RNA–Protein interactions for RNA: ENST00000428696.6

SGCE-204, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,409 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-204ENST00000428696 TTC29Q8NA56 475 aaPredicted RBP13.93□□□□□ -0.18
SGCE-204ENST00000428696 ZNF740Q8NDX6 193 aa13.93□□□□□ -0.18
SGCE-204ENST00000428696 NLGN4YQ8NFZ3 816 aaPredicted RBP13.93□□□□□ -0.18
SGCE-204ENST00000428696 PPP4R1Q8TF05 950 aa13.93□□□□□ -0.18
SGCE-204ENST00000428696 NLNQ9BYT8 704 aa13.93□□□□□ -0.18
SGCE-204ENST00000428696 CHRNA10Q9GZZ6 450 aa13.93□□□□□ -0.18
SGCE-204ENST00000428696 ACSS2Q9NR19 701 aa13.93□□□□□ -0.18
SGCE-204ENST00000428696 DHCR7Q9UBM7 475 aaKnown RBP13.93□□□□□ -0.18
SGCE-204ENST00000428696 LGALS13Q9UHV8 139 aa13.93□□□□□ -0.18
SGCE-204ENST00000428696 PILRAQ9UKJ1 303 aa13.93□□□□□ -0.18
SGCE-204ENST00000428696 PADI1Q9ULC6 663 aa13.93□□□□□ -0.18
SGCE-204ENST00000428696 TNPO3Q9Y5L0 923 aaKnown RBP13.93□□□□□ -0.18
SGCE-204ENST00000428696 AP1M2Q9Y6Q5 423 aa13.93□□□□□ -0.18
SGCE-204ENST00000428696 HYKKA2RU49 373 aa13.92□□□□□ -0.18
SGCE-204ENST00000428696 TMEM8BA6NDV4 472 aa13.92□□□□□ -0.18
SGCE-204ENST00000428696 GOLGA6L10A6NI86 522 aa13.92□□□□□ -0.18
SGCE-204ENST00000428696 LCMT2O60294 686 aaKnown RBP13.92□□□□□ -0.18
SGCE-204ENST00000428696 KATNA1O75449 491 aa13.92□□□□□ -0.18
SGCE-204ENST00000428696 MSL3P1P0C860 447 aa13.92□□□□□ -0.18
SGCE-204ENST00000428696 GABRA4P48169 554 aa13.92□□□□□ -0.18
SGCE-204ENST00000428696 ATP1A2P50993 1020 aa13.92□□□□□ -0.18
SGCE-204ENST00000428696 RPS15AP62244 130 aaKnown RBP13.92□□□□□ -0.18
SGCE-204ENST00000428696 SLBPQ14493 270 aaKnown RBP eCLIP13.92□□□□□ -0.18
SGCE-204ENST00000428696 GRM7Q14831 915 aa13.92□□□□□ -0.18
SGCE-204ENST00000428696 TLDC1Q6P9B6 456 aa13.92□□□□□ -0.18
SGCE-204ENST00000428696 RNF44Q7L0R7 432 aa13.92□□□□□ -0.18
SGCE-204ENST00000428696 LRRC70Q7Z2Q7 622 aa13.92□□□□□ -0.18
SGCE-204ENST00000428696 VASH2Q86V25 355 aa13.92□□□□□ -0.18
SGCE-204ENST00000428696 TRABD2AQ86V40 505 aa13.92□□□□□ -0.18
SGCE-204ENST00000428696 METTL27Q8N6F8 245 aaPredicted RBP13.92□□□□□ -0.18
SGCE-204ENST00000428696 SLC38A9Q8NBW4 561 aa13.92□□□□□ -0.18
SGCE-204ENST00000428696 ABHD11Q8NFV4 315 aa13.92□□□□□ -0.18
SGCE-204ENST00000428696 HNRNPLLQ8WVV9 542 aaKnown RBP13.92□□□□□ -0.18
SGCE-204ENST00000428696 CCT6BQ92526 530 aa13.92□□□□□ -0.18
SGCE-204ENST00000428696 TMEM109Q9BVC6 243 aa13.92□□□□□ -0.18
SGCE-204ENST00000428696 YIPF2Q9BWQ6 316 aa13.92□□□□□ -0.18
SGCE-204ENST00000428696 B3GNT4Q9C0J1 378 aa13.92□□□□□ -0.18
SGCE-204ENST00000428696 DKK4Q9UBT3 224 aa13.92□□□□□ -0.18
SGCE-204ENST00000428696 ZMIZ1Q9ULJ6 1067 aa13.92□□□□□ -0.18
SGCE-204ENST00000428696 TMCO1Q9UM00 188 aa13.92□□□□□ -0.18
SGCE-204ENST00000428696 KLK4Q9Y5K2 254 aa13.92□□□□□ -0.18
SGCE-204ENST00000428696 MEN1O00255 615 aa13.91□□□□□ -0.18
SGCE-204ENST00000428696 TAF4O00268 1085 aa13.91□□□□□ -0.18
SGCE-204ENST00000428696 HBQ1P09105 142 aa13.91□□□□□ -0.18
SGCE-204ENST00000428696 MYZAPP0CAP1 466 aa13.91□□□□□ -0.18
SGCE-204ENST00000428696 MYL2P10916 166 aa13.91□□□□□ -0.18
SGCE-204ENST00000428696 LIPCP11150 499 aa13.91□□□□□ -0.18
SGCE-204ENST00000428696 TSPAN8P19075 237 aa13.91□□□□□ -0.18
SGCE-204ENST00000428696 CXCR2P25025 360 aa13.91□□□□□ -0.18
SGCE-204ENST00000428696 CRHR1P34998 444 aa13.91□□□□□ -0.18
SGCE-204ENST00000428696 BCL6P41182 706 aa13.91□□□□□ -0.18
SGCE-204ENST00000428696 HNF4AP41235 474 aa13.91□□□□□ -0.18
SGCE-204ENST00000428696 CHIT1Q13231 466 aa13.91□□□□□ -0.18
SGCE-204ENST00000428696 GTF2H2Q13888 395 aa13.91□□□□□ -0.18
SGCE-204ENST00000428696 DOC2AQ14183 400 aa13.91□□□□□ -0.18
SGCE-204ENST00000428696 CASP8Q14790 479 aa13.91□□□□□ -0.18
SGCE-204ENST00000428696 SLC9A5Q14940 896 aa13.91□□□□□ -0.18
SGCE-204ENST00000428696 RBBP7Q16576 425 aa13.91□□□□□ -0.18
SGCE-204ENST00000428696 HIST2H2ACQ16777 129 aaPredicted RBP13.91□□□□□ -0.18
SGCE-204ENST00000428696 ST3GAL2Q16842 350 aa13.91□□□□□ -0.18
SGCE-204ENST00000428696 HKDC1Q2TB90 917 aa13.91□□□□□ -0.18
SGCE-204ENST00000428696 FAM214AQ32MH5 1076 aa13.91□□□□□ -0.18
SGCE-204ENST00000428696 MANEAQ5SRI9 462 aa13.91□□□□□ -0.18
SGCE-204ENST00000428696 HIST2H2AA3Q6FI13 130 aa13.91□□□□□ -0.18
SGCE-204ENST00000428696 GTF2H2CQ6P1K8 395 aa13.91□□□□□ -0.18
SGCE-204ENST00000428696 LRIG3Q6UXM1 1119 aa13.91□□□□□ -0.18
SGCE-204ENST00000428696 SLCO4C1Q6ZQN7 724 aa13.91□□□□□ -0.18
SGCE-204ENST00000428696 CROCCP2Q86T23 111 aa13.91□□□□□ -0.18
SGCE-204ENST00000428696 PROSER1Q86XN7 944 aa13.91□□□□□ -0.18
SGCE-204ENST00000428696 KRT78Q8N1N4 520 aa13.91□□□□□ -0.18
SGCE-204ENST00000428696 ESX1Q8N693 406 aa13.91□□□□□ -0.18
SGCE-204ENST00000428696 CCNYL1Q8N7R7 359 aa13.91□□□□□ -0.18
SGCE-204ENST00000428696 SLC13A3Q8WWT9 602 aa13.91□□□□□ -0.18
SGCE-204ENST00000428696 NKD1Q969G9 470 aa13.91□□□□□ -0.18
SGCE-204ENST00000428696 KIAA1143Q96AT1 154 aaPredicted RBP13.91□□□□□ -0.18
SGCE-204ENST00000428696 OR2A5Q96R48 311 aa13.91□□□□□ -0.18
SGCE-204ENST00000428696 IPPKQ9H8X2 491 aa13.91□□□□□ -0.18
SGCE-204ENST00000428696 ACTR8Q9H981 624 aa13.91□□□□□ -0.18
SGCE-204ENST00000428696 PELI2Q9HAT8 420 aa13.91□□□□□ -0.18
SGCE-204ENST00000428696 KCNK9Q9NPC2 374 aa13.91□□□□□ -0.18
SGCE-204ENST00000428696 CUTCQ9NTM9 273 aa13.91□□□□□ -0.18
SGCE-204ENST00000428696 GPRC5BQ9NZH0 403 aa13.91□□□□□ -0.18
SGCE-204ENST00000428696 PCDHB3Q9Y5E6 796 aa13.91□□□□□ -0.18
SGCE-204ENST00000428696 IGF2RP11717 2491 aa13.91□□□□□ -0.18
SGCE-204ENST00000428696 PCM1Q15154 2024 aa13.91□□□□□ -0.18
SGCE-204ENST00000428696 TRBC2A0A5B9 178 aa13.9□□□□□ -0.18
SGCE-204ENST00000428696 A8MT66 165 aa13.9□□□□□ -0.18
SGCE-204ENST00000428696 NDUFS4O43181 175 aa13.9□□□□□ -0.18
SGCE-204ENST00000428696 DLX3O60479 287 aa13.9□□□□□ -0.18
SGCE-204ENST00000428696 SUPT7LO94864 414 aa13.9□□□□□ -0.18
SGCE-204ENST00000428696 PCNAP12004 261 aa13.9□□□□□ -0.18
SGCE-204ENST00000428696 CPA3P15088 417 aa13.9□□□□□ -0.18
SGCE-204ENST00000428696 TCN2P20062 427 aa13.9□□□□□ -0.18
SGCE-204ENST00000428696 AGXTP21549 392 aa13.9□□□□□ -0.18
SGCE-204ENST00000428696 ATP5F1P24539 256 aaPredicted RBP13.9□□□□□ -0.18
SGCE-204ENST00000428696 ARSFP54793 590 aa13.9□□□□□ -0.18
SGCE-204ENST00000428696 GPS2Q13227 327 aa13.9□□□□□ -0.18
SGCE-204ENST00000428696 CLN3Q13286 438 aa13.9□□□□□ -0.18
SGCE-204ENST00000428696 CCDC153Q494R4 210 aa13.9□□□□□ -0.18
SGCE-204ENST00000428696 BROXQ5VW32 411 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms