RNA–Protein interactions for RNA: ENST00000420746.1

TRIM39-206, Transcript of tripartite motif containing 39, humanhuman

TSL 3

Gene TRIM39, Length 708 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-206ENST00000420746 NIPA2Q8N8Q9 360 aa8.42□□□□□ -1.06
TRIM39-206ENST00000420746 BLOC1S5Q8TDH9 187 aa8.42□□□□□ -1.06
TRIM39-206ENST00000420746 LRRN4Q8WUT4 740 aa8.42□□□□□ -1.06
TRIM39-206ENST00000420746 ISL2Q96A47 359 aa8.42□□□□□ -1.06
TRIM39-206ENST00000420746 SARAFQ96BY9 339 aa8.42□□□□□ -1.06
TRIM39-206ENST00000420746 FAF2Q96CS3 445 aa8.42□□□□□ -1.06
TRIM39-206ENST00000420746 RAB11FIP5Q9BXF6 653 aa8.42□□□□□ -1.06
TRIM39-206ENST00000420746 GLOD4Q9HC38 313 aa8.42□□□□□ -1.06
TRIM39-206ENST00000420746 MRPL47Q9HD33 250 aaKnown RBP8.42□□□□□ -1.06
TRIM39-206ENST00000420746 FAM153AQ9UHL3 310 aa8.42□□□□□ -1.06
TRIM39-206ENST00000420746 EIF3LQ9Y262 564 aaKnown RBP8.42□□□□□ -1.06
TRIM39-206ENST00000420746 SVEP1Q4LDE5 3571 aa8.41□□□□□ -1.06
TRIM39-206ENST00000420746 MGAM2Q2M2H8 2515 aa8.41□□□□□ -1.06
TRIM39-206ENST00000420746 A0A0A6YYK5 440 aaPredicted RBP8.41□□□□□ -1.06
TRIM39-206ENST00000420746 OR2A25A4D2G3 310 aa8.41□□□□□ -1.06
TRIM39-206ENST00000420746 H0YIG0 161 aa8.41□□□□□ -1.06
TRIM39-206ENST00000420746 PES1O00541 588 aaKnown RBP8.41□□□□□ -1.06
TRIM39-206ENST00000420746 TXNDC9O14530 226 aa8.41□□□□□ -1.06
TRIM39-206ENST00000420746 BUD23O43709 281 aaKnown RBP8.41□□□□□ -1.06
TRIM39-206ENST00000420746 VPS26AO75436 327 aa8.41□□□□□ -1.06
TRIM39-206ENST00000420746 TUBB4AP04350 444 aa8.41□□□□□ -1.06
TRIM39-206ENST00000420746 RPN2P04844 631 aa8.41□□□□□ -1.06
TRIM39-206ENST00000420746 HSP90AA1P07900 732 aaKnown RBP8.41□□□□□ -1.06
TRIM39-206ENST00000420746 ITGALP20701 1170 aa8.41□□□□□ -1.06
TRIM39-206ENST00000420746 PTPN3P26045 913 aa8.41□□□□□ -1.06
TRIM39-206ENST00000420746 CEACAM8P31997 349 aaPredicted RBP8.41□□□□□ -1.06
TRIM39-206ENST00000420746 CYLC1P35663 651 aaPredicted RBP8.41□□□□□ -1.06
TRIM39-206ENST00000420746 NR0B1P51843 470 aaKnown RBP8.41□□□□□ -1.06
TRIM39-206ENST00000420746 WNT3AP56704 352 aa8.41□□□□□ -1.06
TRIM39-206ENST00000420746 PPIAP62937 165 aaKnown RBP8.41□□□□□ -1.06
TRIM39-206ENST00000420746 XIAPP98170 497 aa8.41□□□□□ -1.06
TRIM39-206ENST00000420746 MPP1Q00013 466 aa8.41□□□□□ -1.06
TRIM39-206ENST00000420746 SLC10A2Q12908 348 aaPredicted RBP8.41□□□□□ -1.06
TRIM39-206ENST00000420746 TNK1Q13470 666 aa8.41□□□□□ -1.06
TRIM39-206ENST00000420746 TRIM14Q14142 442 aa8.41□□□□□ -1.06
TRIM39-206ENST00000420746 NOMO1Q15155 1222 aa8.41□□□□□ -1.06
TRIM39-206ENST00000420746 SLC1A5Q15758 541 aa8.41□□□□□ -1.06
TRIM39-206ENST00000420746 TPD52L1Q16890 204 aaPredicted RBP8.41□□□□□ -1.06
TRIM39-206ENST00000420746 GPR33Q49SQ1 333 aa8.41□□□□□ -1.06
TRIM39-206ENST00000420746 MINDY4Q4G0A6 757 aa8.41□□□□□ -1.06
TRIM39-206ENST00000420746 NDUFAF5Q5TEU4 345 aa8.41□□□□□ -1.06
TRIM39-206ENST00000420746 POMZP3Q6PJE2 187 aa8.41□□□□□ -1.06
TRIM39-206ENST00000420746 TRILQ7L0X0 811 aa8.41□□□□□ -1.06
TRIM39-206ENST00000420746 SNX20Q7Z614 316 aa8.41□□□□□ -1.06
TRIM39-206ENST00000420746 SPATA13Q96N96 652 aa8.41□□□□□ -1.06
TRIM39-206ENST00000420746 SYT11Q9BT88 431 aa8.41□□□□□ -1.06
TRIM39-206ENST00000420746 LRTM1Q9HBL6 345 aa8.41□□□□□ -1.06
TRIM39-206ENST00000420746 SPTLC3Q9NUV7 552 aa8.41□□□□□ -1.06
TRIM39-206ENST00000420746 ZDHHC3Q9NYG2 299 aa8.41□□□□□ -1.06
TRIM39-206ENST00000420746 STOX2Q9P2F5 926 aaPredicted RBP8.41□□□□□ -1.06
TRIM39-206ENST00000420746 FKBPLQ9UIM3 349 aa8.41□□□□□ -1.06
TRIM39-206ENST00000420746 ACAD8Q9UKU7 415 aa8.41□□□□□ -1.06
TRIM39-206ENST00000420746 RUVBL1Q9Y265 456 aaKnown RBP8.41□□□□□ -1.06
TRIM39-206ENST00000420746 MPDZO75970 2070 aa8.41□□□□□ -1.06
TRIM39-206ENST00000420746 TRBV5-4A0A0C4DH59 114 aa8.4□□□□□ -1.06
TRIM39-206ENST00000420746 SLC5A10A0PJK1 596 aa8.4□□□□□ -1.06
TRIM39-206ENST00000420746 SERINC4A6NH21 518 aa8.4□□□□□ -1.06
TRIM39-206ENST00000420746 C2orf81A6NN90 581 aa8.4□□□□□ -1.06
TRIM39-206ENST00000420746 A8MV72 311 aaPredicted RBP8.4□□□□□ -1.06
TRIM39-206ENST00000420746 ARHGEF33A8MVX0 844 aa8.4□□□□□ -1.06
TRIM39-206ENST00000420746 H0YGG7 62 aa8.4□□□□□ -1.06
TRIM39-206ENST00000420746 EPHB6O15197 1021 aa8.4□□□□□ -1.06
TRIM39-206ENST00000420746 GLSO94925 669 aaPredicted RBP8.4□□□□□ -1.06
TRIM39-206ENST00000420746 CCDC172P0C7W6 258 aa8.4□□□□□ -1.06
TRIM39-206ENST00000420746 NID1P14543 1247 aa8.4□□□□□ -1.06
TRIM39-206ENST00000420746 GPR85P60893 370 aa8.4□□□□□ -1.06
TRIM39-206ENST00000420746 ARF3P61204 181 aaPredicted RBP8.4□□□□□ -1.06
TRIM39-206ENST00000420746 PDK2Q15119 407 aa8.4□□□□□ -1.06
TRIM39-206ENST00000420746 TAF1AQ15573 450 aaPredicted RBP8.4□□□□□ -1.06
TRIM39-206ENST00000420746 SYT16Q17RD7 645 aa8.4□□□□□ -1.06
TRIM39-206ENST00000420746 PDLIM3Q53GG5 364 aaPredicted RBP8.4□□□□□ -1.06
TRIM39-206ENST00000420746 TEX44Q53QW1 395 aa8.4□□□□□ -1.06
TRIM39-206ENST00000420746 SFT2D3Q587I9 215 aa8.4□□□□□ -1.06
TRIM39-206ENST00000420746 C10orf62Q5T681 223 aaPredicted RBP8.4□□□□□ -1.06
TRIM39-206ENST00000420746 ERICH6BQ5W0A0 696 aa8.4□□□□□ -1.06
TRIM39-206ENST00000420746 LRRC8BQ6P9F7 803 aa8.4□□□□□ -1.06
TRIM39-206ENST00000420746 KIAA0408Q6ZU52 694 aa8.4□□□□□ -1.06
TRIM39-206ENST00000420746 SEM1Q6ZVN7 128 aa8.4□□□□□ -1.06
TRIM39-206ENST00000420746 DCUN1D3Q8IWE4 304 aa8.4□□□□□ -1.06
TRIM39-206ENST00000420746 SHISA5Q8N114 240 aa8.4□□□□□ -1.06
TRIM39-206ENST00000420746 CYP4Z2PQ8N1L4 340 aa8.4□□□□□ -1.06
TRIM39-206ENST00000420746 FBXW8Q8N3Y1 598 aa8.4□□□□□ -1.06
TRIM39-206ENST00000420746 CSNK1A1LQ8N752 337 aa8.4□□□□□ -1.06
TRIM39-206ENST00000420746 PQLC3Q8N755 202 aa8.4□□□□□ -1.06
TRIM39-206ENST00000420746 OR2L3Q8NG85 312 aa8.4□□□□□ -1.06
TRIM39-206ENST00000420746 OR4K2Q8NGD2 314 aa8.4□□□□□ -1.06
TRIM39-206ENST00000420746 HMGCLL1Q8TB92 370 aa8.4□□□□□ -1.06
TRIM39-206ENST00000420746 IGFBPL1Q8WX77 278 aa8.4□□□□□ -1.06
TRIM39-206ENST00000420746 NTNG2Q96CW9 530 aa8.4□□□□□ -1.06
TRIM39-206ENST00000420746 CEP41Q9BYV8 373 aa8.4□□□□□ -1.06
TRIM39-206ENST00000420746 TIMMDC1Q9NPL8 285 aa8.4□□□□□ -1.06
TRIM39-206ENST00000420746 YAE1D1Q9NRH1 226 aa8.4□□□□□ -1.06
TRIM39-206ENST00000420746 ZNF701Q9NV72 531 aaPredicted RBP8.4□□□□□ -1.06
TRIM39-206ENST00000420746 TMEM160Q9NX00 188 aa8.4□□□□□ -1.06
TRIM39-206ENST00000420746 JKAMPQ9P055 326 aa8.4□□□□□ -1.06
TRIM39-206ENST00000420746 ZDHHC9Q9Y397 364 aa8.4□□□□□ -1.06
TRIM39-206ENST00000420746 ZNF407Q9C0G0 2248 aa8.39□□□□□ -1.07
TRIM39-206ENST00000420746 A0A087X1B8 175 aa8.39□□□□□ -1.07
TRIM39-206ENST00000420746 A0A0A6YYC8 382 aaPredicted RBP8.39□□□□□ -1.07
TRIM39-206ENST00000420746 SH3D21A4FU49 640 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms