RNA–Protein interactions for RNA: ENST00000429713.6

SYNPO2-202, Transcript of synaptopodin 2, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2, Length 9,920 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-202ENST00000429713 RERGLQ9H628 205 aa7.34□□□□□ -1.23
SYNPO2-202ENST00000429713 LDAHQ9H6V9 325 aa7.34□□□□□ -1.23
SYNPO2-202ENST00000429713 SLC28A3Q9HAS3 691 aa7.34□□□□□ -1.23
SYNPO2-202ENST00000429713 CKLFQ9UBR5 152 aa7.34□□□□□ -1.23
SYNPO2-202ENST00000429713 NOX1Q9Y5S8 564 aa7.34□□□□□ -1.23
SYNPO2-202ENST00000429713 DOCK3Q8IZD9 2030 aa7.34□□□□□ -1.23
SYNPO2-202ENST00000429713 SLC1A7O00341 560 aa7.34□□□□□ -1.23
SYNPO2-202ENST00000429713 HRGP04196 525 aa7.34□□□□□ -1.23
SYNPO2-202ENST00000429713 GM2AP17900 193 aa7.34□□□□□ -1.23
SYNPO2-202ENST00000429713 KLRC2P26717 231 aa7.34□□□□□ -1.23
SYNPO2-202ENST00000429713 CHI3L1P36222 383 aaPredicted RBP7.34□□□□□ -1.23
SYNPO2-202ENST00000429713 CNTN2Q02246 1040 aa7.34□□□□□ -1.23
SYNPO2-202ENST00000429713 SPDYE7PQ495Y7 208 aa7.34□□□□□ -1.23
SYNPO2-202ENST00000429713 SYTL3Q4VX76 610 aa7.34□□□□□ -1.23
SYNPO2-202ENST00000429713 C1orf189Q5VU69 101 aa7.34□□□□□ -1.23
SYNPO2-202ENST00000429713 LLGL2Q6P1M3 1020 aa7.34□□□□□ -1.23
SYNPO2-202ENST00000429713 QSOX2Q6ZRP7 698 aa7.34□□□□□ -1.23
SYNPO2-202ENST00000429713 ADGRG3Q86Y34 549 aa7.34□□□□□ -1.23
SYNPO2-202ENST00000429713 ASB7Q9H672 318 aa7.34□□□□□ -1.23
SYNPO2-202ENST00000429713 MED9Q9NWA0 146 aa7.34□□□□□ -1.23
SYNPO2-202ENST00000429713 CHRM5P08912 532 aaPredicted RBP7.34□□□□□ -1.24
SYNPO2-202ENST00000429713 NRIP1P48552 1158 aa7.34□□□□□ -1.24
SYNPO2-202ENST00000429713 TANGO2Q6ICL3 276 aa7.34□□□□□ -1.24
SYNPO2-202ENST00000429713 HIST2H3AQ71DI3 136 aa7.34□□□□□ -1.24
SYNPO2-202ENST00000429713 ZNF607Q96SK3 696 aa7.34□□□□□ -1.24
SYNPO2-202ENST00000429713 A0A1B0GVC2 190 aa7.33□□□□□ -1.24
SYNPO2-202ENST00000429713 IQCMA0A1B0GVH7 501 aa7.33□□□□□ -1.24
SYNPO2-202ENST00000429713 ACKR2O00590 384 aa7.33□□□□□ -1.24
SYNPO2-202ENST00000429713 LTFP02788 710 aa7.33□□□□□ -1.24
SYNPO2-202ENST00000429713 FABP3P05413 133 aa7.33□□□□□ -1.24
SYNPO2-202ENST00000429713 CSN2P05814 226 aa7.33□□□□□ -1.24
SYNPO2-202ENST00000429713 CYP4B1P13584 511 aa7.33□□□□□ -1.24
SYNPO2-202ENST00000429713 RNF4P78317 190 aa7.33□□□□□ -1.24
SYNPO2-202ENST00000429713 CIR1Q86X95 450 aaPredicted RBP7.33□□□□□ -1.24
SYNPO2-202ENST00000429713 AGBL3Q8NEM8 1001 aa7.33□□□□□ -1.24
SYNPO2-202ENST00000429713 SNRNP25Q9BV90 132 aaKnown RBP7.33□□□□□ -1.24
SYNPO2-202ENST00000429713 DPY30Q9C005 99 aa7.33□□□□□ -1.24
SYNPO2-202ENST00000429713 LYRM2Q9NU23 88 aaPredicted RBP7.33□□□□□ -1.24
SYNPO2-202ENST00000429713 INTS7Q9NVH2 962 aaKnown RBP7.33□□□□□ -1.24
SYNPO2-202ENST00000429713 OR5K3A6NET4 321 aa7.33□□□□□ -1.24
SYNPO2-202ENST00000429713 UROSP10746 265 aa7.33□□□□□ -1.24
SYNPO2-202ENST00000429713 PRKCAP17252 672 aa7.33□□□□□ -1.24
SYNPO2-202ENST00000429713 ERVK-8P63133 956 aa7.33□□□□□ -1.24
SYNPO2-202ENST00000429713 DSG4Q86SJ6 1040 aa7.33□□□□□ -1.24
SYNPO2-202ENST00000429713 C11orf65Q8NCR3 313 aa7.33□□□□□ -1.24
SYNPO2-202ENST00000429713 MRPS31Q92665 395 aaKnown RBP7.33□□□□□ -1.24
SYNPO2-202ENST00000429713 KCNJ9Q92806 393 aa7.33□□□□□ -1.24
SYNPO2-202ENST00000429713 ACO2Q99798 780 aaKnown RBP7.33□□□□□ -1.24
SYNPO2-202ENST00000429713 AKIP1Q9NQ31 210 aa7.33□□□□□ -1.24
SYNPO2-202ENST00000429713 NUDT15Q9NV35 164 aa7.33□□□□□ -1.24
SYNPO2-202ENST00000429713 ADAMTS6Q9UKP5 1117 aa7.33□□□□□ -1.24
SYNPO2-202ENST00000429713 TAF1LQ8IZX4 1826 aa7.33□□□□□ -1.24
SYNPO2-202ENST00000429713 SIGLEC6O43699 453 aa7.33□□□□□ -1.24
SYNPO2-202ENST00000429713 B3GAT3O94766 335 aa7.33□□□□□ -1.24
SYNPO2-202ENST00000429713 RAF1P04049 648 aa7.33□□□□□ -1.24
SYNPO2-202ENST00000429713 USP17L7P0C7H9 530 aa7.33□□□□□ -1.24
SYNPO2-202ENST00000429713 CCR1P32246 355 aa7.33□□□□□ -1.24
SYNPO2-202ENST00000429713 CDKL1Q00532 357 aa7.33□□□□□ -1.24
SYNPO2-202ENST00000429713 SERPINA13PQ6UXR4 307 aa7.33□□□□□ -1.24
SYNPO2-202ENST00000429713 CADM2Q8N3J6 435 aa7.33□□□□□ -1.24
SYNPO2-202ENST00000429713 HSPA12BQ96MM6 686 aa7.33□□□□□ -1.24
SYNPO2-202ENST00000429713 GFM1Q96RP9 751 aaKnown RBP7.33□□□□□ -1.24
SYNPO2-202ENST00000429713 MTERF1Q99551 399 aaKnown RBP7.33□□□□□ -1.24
SYNPO2-202ENST00000429713 TIGARQ9NQ88 270 aa7.33□□□□□ -1.24
SYNPO2-202ENST00000429713 EGFL7Q9UHF1 273 aa7.33□□□□□ -1.24
SYNPO2-202ENST00000429713 FAM159BA6NKW6 160 aa7.33□□□□□ -1.24
SYNPO2-202ENST00000429713 OR2AT4A6NND4 320 aa7.33□□□□□ -1.24
SYNPO2-202ENST00000429713 OR6B1O95007 311 aa7.33□□□□□ -1.24
SYNPO2-202ENST00000429713 HTR1EP28566 365 aa7.33□□□□□ -1.24
SYNPO2-202ENST00000429713 SRP9P49458 86 aaKnown RBP7.33□□□□□ -1.24
SYNPO2-202ENST00000429713 ACTBP60709 375 aa7.33□□□□□ -1.24
SYNPO2-202ENST00000429713 AP1S1P61966 158 aa7.33□□□□□ -1.24
SYNPO2-202ENST00000429713 FKBP1AP62942 108 aaKnown RBP7.33□□□□□ -1.24
SYNPO2-202ENST00000429713 ACTG1P63261 375 aa7.33□□□□□ -1.24
SYNPO2-202ENST00000429713 GPR19Q15760 415 aa7.33□□□□□ -1.24
SYNPO2-202ENST00000429713 KLHL24Q6TFL4 600 aa7.33□□□□□ -1.24
SYNPO2-202ENST00000429713 CEP68Q76N32 757 aa7.33□□□□□ -1.24
SYNPO2-202ENST00000429713 OAFQ86UD1 273 aa7.33□□□□□ -1.24
SYNPO2-202ENST00000429713 FBXO16Q8IX29 292 aaPredicted RBP7.33□□□□□ -1.24
SYNPO2-202ENST00000429713 LRTOMTQ8WZ04 291 aa7.33□□□□□ -1.24
SYNPO2-202ENST00000429713 PHYHIPLQ96FC7 376 aa7.33□□□□□ -1.24
SYNPO2-202ENST00000429713 SLC4A9Q96Q91 983 aa7.33□□□□□ -1.24
SYNPO2-202ENST00000429713 ZSCAN32Q9NX65 697 aa7.33□□□□□ -1.24
SYNPO2-202ENST00000429713 EBF1Q9UH73 591 aa7.33□□□□□ -1.24
SYNPO2-202ENST00000429713 POMT1Q9Y6A1 747 aa7.33□□□□□ -1.24
SYNPO2-202ENST00000429713 A0A0J9YYE9 177 aa7.33□□□□□ -1.24
SYNPO2-202ENST00000429713 BHMG1C9JSJ3 638 aaPredicted RBP7.33□□□□□ -1.24
SYNPO2-202ENST00000429713 SDC3O75056 442 aa7.33□□□□□ -1.24
SYNPO2-202ENST00000429713 ADAM11O75078 769 aa7.33□□□□□ -1.24
SYNPO2-202ENST00000429713 LRCH4O75427 683 aa7.33□□□□□ -1.24
SYNPO2-202ENST00000429713 C4BPAP04003 597 aaKnown RBP7.33□□□□□ -1.24
SYNPO2-202ENST00000429713 NOS2P35228 1153 aa7.33□□□□□ -1.24
SYNPO2-202ENST00000429713 CPT1AP50416 773 aa7.33□□□□□ -1.24
SYNPO2-202ENST00000429713 TATDN3Q17R31 274 aa7.33□□□□□ -1.24
SYNPO2-202ENST00000429713 C10orf120Q5SQS8 335 aa7.33□□□□□ -1.24
SYNPO2-202ENST00000429713 C3P1Q6ZMU1 363 aa7.33□□□□□ -1.24
SYNPO2-202ENST00000429713 MTURNQ8N3F0 131 aa7.33□□□□□ -1.24
SYNPO2-202ENST00000429713 RAB42Q8N4Z0 105 aa7.33□□□□□ -1.24
SYNPO2-202ENST00000429713 COPS5Q92905 334 aa7.33□□□□□ -1.24
SYNPO2-202ENST00000429713 BTBD1Q9H0C5 482 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms