RNA–Protein interactions for RNA: ENST00000428026.6

PTPRU-204, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 1 (best) BASIC

Gene PTPRU, Length 5,550 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-204ENST00000428026 KLHL26Q53HC5 615 aa14.1□□□□□ -0.15
PTPRU-204ENST00000428026 PRPF38BQ5VTL8 546 aaKnown RBP14.1□□□□□ -0.15
PTPRU-204ENST00000428026 CHERPQ8IWX8 916 aaKnown RBP14.1□□□□□ -0.15
PTPRU-204ENST00000428026 ZNF676Q8N7Q3 588 aa14.1□□□□□ -0.15
PTPRU-204ENST00000428026 COX18Q8N8Q8 333 aa14.1□□□□□ -0.15
PTPRU-204ENST00000428026 PHC3Q8NDX5 983 aa14.1□□□□□ -0.15
PTPRU-204ENST00000428026 CNIH3Q8TBE1 160 aa14.1□□□□□ -0.15
PTPRU-204ENST00000428026 PYURFQ96I23 114 aa14.1□□□□□ -0.15
PTPRU-204ENST00000428026 RIPOR3Q96MK2 946 aa14.1□□□□□ -0.15
PTPRU-204ENST00000428026 ACBD6Q9BR61 282 aa14.1□□□□□ -0.15
PTPRU-204ENST00000428026 TBCCD1Q9NVR7 557 aa14.1□□□□□ -0.15
PTPRU-204ENST00000428026 DNAJC27Q9NZQ0 273 aa14.1□□□□□ -0.15
PTPRU-204ENST00000428026 CALML5Q9NZT1 146 aa14.1□□□□□ -0.15
PTPRU-204ENST00000428026 TNFRSF10DQ9UBN6 386 aa14.1□□□□□ -0.15
PTPRU-204ENST00000428026 ELOA3DA6NLF2 546 aaPredicted RBP14.1□□□□□ -0.15
PTPRU-204ENST00000428026 MEN1O00255 615 aa14.1□□□□□ -0.15
PTPRU-204ENST00000428026 CDC7O00311 574 aa14.1□□□□□ -0.15
PTPRU-204ENST00000428026 CREG1O75629 220 aa14.1□□□□□ -0.15
PTPRU-204ENST00000428026 RLN2P04090 185 aa14.1□□□□□ -0.15
PTPRU-204ENST00000428026 GNAZP19086 355 aa14.1□□□□□ -0.15
PTPRU-204ENST00000428026 EDNRAP25101 427 aa14.1□□□□□ -0.15
PTPRU-204ENST00000428026 PSMD8P48556 350 aa14.1□□□□□ -0.15
PTPRU-204ENST00000428026 ELOA3BQ3SY89 546 aa14.1□□□□□ -0.15
PTPRU-204ENST00000428026 ZC3HC1Q86WB0 502 aaKnown RBP14.1□□□□□ -0.15
PTPRU-204ENST00000428026 SDR16C5Q8N3Y7 309 aa14.1□□□□□ -0.15
PTPRU-204ENST00000428026 BEND7Q8N7W2 519 aaPredicted RBP14.1□□□□□ -0.15
PTPRU-204ENST00000428026 ASCC1Q8N9N2 400 aaKnown RBP14.1□□□□□ -0.15
PTPRU-204ENST00000428026 ELOA3Q8NG57 546 aa14.1□□□□□ -0.15
PTPRU-204ENST00000428026 GRHL3Q8TE85 626 aa14.1□□□□□ -0.15
PTPRU-204ENST00000428026 HSH2DQ96JZ2 352 aa14.1□□□□□ -0.15
PTPRU-204ENST00000428026 GAL3ST4Q96RP7 486 aa14.1□□□□□ -0.15
PTPRU-204ENST00000428026 TMEM9Q9P0T7 183 aa14.1□□□□□ -0.15
PTPRU-204ENST00000428026 TBC1D14Q9P2M4 693 aa14.1□□□□□ -0.15
PTPRU-204ENST00000428026 FGF19O95750 216 aa14.1□□□□□ -0.15
PTPRU-204ENST00000428026 ALAS2P22557 587 aa14.1□□□□□ -0.15
PTPRU-204ENST00000428026 NKX2-5P52952 324 aaPredicted RBP14.1□□□□□ -0.15
PTPRU-204ENST00000428026 SCAMP5Q8TAC9 235 aa14.1□□□□□ -0.15
PTPRU-204ENST00000428026 AIFM2Q9BRQ8 373 aa14.1□□□□□ -0.15
PTPRU-204ENST00000428026 ZCCHC3Q9NUD5 404 aaKnown RBP14.1□□□□□ -0.15
PTPRU-204ENST00000428026 NUDT15Q9NV35 164 aa14.1□□□□□ -0.15
PTPRU-204ENST00000428026 CLDND1Q9NY35 253 aa14.1□□□□□ -0.15
PTPRU-204ENST00000428026 DEC1Q9P2X7 70 aa14.1□□□□□ -0.15
PTPRU-204ENST00000428026 RHCGQ9UBD6 479 aa14.1□□□□□ -0.15
PTPRU-204ENST00000428026 PTBP2Q9UKA9 531 aaKnown RBP14.1□□□□□ -0.15
PTPRU-204ENST00000428026 SCGB1D2O95969 90 aa14.1□□□□□ -0.15
PTPRU-204ENST00000428026 F2P00734 622 aa14.1□□□□□ -0.15
PTPRU-204ENST00000428026 BCHEP06276 602 aa14.1□□□□□ -0.15
PTPRU-204ENST00000428026 PEPDP12955 493 aa14.1□□□□□ -0.15
PTPRU-204ENST00000428026 PTPN2P17706 415 aa14.1□□□□□ -0.15
PTPRU-204ENST00000428026 PRPS1L1P21108 318 aa14.1□□□□□ -0.15
PTPRU-204ENST00000428026 GRK6P43250 576 aa14.1□□□□□ -0.15
PTPRU-204ENST00000428026 PPP1R3AQ16821 1122 aa14.1□□□□□ -0.15
PTPRU-204ENST00000428026 CHST9Q7L1S5 443 aa14.1□□□□□ -0.15
PTPRU-204ENST00000428026 LNX2Q8N448 690 aa14.1□□□□□ -0.15
PTPRU-204ENST00000428026 SRFBP1Q8NEF9 429 aaKnown RBP14.1□□□□□ -0.15
PTPRU-204ENST00000428026 COQ8AQ8NI60 647 aa14.1□□□□□ -0.15
PTPRU-204ENST00000428026 FCRL5Q96RD9 977 aa14.1□□□□□ -0.15
PTPRU-204ENST00000428026 MAGEH1Q9H213 219 aa14.1□□□□□ -0.15
PTPRU-204ENST00000428026 DSTNP60981 165 aa14.09□□□□□ -0.15
PTPRU-204ENST00000428026 OGDHQ02218 1023 aa14.09□□□□□ -0.15
PTPRU-204ENST00000428026 ATXN7L3Q14CW9 347 aaPredicted RBP14.09□□□□□ -0.15
PTPRU-204ENST00000428026 DPY19L1Q2PZI1 675 aa14.09□□□□□ -0.15
PTPRU-204ENST00000428026 TIGD5Q53EQ6 642 aa14.09□□□□□ -0.15
PTPRU-204ENST00000428026 NXPE1Q8N323 547 aa14.09□□□□□ -0.15
PTPRU-204ENST00000428026 NFKBIDQ8NI38 313 aa14.09□□□□□ -0.15
PTPRU-204ENST00000428026 ZBED6CLQ96FA7 236 aaPredicted RBP14.09□□□□□ -0.15
PTPRU-204ENST00000428026 ZIM2Q9NZV7 527 aa14.09□□□□□ -0.15
PTPRU-204ENST00000428026 J3QLW9 94 aa14.09□□□□□ -0.15
PTPRU-204ENST00000428026 ENTPD6O75354 484 aa14.09□□□□□ -0.15
PTPRU-204ENST00000428026 ZNF19P17023 458 aa14.09□□□□□ -0.15
PTPRU-204ENST00000428026 IDSP22304 550 aa14.09□□□□□ -0.15
PTPRU-204ENST00000428026 GDF5P43026 501 aa14.09□□□□□ -0.15
PTPRU-204ENST00000428026 PRKCDQ05655 676 aa14.09□□□□□ -0.15
PTPRU-204ENST00000428026 MINDY4Q4G0A6 757 aa14.09□□□□□ -0.15
PTPRU-204ENST00000428026 UBXN11Q5T124 520 aa14.09□□□□□ -0.15
PTPRU-204ENST00000428026 PAQR7Q86WK9 346 aa14.09□□□□□ -0.15
PTPRU-204ENST00000428026 ARL14EPQ8N8R7 260 aaPredicted RBP14.09□□□□□ -0.15
PTPRU-204ENST00000428026 CMASQ8NFW8 434 aaPredicted RBP14.09□□□□□ -0.15
PTPRU-204ENST00000428026 GPR151Q8TDV0 419 aa14.09□□□□□ -0.15
PTPRU-204ENST00000428026 MCCC1Q96RQ3 725 aaPredicted RBP14.09□□□□□ -0.15
PTPRU-204ENST00000428026 METTL8Q9H825 291 aaKnown RBP14.09□□□□□ -0.15
PTPRU-204ENST00000428026 FARSBQ9NSD9 589 aaKnown RBP14.09□□□□□ -0.15
PTPRU-204ENST00000428026 NID2Q14112 1375 aa14.09□□□□□ -0.15
PTPRU-204ENST00000428026 A0A1B0GVM2 712 aa14.09□□□□□ -0.15
PTPRU-204ENST00000428026 VAMP1P23763 118 aa14.09□□□□□ -0.15
PTPRU-204ENST00000428026 HTR7P34969 479 aa14.09□□□□□ -0.15
PTPRU-204ENST00000428026 NSG1P42857 185 aa14.09□□□□□ -0.15
PTPRU-204ENST00000428026 ACADVLP49748 655 aa14.09□□□□□ -0.15
PTPRU-204ENST00000428026 SULT2A1Q06520 285 aa14.09□□□□□ -0.15
PTPRU-204ENST00000428026 HNRNPA0Q13151 305 aaKnown RBP14.09□□□□□ -0.15
PTPRU-204ENST00000428026 DNAJB8Q8NHS0 232 aa14.09□□□□□ -0.15
PTPRU-204ENST00000428026 ZNF717Q9BY31 904 aaPredicted RBP14.09□□□□□ -0.15
PTPRU-204ENST00000428026 ADAP2Q9NPF8 381 aa14.09□□□□□ -0.15
PTPRU-204ENST00000428026 PHPT1Q9NRX4 125 aaPredicted RBP14.09□□□□□ -0.15
PTPRU-204ENST00000428026 EBF1Q9UH73 591 aa14.09□□□□□ -0.15
PTPRU-204ENST00000428026 ZNF823P16415 610 aa14.09□□□□□ -0.15
PTPRU-204ENST00000428026 RBM34P42696 430 aaKnown RBP14.09□□□□□ -0.15
PTPRU-204ENST00000428026 S100A10P60903 97 aa14.09□□□□□ -0.15
PTPRU-204ENST00000428026 PLD6Q8N2A8 252 aaKnown RBP14.09□□□□□ -0.15
PTPRU-204ENST00000428026 CCDC107Q8WV48 283 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms