RNA–Protein interactions for RNA: ENST00000428626.5

SEC13-210, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-210ENST00000428626 EPS8L2Q9H6S3 715 aa14.73□□□□□ -0.05
SEC13-210ENST00000428626 XAB2Q9HCS7 855 aaKnown RBP14.73□□□□□ -0.05
SEC13-210ENST00000428626 AGPAT4Q9NRZ5 378 aa14.73□□□□□ -0.05
SEC13-210ENST00000428626 C20orf96Q9NUD7 363 aaPredicted RBP14.73□□□□□ -0.05
SEC13-210ENST00000428626 PTGFRNQ9P2B2 879 aa14.73□□□□□ -0.05
SEC13-210ENST00000428626 KLHL42Q9P2K6 505 aa14.73□□□□□ -0.05
SEC13-210ENST00000428626 ADAMTS6Q9UKP5 1117 aa14.73□□□□□ -0.05
SEC13-210ENST00000428626 FBXO5Q9UKT4 447 aa14.73□□□□□ -0.05
SEC13-210ENST00000428626 VPS9D1Q9Y2B5 631 aa14.73□□□□□ -0.05
SEC13-210ENST00000428626 LOC102723996A0A087X1L8 192 aa14.72□□□□□ -0.05
SEC13-210ENST00000428626 NSG1A0A0A6YYJ2 146 aa14.72□□□□□ -0.05
SEC13-210ENST00000428626 MAGEB16A2A368 324 aa14.72□□□□□ -0.05
SEC13-210ENST00000428626 OR2W5A6NFC9 320 aa14.72□□□□□ -0.05
SEC13-210ENST00000428626 BANF1O75531 89 aa14.72□□□□□ -0.05
SEC13-210ENST00000428626 F10P00742 488 aa14.72□□□□□ -0.05
SEC13-210ENST00000428626 GABRB3P28472 473 aa14.72□□□□□ -0.05
SEC13-210ENST00000428626 HSD17B2P37059 387 aa14.72□□□□□ -0.05
SEC13-210ENST00000428626 RELAQ04206 551 aa14.72□□□□□ -0.05
SEC13-210ENST00000428626 SRSF11Q05519 484 aaKnown RBP14.72□□□□□ -0.05
SEC13-210ENST00000428626 LONRF1Q17RB8 773 aa14.72□□□□□ -0.05
SEC13-210ENST00000428626 ZXDCQ2QGD7 858 aaPredicted RBP14.72□□□□□ -0.05
SEC13-210ENST00000428626 HSP90AA5PQ58FG0 334 aa14.72□□□□□ -0.05
SEC13-210ENST00000428626 GARNL3Q5VVW2 1013 aa14.72□□□□□ -0.05
SEC13-210ENST00000428626 ZNF324BQ6AW86 544 aaPredicted RBP14.72□□□□□ -0.05
SEC13-210ENST00000428626 CCDC137Q6PK04 289 aaKnown RBP14.72□□□□□ -0.05
SEC13-210ENST00000428626 ADCK2Q7Z695 626 aa14.72□□□□□ -0.05
SEC13-210ENST00000428626 OR9A4Q8NGU2 314 aa14.72□□□□□ -0.05
SEC13-210ENST00000428626 NDNQ99608 321 aa14.72□□□□□ -0.05
SEC13-210ENST00000428626 SLX1AQ9BQ83 275 aa14.72□□□□□ -0.05
SEC13-210ENST00000428626 AARSD1Q9BTE6 412 aaKnown RBP14.72□□□□□ -0.05
SEC13-210ENST00000428626 DRC3Q9H069 523 aa14.72□□□□□ -0.05
SEC13-210ENST00000428626 CDC14AQ9UNH5 594 aa14.72□□□□□ -0.05
SEC13-210ENST00000428626 MAD1L1Q9Y6D9 718 aa14.72□□□□□ -0.05
SEC13-210ENST00000428626 SCN2AQ99250 2005 aa14.71□□□□□ -0.05
SEC13-210ENST00000428626 LRBAP50851 2863 aa14.71□□□□□ -0.05
SEC13-210ENST00000428626 CCNDBP1O95273 360 aa14.71□□□□□ -0.05
SEC13-210ENST00000428626 SERPINA7P05543 415 aa14.71□□□□□ -0.05
SEC13-210ENST00000428626 HEXBP07686 556 aa14.71□□□□□ -0.05
SEC13-210ENST00000428626 ITGAMP11215 1152 aa14.71□□□□□ -0.05
SEC13-210ENST00000428626 ENO3P13929 434 aaPredicted RBP14.71□□□□□ -0.05
SEC13-210ENST00000428626 PGGT1BP53609 377 aa14.71□□□□□ -0.05
SEC13-210ENST00000428626 TBPL1P62380 186 aa14.71□□□□□ -0.05
SEC13-210ENST00000428626 ABATP80404 500 aa14.71□□□□□ -0.05
SEC13-210ENST00000428626 ELOAQ14241 798 aaKnown RBP14.71□□□□□ -0.05
SEC13-210ENST00000428626 TTLL9Q3SXZ7 439 aa14.71□□□□□ -0.05
SEC13-210ENST00000428626 TMEM205Q6UW68 189 aa14.71□□□□□ -0.05
SEC13-210ENST00000428626 UBE2R2Q712K3 238 aaPredicted RBP14.71□□□□□ -0.05
SEC13-210ENST00000428626 OR1N1Q8NGS0 311 aa14.71□□□□□ -0.05
SEC13-210ENST00000428626 RERGQ96A58 199 aaPredicted RBP14.71□□□□□ -0.05
SEC13-210ENST00000428626 IMMP1LQ96LU5 166 aa14.71□□□□□ -0.05
SEC13-210ENST00000428626 CCDC138Q96M89 665 aa14.71□□□□□ -0.05
SEC13-210ENST00000428626 ZNF700Q9H0M5 742 aa14.71□□□□□ -0.05
SEC13-210ENST00000428626 PLAC1Q9HBJ0 212 aa14.71□□□□□ -0.05
SEC13-210ENST00000428626 MKKSQ9NPJ1 570 aaPredicted RBP14.71□□□□□ -0.05
SEC13-210ENST00000428626 IARS2Q9NSE4 1012 aaKnown RBP14.71□□□□□ -0.05
SEC13-210ENST00000428626 C14orf105Q9NVL8 296 aa14.71□□□□□ -0.05
SEC13-210ENST00000428626 SLC17A6Q9P2U8 582 aa14.71□□□□□ -0.05
SEC13-210ENST00000428626 PDE10AQ9Y233 779 aa14.71□□□□□ -0.05
SEC13-210ENST00000428626 OSGIN2Q9Y236 505 aa14.71□□□□□ -0.05
SEC13-210ENST00000428626 MYO7BQ6PIF6 2116 aa14.71□□□□□ -0.06
SEC13-210ENST00000428626 IGHV3-20A0A0C4DH32 117 aa14.7□□□□□ -0.06
SEC13-210ENST00000428626 ZNF839A8K0R7 811 aa14.7□□□□□ -0.06
SEC13-210ENST00000428626 LRRTM2O43300 516 aa14.7□□□□□ -0.06
SEC13-210ENST00000428626 ZBTB14O43829 449 aa14.7□□□□□ -0.06
SEC13-210ENST00000428626 WISP2O76076 250 aa14.7□□□□□ -0.06
SEC13-210ENST00000428626 BMP10O95393 424 aa14.7□□□□□ -0.06
SEC13-210ENST00000428626 EDN3P14138 238 aa14.7□□□□□ -0.06
SEC13-210ENST00000428626 TNFSF10P50591 281 aa14.7□□□□□ -0.06
SEC13-210ENST00000428626 TDGF1P3P51864 188 aa14.7□□□□□ -0.06
SEC13-210ENST00000428626 CSNK1G2P78368 415 aa14.7□□□□□ -0.06
SEC13-210ENST00000428626 FAM53BQ14153 422 aa14.7□□□□□ -0.06
SEC13-210ENST00000428626 MSS51Q4VC12 460 aa14.7□□□□□ -0.06
SEC13-210ENST00000428626 RBM20Q5T481 1227 aaKnown RBP14.7□□□□□ -0.06
SEC13-210ENST00000428626 RNASEH2BQ5TBB1 312 aaKnown RBP14.7□□□□□ -0.06
SEC13-210ENST00000428626 THEMIS2Q5TEJ8 643 aa14.7□□□□□ -0.06
SEC13-210ENST00000428626 RPUSD3Q6P087 351 aaKnown RBP14.7□□□□□ -0.06
SEC13-210ENST00000428626 LANCL3Q6ZV70 420 aa14.7□□□□□ -0.06
SEC13-210ENST00000428626 IGDCC3Q8IVU1 814 aa14.7□□□□□ -0.06
SEC13-210ENST00000428626 EEF1AKMT1Q8WVE0 214 aa14.7□□□□□ -0.06
SEC13-210ENST00000428626 VPS50Q96JG6 964 aa14.7□□□□□ -0.06
SEC13-210ENST00000428626 PBKQ96KB5 322 aa14.7□□□□□ -0.06
SEC13-210ENST00000428626 VN1R1Q9GZP7 353 aa14.7□□□□□ -0.06
SEC13-210ENST00000428626 CCDC68Q9H2F9 335 aa14.7□□□□□ -0.06
SEC13-210ENST00000428626 MKL2Q9ULH7 1088 aa14.7□□□□□ -0.06
SEC13-210ENST00000428626 JRKLQ9Y4A0 524 aa14.7□□□□□ -0.06
SEC13-210ENST00000428626 CSMD1Q96PZ7 3565 aa14.7□□□□□ -0.06
SEC13-210ENST00000428626 PRPF4O43172 522 aaKnown RBP eCLIP14.69□□□□□ -0.06
SEC13-210ENST00000428626 LCMT2O60294 686 aaKnown RBP14.69□□□□□ -0.06
SEC13-210ENST00000428626 ANXA5P08758 320 aa14.69□□□□□ -0.06
SEC13-210ENST00000428626 IL1RNP18510 177 aa14.69□□□□□ -0.06
SEC13-210ENST00000428626 CXCR2P25025 360 aa14.69□□□□□ -0.06
SEC13-210ENST00000428626 CDKN2DP55273 166 aa14.69□□□□□ -0.06
SEC13-210ENST00000428626 ARG2P78540 354 aa14.69□□□□□ -0.06
SEC13-210ENST00000428626 CRYMQ14894 314 aa14.69□□□□□ -0.06
SEC13-210ENST00000428626 PHKG1Q16816 387 aa14.69□□□□□ -0.06
SEC13-210ENST00000428626 PAQR3Q6TCH7 311 aa14.69□□□□□ -0.06
SEC13-210ENST00000428626 PDSS2Q86YH6 399 aa14.69□□□□□ -0.06
SEC13-210ENST00000428626 SERBP1Q8NC51 408 aaKnown RBP eCLIP14.69□□□□□ -0.06
SEC13-210ENST00000428626 C2CD4AQ8NCU7 369 aaPredicted RBP14.69□□□□□ -0.06
SEC13-210ENST00000428626 HAS2Q92819 552 aa14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms