 aa7.85□□□□□ -1.15
CDH13-203ENST00000431540 CABS1Q96KC9 395 aa7.85□□□□□ -1.15
CDH13-203ENST00000431540 GPR137Q96N19 417 aa7.85□□□□□ -1.15
CDH13-203ENST00000431540 CYTH2Q99418 400 aa7.85□□□□□ -1.15
CDH13-203ENST00000431540 VKORC1Q9BQB6 163 aa7.85□□□□□ -1.15
CDH13-203ENST00000431540 TMEM121Q9BTD3 319 aa7.85□□□□□ -1.15
CDH13-203ENST00000431540 SARGQ9BW04 601 aa7.85□□□□□ -1.15
CDH13-203ENST00000431540 KIFC1Q9BW19 673 aa7.85□□□□□ -1.15
CDH13-203ENST00000431540 TSGA10Q9BZW7 698 aa7.85□□□□□ -1.15
CDH13-203ENST00000431540 GOLPH3Q9H4A6 298 aa7.85□□□□□ -1.15
CDH13-203ENST00000431540 TRIM45Q9H8W5 580 aaPredicted RBP7.85□□□□□ -1.15
CDH13-203ENST00000431540 ETNK1Q9HBU6 452 aa7.85□□□□□ -1.15
CDH13-203ENST00000431540 MMP25Q9NPA2 562 aa7.85□□□□□ -1.15
CDH13-203ENST00000431540 TREX1Q9NSU2 369 aa7.85□□□□□ -1.15
CDH13-203ENST00000431540 BFARQ9NZS9 450 aa7.85□□□□□ -1.15
CDH13-203ENST00000431540 IMPACTQ9P2X3 320 aa7.85□□□□□ -1.15
CDH13-203ENST00000431540 TRPC4Q9UBN4 977 aa7.85□□□□□ -1.15
CDH13-203ENST00000431540 TRGV8A0A0C4DH27 118 aa7.84□□□□□ -1.15
CDH13-203ENST00000431540 GFYI3L273 518 aa7.84□□□□□ -1.15
CDH13-203ENST00000431540 MASP2O00187 686 aa7.84□□□□□ -1.15
CDH13-203ENST00000431540 FANCGO15287 622 aa7.84□□□□□ -1.15
CDH13-203ENST00000431540 FOXS1O43638 330 aa7.84□□□□□ -1.15
CDH13-203ENST00000431540 SLC19A2O60779 497 aa7.84□□□□□ -1.15
CDH13-203ENST00000431540 CATP04040 527 aaKnown RBP7.84□□□□□ -1.15
CDH13-203ENST00000431540 PRSS56P0CW18 603 aa7.84□□□□□ -1.15
CDH13-203ENST00000431540 C8orf89P0DMQ9 161 aa7.84□□□□□ -1.15
CDH13-203ENST00000431540 ENO3P13929 434 aaPredicted RBP7.84□□□□□ -1.15
CDH13-203ENST00000431540 OGNP20774 298 aaKnown RBP7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms