RNA–Protein interactions for RNA: ENST00000423982.6

MSH5-206, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 2,706 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-206ENST00000423982 OR4F3Q6IEY1 312 aa13.9□□□□□ -0.18
MSH5-206ENST00000423982 FAM151BQ6UXP7 276 aa13.9□□□□□ -0.18
MSH5-206ENST00000423982 OR52E4Q8NGH9 312 aa13.9□□□□□ -0.18
MSH5-206ENST00000423982 SLC38A4Q969I6 547 aa13.9□□□□□ -0.18
MSH5-206ENST00000423982 ITPAQ9BY32 194 aa13.9□□□□□ -0.18
MSH5-206ENST00000423982 P2RY12Q9H244 342 aa13.9□□□□□ -0.18
MSH5-206ENST00000423982 NEK6Q9HC98 313 aa13.9□□□□□ -0.18
MSH5-206ENST00000423982 IL1RAPQ9NPH3 570 aa13.9□□□□□ -0.18
MSH5-206ENST00000423982 C14orf119Q9NWQ9 140 aa13.9□□□□□ -0.18
MSH5-206ENST00000423982 TAS2R16Q9NYV7 291 aa13.9□□□□□ -0.18
MSH5-206ENST00000423982 TNPO3Q9Y5L0 923 aaKnown RBP13.9□□□□□ -0.18
MSH5-206ENST00000423982 A8MV72 311 aaPredicted RBP13.89□□□□□ -0.19
MSH5-206ENST00000423982 MANBAO00462 879 aa13.89□□□□□ -0.19
MSH5-206ENST00000423982 AP3D1O14617 1153 aa13.89□□□□□ -0.19
MSH5-206ENST00000423982 CCL16O15467 120 aa13.89□□□□□ -0.19
MSH5-206ENST00000423982 LILRB3O75022 631 aa13.89□□□□□ -0.19
MSH5-206ENST00000423982 FKBP9O95302 570 aa13.89□□□□□ -0.19
MSH5-206ENST00000423982 C8AP07357 584 aa13.89□□□□□ -0.19
MSH5-206ENST00000423982 S100A3P33764 101 aa13.89□□□□□ -0.19
MSH5-206ENST00000423982 RPS14P62263 151 aaKnown RBP13.89□□□□□ -0.19
MSH5-206ENST00000423982 KIAA1614Q5VZ46 1190 aa13.89□□□□□ -0.19
MSH5-206ENST00000423982 PTRHD1Q6GMV3 140 aaKnown RBP13.89□□□□□ -0.19
MSH5-206ENST00000423982 PDE12Q6L8Q7 609 aaKnown RBP13.89□□□□□ -0.19
MSH5-206ENST00000423982 FKBP9P1Q75LS8 142 aa13.89□□□□□ -0.19
MSH5-206ENST00000423982 ADAMTSL2Q86TH1 951 aa13.89□□□□□ -0.19
MSH5-206ENST00000423982 HORMAD1Q86X24 394 aa13.89□□□□□ -0.19
MSH5-206ENST00000423982 SIGLEC11Q96RL6 698 aa13.89□□□□□ -0.19
MSH5-206ENST00000423982 COPS4Q9BT78 406 aa13.89□□□□□ -0.19
MSH5-206ENST00000423982 CENPOQ9BU64 300 aa13.89□□□□□ -0.19
MSH5-206ENST00000423982 PARVBQ9HBI1 364 aa13.89□□□□□ -0.19
MSH5-206ENST00000423982 AASDHPPTQ9NRN7 309 aa13.89□□□□□ -0.19
MSH5-206ENST00000423982 SNX6Q9UNH7 406 aa13.89□□□□□ -0.19
MSH5-206ENST00000423982 TMEM98Q9Y2Y6 226 aa13.89□□□□□ -0.19
MSH5-206ENST00000423982 C2orf78A6NCI8 922 aa13.89□□□□□ -0.19
MSH5-206ENST00000423982 PDYNP01213 254 aa13.89□□□□□ -0.19
MSH5-206ENST00000423982 ESR1P03372 595 aa13.89□□□□□ -0.19
MSH5-206ENST00000423982 CR2P20023 1033 aa13.89□□□□□ -0.19
MSH5-206ENST00000423982 AQP1P29972 269 aa13.89□□□□□ -0.19
MSH5-206ENST00000423982 CXCR4P61073 352 aa13.89□□□□□ -0.19
MSH5-206ENST00000423982 PPP2R2DQ66LE6 453 aa13.89□□□□□ -0.19
MSH5-206ENST00000423982 ALG1LQ6GMV1 187 aa13.89□□□□□ -0.19
MSH5-206ENST00000423982 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.89□□□□□ -0.19
MSH5-206ENST00000423982 DNAJB7Q7Z6W7 309 aaPredicted RBP13.89□□□□□ -0.19
MSH5-206ENST00000423982 LACC1Q8IV20 430 aa13.89□□□□□ -0.19
MSH5-206ENST00000423982 KIAA1958Q8N8K9 716 aa13.89□□□□□ -0.19
MSH5-206ENST00000423982 ULK4Q96C45 1275 aa13.89□□□□□ -0.19
MSH5-206ENST00000423982 TPD52L3Q96J77 140 aa13.89□□□□□ -0.19
MSH5-206ENST00000423982 EMILIN2Q9BXX0 1053 aa13.89□□□□□ -0.19
MSH5-206ENST00000423982 TLR8Q9NR97 1041 aaKnown RBP13.89□□□□□ -0.19
MSH5-206ENST00000423982 TMEM184CQ9NVA4 438 aa13.89□□□□□ -0.19
MSH5-206ENST00000423982 HCFC1R1Q9NWW0 138 aa13.89□□□□□ -0.19
MSH5-206ENST00000423982 CLDN24A6NM45 220 aa13.88□□□□□ -0.19
MSH5-206ENST00000423982 A8MX80 341 aa13.88□□□□□ -0.19
MSH5-206ENST00000423982 ADH1AP07327 375 aa13.88□□□□□ -0.19
MSH5-206ENST00000423982 IRF1P10914 325 aa13.88□□□□□ -0.19
MSH5-206ENST00000423982 HMGA1P17096 107 aaKnown RBP13.88□□□□□ -0.19
MSH5-206ENST00000423982 TRPC1P48995 793 aa13.88□□□□□ -0.19
MSH5-206ENST00000423982 ARHGDIAP52565 204 aa13.88□□□□□ -0.19
MSH5-206ENST00000423982 SMARCB1Q12824 385 aa13.88□□□□□ -0.19
MSH5-206ENST00000423982 NPRL3Q12980 569 aa13.88□□□□□ -0.19
MSH5-206ENST00000423982 VEPH1Q14D04 833 aa13.88□□□□□ -0.19
MSH5-206ENST00000423982 TIGD6Q17RP2 521 aa13.88□□□□□ -0.19
MSH5-206ENST00000423982 RSBN1Q5VWQ0 802 aaPredicted RBP13.88□□□□□ -0.19
MSH5-206ENST00000423982 TPGS2Q68CL5 300 aa13.88□□□□□ -0.19
MSH5-206ENST00000423982 TSPYL5Q86VY4 417 aaPredicted RBP13.88□□□□□ -0.19
MSH5-206ENST00000423982 HS6ST3Q8IZP7 471 aa13.88□□□□□ -0.19
MSH5-206ENST00000423982 TMEM132CQ8N3T6 1108 aa13.88□□□□□ -0.19
MSH5-206ENST00000423982 MRPL43Q8N983 215 aaKnown RBP13.88□□□□□ -0.19
MSH5-206ENST00000423982 C2orf15Q8WU43 125 aaKnown RBP13.88□□□□□ -0.19
MSH5-206ENST00000423982 HSH2DQ96JZ2 352 aa13.88□□□□□ -0.19
MSH5-206ENST00000423982 EBPLQ9BY08 206 aa13.88□□□□□ -0.19
MSH5-206ENST00000423982 REXO4Q9GZR2 422 aaKnown RBP13.88□□□□□ -0.19
MSH5-206ENST00000423982 GABARAPL1Q9H0R8 117 aa13.88□□□□□ -0.19
MSH5-206ENST00000423982 KCNH6Q9H252 994 aa13.88□□□□□ -0.19
MSH5-206ENST00000423982 ZNF334Q9HCZ1 680 aaPredicted RBP13.88□□□□□ -0.19
MSH5-206ENST00000423982 TM9SF3Q9HD45 589 aa13.88□□□□□ -0.19
MSH5-206ENST00000423982 THUMPD1Q9NXG2 353 aaKnown RBP13.88□□□□□ -0.19
MSH5-206ENST00000423982 PCDHGA6Q9Y5G7 932 aa13.88□□□□□ -0.19
MSH5-206ENST00000423982 F5H5T6 163 aa13.88□□□□□ -0.19
MSH5-206ENST00000423982 NRG2O14511 850 aaPredicted RBP13.88□□□□□ -0.19
MSH5-206ENST00000423982 DYRK3O43781 588 aa13.88□□□□□ -0.19
MSH5-206ENST00000423982 FABP3P05413 133 aa13.88□□□□□ -0.19
MSH5-206ENST00000423982 EPCAMP16422 314 aa13.88□□□□□ -0.19
MSH5-206ENST00000423982 HOXB9P17482 250 aaPredicted RBP13.88□□□□□ -0.19
MSH5-206ENST00000423982 DNAJA1P31689 397 aaKnown RBP13.88□□□□□ -0.19
MSH5-206ENST00000423982 PTGER3P43115 390 aa13.88□□□□□ -0.19
MSH5-206ENST00000423982 PPP3CCP48454 512 aa13.88□□□□□ -0.19
MSH5-206ENST00000423982 SEMG2Q02383 582 aa13.88□□□□□ -0.19
MSH5-206ENST00000423982 FADDQ13158 208 aa13.88□□□□□ -0.19
MSH5-206ENST00000423982 CAMK2GQ13555 558 aaPredicted RBP13.88□□□□□ -0.19
MSH5-206ENST00000423982 SF1Q15637 639 aaKnown RBP13.88□□□□□ -0.19
MSH5-206ENST00000423982 LRIF1Q5T3J3 769 aa13.88□□□□□ -0.19
MSH5-206ENST00000423982 GLB1L3Q8NCI6 653 aaPredicted RBP13.88□□□□□ -0.19
MSH5-206ENST00000423982 KREMEN2Q8NCW0 462 aa13.88□□□□□ -0.19
MSH5-206ENST00000423982 OR6K2Q8NGY2 324 aa13.88□□□□□ -0.19
MSH5-206ENST00000423982 CHCHD6Q9BRQ6 235 aa13.88□□□□□ -0.19
MSH5-206ENST00000423982 CD244Q9BZW8 370 aa13.88□□□□□ -0.19
MSH5-206ENST00000423982 MMP27Q9H306 513 aa13.88□□□□□ -0.19
MSH5-206ENST00000423982 GPR83Q9NYM4 423 aa13.88□□□□□ -0.19
MSH5-206ENST00000423982 SLC6A14Q9UN76 642 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms