RNA–Protein interactions for RNA: ENST00000424443.7

TSPAN3-203, Transcript of tetraspanin 3, humanhuman

TSL 2 BASIC

Gene TSPAN3, Length 1,530 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-203ENST00000424443 C4orf33Q8N1A6 199 aa24.3■■□□□ 1.48
TSPAN3-203ENST00000424443 MYRIPQ8NFW9 859 aa24.3■■□□□ 1.48
TSPAN3-203ENST00000424443 THAP11Q96EK4 314 aa24.3■■□□□ 1.48
TSPAN3-203ENST00000424443 ZIM3Q96PE6 472 aa24.3■■□□□ 1.48
TSPAN3-203ENST00000424443 OR2A5Q96R48 311 aa24.3■■□□□ 1.48
TSPAN3-203ENST00000424443 NLNQ9BYT8 704 aa24.3■■□□□ 1.48
TSPAN3-203ENST00000424443 IQCGQ9H095 443 aaKnown RBP24.3■■□□□ 1.48
TSPAN3-203ENST00000424443 STARD5Q9NSY2 213 aa24.3■■□□□ 1.48
TSPAN3-203ENST00000424443 ZMIZ1Q9ULJ6 1067 aa24.3■■□□□ 1.48
TSPAN3-203ENST00000424443 ACACBO00763 2458 aa24.3■■□□□ 1.48
TSPAN3-203ENST00000424443 ACACAQ13085 2346 aa24.29■■□□□ 1.48
TSPAN3-203ENST00000424443 TAF4O00268 1085 aa24.29■■□□□ 1.48
TSPAN3-203ENST00000424443 TXNDC9O14530 226 aa24.29■■□□□ 1.48
TSPAN3-203ENST00000424443 RGS16O15492 202 aaPredicted RBP24.29■■□□□ 1.48
TSPAN3-203ENST00000424443 CTSBP07858 339 aa24.29■■□□□ 1.48
TSPAN3-203ENST00000424443 C1GALT1C1LP0DN25 315 aa24.29■■□□□ 1.48
TSPAN3-203ENST00000424443 EPB42P16452 691 aa24.29■■□□□ 1.48
TSPAN3-203ENST00000424443 CXCR2P25025 360 aa24.29■■□□□ 1.48
TSPAN3-203ENST00000424443 CLN3Q13286 438 aa24.29■■□□□ 1.48
TSPAN3-203ENST00000424443 TGIF1Q15583 401 aa24.29■■□□□ 1.48
TSPAN3-203ENST00000424443 FAM214AQ32MH5 1076 aa24.29■■□□□ 1.48
TSPAN3-203ENST00000424443 CEP85LQ5SZL2 805 aa24.29■■□□□ 1.48
TSPAN3-203ENST00000424443 TIPARPQ7Z3E1 657 aaKnown RBP24.29■■□□□ 1.48
TSPAN3-203ENST00000424443 TRABD2AQ86V40 505 aa24.29■■□□□ 1.48
TSPAN3-203ENST00000424443 SRRM1Q8IYB3 904 aaKnown RBP24.29■■□□□ 1.48
TSPAN3-203ENST00000424443 IQCKQ8N0W5 287 aa24.29■■□□□ 1.48
TSPAN3-203ENST00000424443 OR4K1Q8NGD4 311 aa24.29■■□□□ 1.48
TSPAN3-203ENST00000424443 NKD1Q969G9 470 aa24.29■■□□□ 1.48
TSPAN3-203ENST00000424443 CENPHQ9H3R5 247 aa24.29■■□□□ 1.48
TSPAN3-203ENST00000424443 PADI1Q9ULC6 663 aa24.29■■□□□ 1.48
TSPAN3-203ENST00000424443 APC2O95996 2303 aa24.29■■□□□ 1.48
TSPAN3-203ENST00000424443 H3BMH7 237 aa24.28■■□□□ 1.48
TSPAN3-203ENST00000424443 OR1F1O43749 312 aa24.28■■□□□ 1.48
TSPAN3-203ENST00000424443 CRHR1P34998 444 aa24.28■■□□□ 1.48
TSPAN3-203ENST00000424443 PCBP2Q15366 365 aaKnown RBP eCLIP24.28■■□□□ 1.487e-7■■■■■ 27.7
TSPAN3-203ENST00000424443 YOD1Q5VVQ6 348 aaPredicted RBP24.28■■□□□ 1.48
TSPAN3-203ENST00000424443 BROXQ5VW32 411 aa24.28■■□□□ 1.48
TSPAN3-203ENST00000424443 LRIG3Q6UXM1 1119 aa24.28■■□□□ 1.48
TSPAN3-203ENST00000424443 TEX9Q8N6V9 391 aa24.28■■□□□ 1.48
TSPAN3-203ENST00000424443 CSNK1A1LQ8N752 337 aa24.28■■□□□ 1.48
TSPAN3-203ENST00000424443 ZNF285Q96NJ3 590 aa24.28■■□□□ 1.48
TSPAN3-203ENST00000424443 RUFY1Q96T51 708 aa24.28■■□□□ 1.48
TSPAN3-203ENST00000424443 ASB1Q9Y576 335 aa24.28■■□□□ 1.48
TSPAN3-203ENST00000424443 TPRP12270 2363 aaKnown RBP24.28■■□□□ 1.48
TSPAN3-203ENST00000424443 KCNE1BA0A087WTH5 132 aa24.27■■□□□ 1.48
TSPAN3-203ENST00000424443 TRBC2A0A5B9 178 aa24.27■■□□□ 1.48
TSPAN3-203ENST00000424443 STX16-NPEPL1H3BU86 382 aa24.27■■□□□ 1.48
TSPAN3-203ENST00000424443 STX16O14662 325 aa24.27■■□□□ 1.48
TSPAN3-203ENST00000424443 KATNA1O75449 491 aa24.27■■□□□ 1.48
TSPAN3-203ENST00000424443 ALAS2P22557 587 aa24.27■■□□□ 1.48
TSPAN3-203ENST00000424443 EEF1DP29692 281 aaKnown RBP24.27■■□□□ 1.48
TSPAN3-203ENST00000424443 PIK3CGP48736 1102 aa24.27■■□□□ 1.48
TSPAN3-203ENST00000424443 CCDC153Q494R4 210 aa24.27■■□□□ 1.48
TSPAN3-203ENST00000424443 XKR6Q5GH73 641 aa24.27■■□□□ 1.48
TSPAN3-203ENST00000424443 MANEAQ5SRI9 462 aa24.27■■□□□ 1.48
TSPAN3-203ENST00000424443 ATG9BQ674R7 924 aa24.27■■□□□ 1.48
TSPAN3-203ENST00000424443 METTL2BQ6P1Q9 378 aaKnown RBP24.27■■□□□ 1.48
TSPAN3-203ENST00000424443 SH2D5Q6ZV89 423 aa24.27■■□□□ 1.48
TSPAN3-203ENST00000424443 KRT78Q8N1N4 520 aa24.27■■□□□ 1.48
TSPAN3-203ENST00000424443 CCDC63Q8NA47 563 aa24.27■■□□□ 1.48
TSPAN3-203ENST00000424443 KIAA1143Q96AT1 154 aaPredicted RBP24.27■■□□□ 1.48
TSPAN3-203ENST00000424443 SMC6Q96SB8 1091 aa24.27■■□□□ 1.48
TSPAN3-203ENST00000424443 NDOR1Q9UHB4 597 aa24.27■■□□□ 1.48
TSPAN3-203ENST00000424443 SPTBP11277 2137 aa24.27■■□□□ 1.48
TSPAN3-203ENST00000424443 BCL6P41182 706 aa24.26■■□□□ 1.47
TSPAN3-203ENST00000424443 IRF8Q02556 426 aa24.26■■□□□ 1.47
TSPAN3-203ENST00000424443 SLC18A2Q05940 514 aa24.26■■□□□ 1.47
TSPAN3-203ENST00000424443 ABHD18Q0P651 414 aa24.26■■□□□ 1.47
TSPAN3-203ENST00000424443 RBBP5Q15291 538 aaKnown RBP24.26■■□□□ 1.47
TSPAN3-203ENST00000424443 RHBDD2Q6NTF9 364 aa24.26■■□□□ 1.47
TSPAN3-203ENST00000424443 SLCO4C1Q6ZQN7 724 aa24.26■■□□□ 1.47
TSPAN3-203ENST00000424443 TTLL10Q6ZVT0 673 aa24.26■■□□□ 1.47
TSPAN3-203ENST00000424443 SLC38A9Q8NBW4 561 aa24.26■■□□□ 1.47
TSPAN3-203ENST00000424443 MR1Q95460 341 aa24.26■■□□□ 1.47
TSPAN3-203ENST00000424443 LRFN5Q96NI6 719 aa24.26■■□□□ 1.47
TSPAN3-203ENST00000424443 EHD1Q9H4M9 534 aa24.26■■□□□ 1.47
TSPAN3-203ENST00000424443 LHX9Q9NQ69 397 aa24.26■■□□□ 1.47
TSPAN3-203ENST00000424443 CUTCQ9NTM9 273 aa24.26■■□□□ 1.47
TSPAN3-203ENST00000424443 DHCR7Q9UBM7 475 aaKnown RBP24.26■■□□□ 1.47
TSPAN3-203ENST00000424443 PCDHGA4Q9Y5G9 962 aa24.26■■□□□ 1.47
TSPAN3-203ENST00000424443 AHCTF1Q8WYP5 2266 aa24.26■■□□□ 1.47
TSPAN3-203ENST00000424443 HYKKA2RU49 373 aa24.25■■□□□ 1.47
TSPAN3-203ENST00000424443 MEN1O00255 615 aa24.25■■□□□ 1.47
TSPAN3-203ENST00000424443 LCMT2O60294 686 aaKnown RBP24.25■■□□□ 1.47
TSPAN3-203ENST00000424443 SIX3O95343 332 aaPredicted RBP24.25■■□□□ 1.47
TSPAN3-203ENST00000424443 AGXTP21549 392 aa24.25■■□□□ 1.47
TSPAN3-203ENST00000424443 VARSP26640 1264 aaKnown RBP24.25■■□□□ 1.47
TSPAN3-203ENST00000424443 REEP5Q00765 189 aa24.25■■□□□ 1.47
TSPAN3-203ENST00000424443 GPS2Q13227 327 aa24.25■■□□□ 1.47
TSPAN3-203ENST00000424443 HIST2H2ACQ16777 129 aaPredicted RBP24.25■■□□□ 1.47
TSPAN3-203ENST00000424443 ST3GAL2Q16842 350 aa24.25■■□□□ 1.47
TSPAN3-203ENST00000424443 HIST2H2AA3Q6FI13 130 aa24.25■■□□□ 1.47
TSPAN3-203ENST00000424443 SPACA3Q8IXA5 215 aa24.25■■□□□ 1.47
TSPAN3-203ENST00000424443 DSELQ8IZU8 1212 aa24.25■■□□□ 1.47
TSPAN3-203ENST00000424443 TMEM151AQ8N4L1 468 aa24.25■■□□□ 1.47
TSPAN3-203ENST00000424443 MFSD9Q8NBP5 474 aa24.25■■□□□ 1.47
TSPAN3-203ENST00000424443 CAMKVQ8NCB2 501 aa24.25■■□□□ 1.47
TSPAN3-203ENST00000424443 PTCD3Q96EY7 689 aaKnown RBP24.25■■□□□ 1.47
TSPAN3-203ENST00000424443 SARGQ9BW04 601 aa24.25■■□□□ 1.47
TSPAN3-203ENST00000424443 PRM3Q9NNZ6 103 aa24.25■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms