RNA–Protein interactions for RNA: ENST00000431352.1

SEC13-211, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 5

Gene SEC13, Length 832 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-211ENST00000431352 NR4A3Q92570 626 aa13.19□□□□□ -0.3
SEC13-211ENST00000431352 CCDC68Q9H2F9 335 aa13.19□□□□□ -0.3
SEC13-211ENST00000431352 SH3BGRL2Q9UJC5 107 aa13.19□□□□□ -0.3
SEC13-211ENST00000431352 VPS9D1Q9Y2B5 631 aa13.19□□□□□ -0.3
SEC13-211ENST00000431352 ZGRF1Q86YA3 2104 aa13.19□□□□□ -0.3
SEC13-211ENST00000431352 TRGV8A0A0C4DH27 118 aa13.18□□□□□ -0.3
SEC13-211ENST00000431352 A0A1B0GUH1 482 aa13.18□□□□□ -0.3
SEC13-211ENST00000431352 H7BY64 318 aa13.18□□□□□ -0.3
SEC13-211ENST00000431352 PCDH17O14917 1159 aa13.18□□□□□ -0.3
SEC13-211ENST00000431352 KIF5CO60282 957 aa13.18□□□□□ -0.3
SEC13-211ENST00000431352 SEC24DO94855 1032 aaPredicted RBP13.18□□□□□ -0.3
SEC13-211ENST00000431352 UNC5CO95185 931 aa13.18□□□□□ -0.3
SEC13-211ENST00000431352 STSP08842 583 aa13.18□□□□□ -0.3
SEC13-211ENST00000431352 TNFRSF8P28908 595 aa13.18□□□□□ -0.3
SEC13-211ENST00000431352 HSD17B2P37059 387 aa13.18□□□□□ -0.3
SEC13-211ENST00000431352 AVPR1BP47901 424 aa13.18□□□□□ -0.3
SEC13-211ENST00000431352 ST13P50502 369 aaKnown RBP13.18□□□□□ -0.3
SEC13-211ENST00000431352 TDGF1P3P51864 188 aa13.18□□□□□ -0.3
SEC13-211ENST00000431352 PMP22Q01453 160 aa13.18□□□□□ -0.3
SEC13-211ENST00000431352 ZNF33BQ06732 778 aa13.18□□□□□ -0.3
SEC13-211ENST00000431352 NDUFA9Q16795 377 aa13.18□□□□□ -0.3
SEC13-211ENST00000431352 ABHD17BQ5VST6 288 aa13.18□□□□□ -0.3
SEC13-211ENST00000431352 RPUSD3Q6P087 351 aaKnown RBP13.18□□□□□ -0.3
SEC13-211ENST00000431352 LANCL3Q6ZV70 420 aa13.18□□□□□ -0.3
SEC13-211ENST00000431352 PRSS41Q7RTY9 318 aa13.18□□□□□ -0.3
SEC13-211ENST00000431352 PIWIL4Q7Z3Z4 852 aaKnown RBP13.18□□□□□ -0.3
SEC13-211ENST00000431352 TICAM1Q8IUC6 712 aa13.18□□□□□ -0.3
SEC13-211ENST00000431352 CPNE9Q8IYJ1 553 aa13.18□□□□□ -0.3
SEC13-211ENST00000431352 SHISA5Q8N114 240 aa13.18□□□□□ -0.3
SEC13-211ENST00000431352 ZCCHC10Q8TBK6 192 aa13.18□□□□□ -0.3
SEC13-211ENST00000431352 PRAP1Q96NZ9 151 aa13.18□□□□□ -0.3
SEC13-211ENST00000431352 GPR21Q99679 349 aa13.18□□□□□ -0.3
SEC13-211ENST00000431352 MACROD1Q9BQ69 325 aa13.18□□□□□ -0.3
SEC13-211ENST00000431352 ZNF700Q9H0M5 742 aa13.18□□□□□ -0.3
SEC13-211ENST00000431352 INTS10Q9NVR2 710 aaKnown RBP13.18□□□□□ -0.3
SEC13-211ENST00000431352 HCN3Q9P1Z3 774 aa13.18□□□□□ -0.3
SEC13-211ENST00000431352 COPG2Q9UBF2 871 aa13.18□□□□□ -0.3
SEC13-211ENST00000431352 MED16Q9Y2X0 877 aa13.18□□□□□ -0.3
SEC13-211ENST00000431352 LOC102723996A0A087X1L8 192 aa13.17□□□□□ -0.3
SEC13-211ENST00000431352 A8MUI8 341 aa13.17□□□□□ -0.3
SEC13-211ENST00000431352 TXNDC9O14530 226 aa13.17□□□□□ -0.3
SEC13-211ENST00000431352 HNRNPRO43390 633 aaKnown RBP13.17□□□□□ -0.3
SEC13-211ENST00000431352 RASAL1O95294 804 aa13.17□□□□□ -0.3
SEC13-211ENST00000431352 KRT14P02533 472 aa13.17□□□□□ -0.3
SEC13-211ENST00000431352 PRF1P14222 555 aa13.17□□□□□ -0.3
SEC13-211ENST00000431352 IL1RNP18510 177 aa13.17□□□□□ -0.3
SEC13-211ENST00000431352 IMPA1P29218 277 aa13.17□□□□□ -0.3
SEC13-211ENST00000431352 SLC1A2P43004 574 aa13.17□□□□□ -0.3
SEC13-211ENST00000431352 TBPL1P62380 186 aa13.17□□□□□ -0.3
SEC13-211ENST00000431352 ABATP80404 500 aa13.17□□□□□ -0.3
SEC13-211ENST00000431352 MPP1Q00013 466 aa13.17□□□□□ -0.3
SEC13-211ENST00000431352 NAA30Q147X3 362 aaPredicted RBP13.17□□□□□ -0.3
SEC13-211ENST00000431352 INAQ16352 499 aa13.17□□□□□ -0.3
SEC13-211ENST00000431352 ZNF324BQ6AW86 544 aaPredicted RBP13.17□□□□□ -0.3
SEC13-211ENST00000431352 FCRLBQ6BAA4 426 aa13.17□□□□□ -0.3
SEC13-211ENST00000431352 ZNF549Q6P9A3 640 aa13.17□□□□□ -0.3
SEC13-211ENST00000431352 RIPOR1Q6ZS17 1223 aa13.17□□□□□ -0.3
SEC13-211ENST00000431352 UBE2R2Q712K3 238 aaPredicted RBP13.17□□□□□ -0.3
SEC13-211ENST00000431352 CAND1Q86VP6 1230 aaKnown RBP13.17□□□□□ -0.3
SEC13-211ENST00000431352 ARHGEF39Q8N4T4 335 aa13.17□□□□□ -0.3
SEC13-211ENST00000431352 SUN3Q8TAQ9 357 aa13.17□□□□□ -0.3
SEC13-211ENST00000431352 METTL21AQ8WXB1 218 aa13.17□□□□□ -0.3
SEC13-211ENST00000431352 ALKBH8Q96BT7 664 aaKnown RBP13.17□□□□□ -0.3
SEC13-211ENST00000431352 EBNA1BP2Q99848 306 aaKnown RBP13.17□□□□□ -0.3
SEC13-211ENST00000431352 RBCK1Q9BYM8 510 aa13.17□□□□□ -0.3
SEC13-211ENST00000431352 UNKQ9C0B0 810 aaKnown RBP13.17□□□□□ -0.3
SEC13-211ENST00000431352 TGIF2Q9GZN2 237 aa13.17□□□□□ -0.3
SEC13-211ENST00000431352 VN1R1Q9GZP7 353 aa13.17□□□□□ -0.3
SEC13-211ENST00000431352 CCDC177Q9NQR7 707 aaPredicted RBP13.17□□□□□ -0.3
SEC13-211ENST00000431352 C20orf96Q9NUD7 363 aaPredicted RBP13.17□□□□□ -0.3
SEC13-211ENST00000431352 ENTPD4Q9Y227 616 aa13.17□□□□□ -0.3
SEC13-211ENST00000431352 MAD1L1Q9Y6D9 718 aa13.17□□□□□ -0.3
SEC13-211ENST00000431352 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.16□□□□□ -0.3
SEC13-211ENST00000431352 FAM237BA0A1B0GVD1 139 aa13.16□□□□□ -0.3
SEC13-211ENST00000431352 A0A1W2PQ72 361 aa13.16□□□□□ -0.3
SEC13-211ENST00000431352 OR5H15A6NDH6 313 aa13.16□□□□□ -0.3
SEC13-211ENST00000431352 OR2W5A6NFC9 320 aa13.16□□□□□ -0.3
SEC13-211ENST00000431352 SGK494L7N484 410 aa13.16□□□□□ -0.3
SEC13-211ENST00000431352 CCDC175P0C221 793 aa13.16□□□□□ -0.3
SEC13-211ENST00000431352 MPC1LP0DKB6 136 aa13.16□□□□□ -0.3
SEC13-211ENST00000431352 ENO3P13929 434 aaPredicted RBP13.16□□□□□ -0.3
SEC13-211ENST00000431352 MST1P26927 711 aa13.16□□□□□ -0.3
SEC13-211ENST00000431352 BTBD16Q32M84 506 aa13.16□□□□□ -0.3
SEC13-211ENST00000431352 TTC27Q6P3X3 843 aa13.16□□□□□ -0.3
SEC13-211ENST00000431352 TMEM205Q6UW68 189 aa13.16□□□□□ -0.3
SEC13-211ENST00000431352 MBOAT1Q6ZNC8 495 aa13.16□□□□□ -0.3
SEC13-211ENST00000431352 VN1R4Q7Z5H5 301 aa13.16□□□□□ -0.3
SEC13-211ENST00000431352 LRRC56Q8IYG6 542 aaPredicted RBP13.16□□□□□ -0.3
SEC13-211ENST00000431352 SLC34A3Q8N130 599 aa13.16□□□□□ -0.3
SEC13-211ENST00000431352 CD200R1Q8TD46 325 aa13.16□□□□□ -0.3
SEC13-211ENST00000431352 ASB11Q8WXH4 323 aa13.16□□□□□ -0.3
SEC13-211ENST00000431352 KCNJ9Q92806 393 aa13.16□□□□□ -0.3
SEC13-211ENST00000431352 HAS2Q92819 552 aa13.16□□□□□ -0.3
SEC13-211ENST00000431352 NDNQ99608 321 aa13.16□□□□□ -0.3
SEC13-211ENST00000431352 TUBB6Q9BUF5 446 aa13.16□□□□□ -0.3
SEC13-211ENST00000431352 SH2B3Q9UQQ2 575 aa13.16□□□□□ -0.3
SEC13-211ENST00000431352 HEATR5BQ9P2D3 2071 aa13.16□□□□□ -0.3
SEC13-211ENST00000431352 CPAMD8Q8IZJ3 1885 aa13.15□□□□□ -0.3
SEC13-211ENST00000431352 ZCWPW2A0A1B0GU75 182 aa13.15□□□□□ -0.3
SEC13-211ENST00000431352 FEZF1A0PJY2 475 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms