RNA–Protein interactions for RNA: ENST00000426059.1

FN1-208, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 2,388 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-208ENST00000426059 ROPN1LQ96C74 230 aa16.69■□□□□ 0.26
FN1-208ENST00000426059 CXorf40BQ96DE9 158 aa16.69■□□□□ 0.26
FN1-208ENST00000426059 SERPINI1Q99574 410 aa16.69■□□□□ 0.26
FN1-208ENST00000426059 PCDHAC1Q9H158 963 aa16.69■□□□□ 0.26
FN1-208ENST00000426059 BRF2Q9HAW0 419 aa16.69■□□□□ 0.26
FN1-208ENST00000426059 SPAG4Q9NPE6 437 aa16.69■□□□□ 0.26
FN1-208ENST00000426059 DMRT3Q9NQL9 472 aa16.69■□□□□ 0.26
FN1-208ENST00000426059 ASIC5Q9NY37 505 aa16.69■□□□□ 0.26
FN1-208ENST00000426059 LEF1Q9UJU2 399 aaPredicted RBP16.69■□□□□ 0.26
FN1-208ENST00000426059 PPT2Q9UMR5 302 aa16.69■□□□□ 0.26
FN1-208ENST00000426059 DGKBQ9Y6T7 804 aa16.69■□□□□ 0.26
FN1-208ENST00000426059 COLEC10Q9Y6Z7 277 aa16.69■□□□□ 0.26
FN1-208ENST00000426059 NUP214P35658 2090 aaPredicted RBP16.69■□□□□ 0.26
FN1-208ENST00000426059 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa16.69■□□□□ 0.26
FN1-208ENST00000426059 ZNF839A8K0R7 811 aa16.69■□□□□ 0.26
FN1-208ENST00000426059 METTL12A8MUP2 240 aa16.69■□□□□ 0.26
FN1-208ENST00000426059 STATHP02808 62 aa16.69■□□□□ 0.26
FN1-208ENST00000426059 BCKDHBP21953 392 aa16.69■□□□□ 0.26
FN1-208ENST00000426059 SOX11P35716 441 aa16.69■□□□□ 0.26
FN1-208ENST00000426059 IRX1P78414 480 aaPredicted RBP16.69■□□□□ 0.26
FN1-208ENST00000426059 RABL3Q5HYI8 236 aa16.69■□□□□ 0.26
FN1-208ENST00000426059 TSSK4Q6SA08 328 aa16.69■□□□□ 0.26
FN1-208ENST00000426059 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP16.69■□□□□ 0.26
FN1-208ENST00000426059 TMEFF1Q8IYR6 380 aa16.69■□□□□ 0.26
FN1-208ENST00000426059 REPS1Q96D71 796 aa16.69■□□□□ 0.26
FN1-208ENST00000426059 GPATCH1Q9BRR8 931 aaKnown RBP16.69■□□□□ 0.26
FN1-208ENST00000426059 CLMPQ9H6B4 373 aa16.69■□□□□ 0.26
FN1-208ENST00000426059 THEGQ9P2T0 379 aa16.69■□□□□ 0.26
FN1-208ENST00000426059 SPEGQ15772 3267 aa16.68■□□□□ 0.26
FN1-208ENST00000426059 MAP3K13O43283 966 aa16.68■□□□□ 0.26
FN1-208ENST00000426059 PSMG1O95456 288 aa16.68■□□□□ 0.26
FN1-208ENST00000426059 HOXB3P14651 431 aaPredicted RBP16.68■□□□□ 0.26
FN1-208ENST00000426059 ME2P23368 584 aa16.68■□□□□ 0.26
FN1-208ENST00000426059 PHC1P78364 1004 aa16.68■□□□□ 0.26
FN1-208ENST00000426059 RCN1Q15293 331 aa16.68■□□□□ 0.26
FN1-208ENST00000426059 CCDC6Q16204 474 aa16.68■□□□□ 0.26
FN1-208ENST00000426059 HACD2Q6Y1H2 254 aa16.68■□□□□ 0.26
FN1-208ENST00000426059 SYT12Q8IV01 421 aa16.68■□□□□ 0.26
FN1-208ENST00000426059 UBALD2Q8IYN6 164 aa16.68■□□□□ 0.26
FN1-208ENST00000426059 TSPEARQ8WU66 669 aa16.68■□□□□ 0.26
FN1-208ENST00000426059 LCN9Q8WX39 176 aa16.68■□□□□ 0.26
FN1-208ENST00000426059 STMN2Q93045 179 aa16.68■□□□□ 0.26
FN1-208ENST00000426059 TMEM74Q96NL1 305 aa16.68■□□□□ 0.26
FN1-208ENST00000426059 ZBTB18Q99592 522 aa16.68■□□□□ 0.26
FN1-208ENST00000426059 SORBS1Q9BX66 1292 aaKnown RBP16.68■□□□□ 0.26
FN1-208ENST00000426059 RNPEPL1Q9HAU8 725 aa16.68■□□□□ 0.26
FN1-208ENST00000426059 TAAR2Q9P1P5 351 aa16.68■□□□□ 0.26
FN1-208ENST00000426059 TMEM181Q9P2C4 612 aa16.68■□□□□ 0.26
FN1-208ENST00000426059 PCOLCE2Q9UKZ9 415 aa16.68■□□□□ 0.26
FN1-208ENST00000426059 NPIPB8E9PQR5 432 aa16.67■□□□□ 0.26
FN1-208ENST00000426059 NME4O00746 187 aa16.67■□□□□ 0.26
FN1-208ENST00000426059 MAP3K7O43318 606 aa16.67■□□□□ 0.26
FN1-208ENST00000426059 LCMT2O60294 686 aaKnown RBP16.67■□□□□ 0.26
FN1-208ENST00000426059 PGRP06401 933 aa16.67■□□□□ 0.26
FN1-208ENST00000426059 PRPS2P11908 318 aa16.67■□□□□ 0.26
FN1-208ENST00000426059 SLC6A2P23975 617 aa16.67■□□□□ 0.26
FN1-208ENST00000426059 CXCL12P48061 93 aa16.67■□□□□ 0.26
FN1-208ENST00000426059 CLDN8P56748 225 aa16.67■□□□□ 0.26
FN1-208ENST00000426059 PRDX1Q06830 199 aaKnown RBP16.67■□□□□ 0.26
FN1-208ENST00000426059 PGS1Q32NB8 556 aa16.67■□□□□ 0.26
FN1-208ENST00000426059 PRRT3Q5FWE3 981 aa16.67■□□□□ 0.26
FN1-208ENST00000426059 ANKRD26P1Q6NSI1 321 aa16.67■□□□□ 0.26
FN1-208ENST00000426059 DNAJC14Q6Y2X3 702 aaPredicted RBP16.67■□□□□ 0.26
FN1-208ENST00000426059 ARMCX6Q7L4S7 300 aa16.67■□□□□ 0.26
FN1-208ENST00000426059 TAF8Q7Z7C8 310 aa16.67■□□□□ 0.26
FN1-208ENST00000426059 KIAA2013Q8IYS2 634 aa16.67■□□□□ 0.26
FN1-208ENST00000426059 FBXL6Q8N531 539 aa16.67■□□□□ 0.26
FN1-208ENST00000426059 CHTF18Q8WVB6 975 aa16.67■□□□□ 0.26
FN1-208ENST00000426059 PYDC1Q8WXC3 89 aa16.67■□□□□ 0.26
FN1-208ENST00000426059 C11orf24Q96F05 449 aaPredicted RBP16.67■□□□□ 0.26
FN1-208ENST00000426059 PPM1MQ96MI6 270 aa16.67■□□□□ 0.26
FN1-208ENST00000426059 HSPA12BQ96MM6 686 aa16.67■□□□□ 0.26
FN1-208ENST00000426059 TMED5Q9Y3A6 229 aa16.67■□□□□ 0.26
FN1-208ENST00000426059 HEBP2Q9Y5Z4 205 aa16.67■□□□□ 0.26
FN1-208ENST00000426059 SPAG17Q6Q759 2223 aa16.67■□□□□ 0.26
FN1-208ENST00000426059 TBX6O95947 436 aaPredicted RBP16.67■□□□□ 0.26
FN1-208ENST00000426059 HSD3B1P14060 373 aa16.67■□□□□ 0.26
FN1-208ENST00000426059 CTSEP14091 401 aa16.67■□□□□ 0.26
FN1-208ENST00000426059 HSD3B2P26439 372 aa16.67■□□□□ 0.26
FN1-208ENST00000426059 CCR8P51685 355 aa16.67■□□□□ 0.26
FN1-208ENST00000426059 SESN3P58005 492 aa16.67■□□□□ 0.26
FN1-208ENST00000426059 ZNF33BQ06732 778 aa16.67■□□□□ 0.26
FN1-208ENST00000426059 LAPTM5Q13571 262 aa16.67■□□□□ 0.26
FN1-208ENST00000426059 WASH2PQ6VEQ5 465 aa16.67■□□□□ 0.26
FN1-208ENST00000426059 ANKRD46Q86W74 232 aa16.67■□□□□ 0.26
FN1-208ENST00000426059 AMIGO1Q86WK6 493 aa16.67■□□□□ 0.26
FN1-208ENST00000426059 HOMEZQ8IX15 550 aa16.67■□□□□ 0.26
FN1-208ENST00000426059 SLC15A3Q8IY34 581 aa16.67■□□□□ 0.26
FN1-208ENST00000426059 KRT78Q8N1N4 520 aa16.67■□□□□ 0.26
FN1-208ENST00000426059 ABHD11Q8NFV4 315 aa16.67■□□□□ 0.26
FN1-208ENST00000426059 WDR48Q8TAF3 677 aa16.67■□□□□ 0.26
FN1-208ENST00000426059 GPBAR1Q8TDU6 330 aa16.67■□□□□ 0.26
FN1-208ENST00000426059 SLC26A7Q8TE54 656 aa16.67■□□□□ 0.26
FN1-208ENST00000426059 KIR3DX1Q9H7L2 352 aa16.67■□□□□ 0.26
FN1-208ENST00000426059 WASH6PQ9NQA3 447 aa16.67■□□□□ 0.26
FN1-208ENST00000426059 GPR27Q9NS67 375 aa16.67■□□□□ 0.26
FN1-208ENST00000426059 GID8Q9NWU2 228 aa16.67■□□□□ 0.26
FN1-208ENST00000426059 CMTM6Q9NX76 183 aa16.67■□□□□ 0.26
FN1-208ENST00000426059 PCDHB11Q9Y5F2 797 aa16.67■□□□□ 0.26
FN1-208ENST00000426059 WDFY4Q6ZS81 3184 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms