RNA–Protein interactions for RNA: ENST00000423485.5

TOP2A-201, Transcript of DNA topoisomerase II alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP2A, Length 5,758 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2A-201ENST00000423485 PDE9AO76083 593 aa3.43□□□□□ -1.86
TOP2A-201ENST00000423485 BAG2O95816 211 aa3.43□□□□□ -1.86
TOP2A-201ENST00000423485 APRTP07741 180 aa3.43□□□□□ -1.86
TOP2A-201ENST00000423485 APLNRP35414 380 aa3.43□□□□□ -1.86
TOP2A-201ENST00000423485 GNALP38405 381 aa3.43□□□□□ -1.86
TOP2A-201ENST00000423485 HSPA13P48723 471 aa3.43□□□□□ -1.86
TOP2A-201ENST00000423485 ZNF84P51523 738 aa3.43□□□□□ -1.86
TOP2A-201ENST00000423485 SESN3P58005 492 aa3.43□□□□□ -1.86
TOP2A-201ENST00000423485 SIRPAP78324 504 aa3.43□□□□□ -1.86
TOP2A-201ENST00000423485 PLIN5Q00G26 463 aa3.43□□□□□ -1.86
TOP2A-201ENST00000423485 KLF1Q13351 362 aaPredicted RBP3.43□□□□□ -1.86
TOP2A-201ENST00000423485 IL11RAQ14626 422 aa3.43□□□□□ -1.86
TOP2A-201ENST00000423485 MAN2A1Q16706 1144 aa3.43□□□□□ -1.86
TOP2A-201ENST00000423485 HKDC1Q2TB90 917 aa3.43□□□□□ -1.86
TOP2A-201ENST00000423485 BOLA3Q53S33 107 aa3.43□□□□□ -1.86
TOP2A-201ENST00000423485 ZBED8Q8IZ13 594 aa3.43□□□□□ -1.86
TOP2A-201ENST00000423485 GALNT16Q8N428 558 aa3.43□□□□□ -1.86
TOP2A-201ENST00000423485 POC5Q8NA72 575 aa3.43□□□□□ -1.86
TOP2A-201ENST00000423485 PROKR1Q8TCW9 393 aa3.43□□□□□ -1.86
TOP2A-201ENST00000423485 NELFBQ8WX92 580 aa3.43□□□□□ -1.86
TOP2A-201ENST00000423485 RAB1CQ92928 201 aa3.43□□□□□ -1.86
TOP2A-201ENST00000423485 DPH3Q96FX2 82 aa3.43□□□□□ -1.86
TOP2A-201ENST00000423485 PERPQ96FX8 193 aa3.43□□□□□ -1.86
TOP2A-201ENST00000423485 KCNK6Q9Y257 313 aa3.43□□□□□ -1.86
TOP2A-201ENST00000423485 LOC105369274A0A096LPK9 316 aa3.43□□□□□ -1.86
TOP2A-201ENST00000423485 PPEF2O14830 753 aa3.43□□□□□ -1.86
TOP2A-201ENST00000423485 SNPHO15079 494 aa3.43□□□□□ -1.86
TOP2A-201ENST00000423485 MGRN1O60291 552 aa3.43□□□□□ -1.86
TOP2A-201ENST00000423485 PCDHGA12O60330 932 aa3.43□□□□□ -1.86
TOP2A-201ENST00000423485 GSRP00390 522 aa3.43□□□□□ -1.86
TOP2A-201ENST00000423485 GOT2P00505 430 aaKnown RBP3.43□□□□□ -1.86
TOP2A-201ENST00000423485 FGRP09769 529 aa3.43□□□□□ -1.86
TOP2A-201ENST00000423485 ANKRD34CP0C6C1 535 aa3.43□□□□□ -1.86
TOP2A-201ENST00000423485 YBEYP58557 167 aaPredicted RBP3.43□□□□□ -1.86
TOP2A-201ENST00000423485 DLG4P78352 724 aa3.43□□□□□ -1.86
TOP2A-201ENST00000423485 BST1Q10588 318 aa3.43□□□□□ -1.86
TOP2A-201ENST00000423485 INPP5JQ15735 1006 aaPredicted RBP3.43□□□□□ -1.86
TOP2A-201ENST00000423485 TAZQ16635 292 aa3.43□□□□□ -1.86
TOP2A-201ENST00000423485 FAM166AQ6J272 317 aa3.43□□□□□ -1.86
TOP2A-201ENST00000423485 C22orf39Q6P5X5 142 aa3.43□□□□□ -1.86
TOP2A-201ENST00000423485 TMEM71Q6P5X7 295 aa3.43□□□□□ -1.86
TOP2A-201ENST00000423485 TMEM220Q6QAJ8 160 aa3.43□□□□□ -1.86
TOP2A-201ENST00000423485 TRAPPC11Q7Z392 1133 aa3.43□□□□□ -1.86
TOP2A-201ENST00000423485 MRPL41Q8IXM3 137 aaKnown RBP3.43□□□□□ -1.86
TOP2A-201ENST00000423485 OR4N4Q8N0Y3 316 aa3.43□□□□□ -1.86
TOP2A-201ENST00000423485 TRIML2Q8N7C3 387 aa3.43□□□□□ -1.86
TOP2A-201ENST00000423485 BOLLQ8N9W6 283 aaKnown RBP3.43□□□□□ -1.86
TOP2A-201ENST00000423485 TBC1D15Q8TC07 691 aa3.43□□□□□ -1.86
TOP2A-201ENST00000423485 C17orf50Q8WW18 174 aa3.43□□□□□ -1.86
TOP2A-201ENST00000423485 PIK3IP1Q96FE7 263 aa3.43□□□□□ -1.86
TOP2A-201ENST00000423485 DHTKD1Q96HY7 919 aaPredicted RBP3.43□□□□□ -1.86
TOP2A-201ENST00000423485 OLFM3Q96PB7 478 aa3.43□□□□□ -1.86
TOP2A-201ENST00000423485 EIF2B3Q9NR50 452 aaKnown RBP3.43□□□□□ -1.86
TOP2A-201ENST00000423485 PRTFDC1Q9NRG1 225 aa3.43□□□□□ -1.86
TOP2A-201ENST00000423485 PAPOLBQ9NRJ5 636 aaKnown RBP3.43□□□□□ -1.86
TOP2A-201ENST00000423485 TNFRSF19Q9NS68 423 aa3.43□□□□□ -1.86
TOP2A-201ENST00000423485 SPATA7Q9P0W8 599 aa3.43□□□□□ -1.86
TOP2A-201ENST00000423485 PRODH2Q9UF12 536 aa3.43□□□□□ -1.86
TOP2A-201ENST00000423485 A0A1B0GTQ1 180 aa3.43□□□□□ -1.86
TOP2A-201ENST00000423485 IGLON5A6NGN9 336 aa3.43□□□□□ -1.86
TOP2A-201ENST00000423485 ABCD4O14678 606 aa3.43□□□□□ -1.86
TOP2A-201ENST00000423485 KRT86O43790 486 aa3.43□□□□□ -1.86
TOP2A-201ENST00000423485 FKBP9O95302 570 aa3.43□□□□□ -1.86
TOP2A-201ENST00000423485 PAX7P23759 505 aa3.43□□□□□ -1.86
TOP2A-201ENST00000423485 HTR7P34969 479 aa3.43□□□□□ -1.86
TOP2A-201ENST00000423485 SSR2P43308 183 aa3.43□□□□□ -1.86
TOP2A-201ENST00000423485 USP46P62068 366 aa3.43□□□□□ -1.86
TOP2A-201ENST00000423485 CCL7P80098 99 aa3.43□□□□□ -1.86
TOP2A-201ENST00000423485 MRPS35P82673 323 aaKnown RBP3.43□□□□□ -1.86
TOP2A-201ENST00000423485 RUNX1T1Q06455 604 aa3.43□□□□□ -1.86
TOP2A-201ENST00000423485 EFTUD2Q15029 972 aaKnown RBP eCLIP3.43□□□□□ -1.861e-8■■■■■ 38.4
TOP2A-201ENST00000423485 PCOLCEQ15113 449 aa3.43□□□□□ -1.86
TOP2A-201ENST00000423485 MYLK3Q32MK0 819 aa3.43□□□□□ -1.86
TOP2A-201ENST00000423485 CRB2Q5IJ48 1285 aa3.43□□□□□ -1.86
TOP2A-201ENST00000423485 WDR59Q6PJI9 974 aa3.43□□□□□ -1.86
TOP2A-201ENST00000423485 TXNDC11Q6PKC3 985 aa3.43□□□□□ -1.86
TOP2A-201ENST00000423485 VHLLQ6RSH7 139 aa3.43□□□□□ -1.86
TOP2A-201ENST00000423485 TMPRSS7Q7RTY8 843 aa3.43□□□□□ -1.86
TOP2A-201ENST00000423485 VN1R5Q7Z5H4 357 aa3.43□□□□□ -1.86
TOP2A-201ENST00000423485 KRT77Q7Z794 578 aa3.43□□□□□ -1.86
TOP2A-201ENST00000423485 ZZZ3Q8IYH5 903 aa3.43□□□□□ -1.86
TOP2A-201ENST00000423485 GPR137CQ8N3F9 429 aa3.43□□□□□ -1.86
TOP2A-201ENST00000423485 TRPV1Q8NER1 839 aa3.43□□□□□ -1.86
TOP2A-201ENST00000423485 SHKBP1Q8TBC3 707 aa3.43□□□□□ -1.86
TOP2A-201ENST00000423485 TMEM234Q8WY98 164 aa3.43□□□□□ -1.86
TOP2A-201ENST00000423485 PTCD3Q96EY7 689 aaKnown RBP3.43□□□□□ -1.86
TOP2A-201ENST00000423485 APOPT1Q96IL0 206 aa3.43□□□□□ -1.86
TOP2A-201ENST00000423485 TEPSINQ96N21 525 aa3.43□□□□□ -1.86
TOP2A-201ENST00000423485 DOHHQ9BU89 302 aa3.43□□□□□ -1.86
TOP2A-201ENST00000423485 RBM24Q9BX46 236 aaKnown RBP3.43□□□□□ -1.86
TOP2A-201ENST00000423485 LZTFL1Q9NQ48 299 aa3.43□□□□□ -1.86
TOP2A-201ENST00000423485 PLEK2Q9NYT0 353 aa3.43□□□□□ -1.86
TOP2A-201ENST00000423485 KCNG2Q9UJ96 466 aa3.43□□□□□ -1.86
TOP2A-201ENST00000423485 B3GNT3Q9Y2A9 372 aa3.43□□□□□ -1.86
TOP2A-201ENST00000423485 ORC6Q9Y5N6 252 aa3.43□□□□□ -1.86
TOP2A-201ENST00000423485 KIAA0100Q14667 2235 aaKnown RBP3.43□□□□□ -1.86
TOP2A-201ENST00000423485 RP1P56715 2156 aa3.42□□□□□ -1.86
TOP2A-201ENST00000423485 LOC100289279A0A1B0GTE1 492 aa3.42□□□□□ -1.86
TOP2A-201ENST00000423485 IQCMA0A1B0GVH7 501 aa3.42□□□□□ -1.86
TOP2A-201ENST00000423485 FOXE1O00358 373 aaPredicted RBP3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms