RNA–Protein interactions for RNA: ENST00000419470.6

SFTPA1-202, Transcript of surfactant protein A1, humanhuman

TSL 1 (best) BASIC

Gene SFTPA1, Length 2,210 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPA1-202ENST00000419470 XPAP23025 273 aaPredicted RBP12.89□□□□□ -0.35
SFTPA1-202ENST00000419470 TIE1P35590 1138 aa12.89□□□□□ -0.35
SFTPA1-202ENST00000419470 WASP42768 502 aa12.89□□□□□ -0.35
SFTPA1-202ENST00000419470 SPINT3P49223 89 aa12.89□□□□□ -0.35
SFTPA1-202ENST00000419470 SEC13P55735 322 aa12.89□□□□□ -0.35
SFTPA1-202ENST00000419470 NFATC2Q13469 925 aa12.89□□□□□ -0.35
SFTPA1-202ENST00000419470 CAMK2GQ13555 558 aaPredicted RBP12.89□□□□□ -0.35
SFTPA1-202ENST00000419470 ARHGEF7Q14155 803 aa12.89□□□□□ -0.35
SFTPA1-202ENST00000419470 PON2Q15165 354 aa12.89□□□□□ -0.35
SFTPA1-202ENST00000419470 UGT3A2Q3SY77 523 aa12.89□□□□□ -0.35
SFTPA1-202ENST00000419470 IER5LQ5T953 404 aa12.89□□□□□ -0.35
SFTPA1-202ENST00000419470 HECTD2Q5U5R9 776 aa12.89□□□□□ -0.35
SFTPA1-202ENST00000419470 DPPA4Q7L190 304 aa12.89□□□□□ -0.35
SFTPA1-202ENST00000419470 SNX20Q7Z614 316 aa12.89□□□□□ -0.35
SFTPA1-202ENST00000419470 STK32CQ86UX6 486 aa12.89□□□□□ -0.35
SFTPA1-202ENST00000419470 PROSER1Q86XN7 944 aa12.89□□□□□ -0.35
SFTPA1-202ENST00000419470 GRAMD2AQ8IUY3 354 aa12.89□□□□□ -0.35
SFTPA1-202ENST00000419470 ELMOD2Q8IZ81 293 aa12.89□□□□□ -0.35
SFTPA1-202ENST00000419470 MIER2Q8N344 545 aa12.89□□□□□ -0.35
SFTPA1-202ENST00000419470 DEFB123Q8N688 67 aa12.89□□□□□ -0.35
SFTPA1-202ENST00000419470 ZNF566Q969W8 418 aa12.89□□□□□ -0.35
SFTPA1-202ENST00000419470 BIRC7Q96CA5 298 aa12.89□□□□□ -0.35
SFTPA1-202ENST00000419470 RNF145Q96MT1 663 aa12.89□□□□□ -0.35
SFTPA1-202ENST00000419470 SEPHS2Q99611 448 aa12.89□□□□□ -0.35
SFTPA1-202ENST00000419470 TMEM246Q9BRR3 403 aa12.89□□□□□ -0.35
SFTPA1-202ENST00000419470 CCDC90BQ9GZT6 254 aa12.89□□□□□ -0.35
SFTPA1-202ENST00000419470 IRF2BPLQ9H1B7 796 aa12.89□□□□□ -0.35
SFTPA1-202ENST00000419470 DDX28Q9NUL7 540 aaKnown RBP12.89□□□□□ -0.35
SFTPA1-202ENST00000419470 STMN3Q9NZ72 180 aa12.89□□□□□ -0.35
SFTPA1-202ENST00000419470 CAMSAP3Q9P1Y5 1249 aaPredicted RBP12.89□□□□□ -0.35
SFTPA1-202ENST00000419470 VPS9D1Q9Y2B5 631 aa12.89□□□□□ -0.35
SFTPA1-202ENST00000419470 A0A087X1B8 175 aa12.89□□□□□ -0.35
SFTPA1-202ENST00000419470 TRBV5-4A0A0C4DH59 114 aa12.89□□□□□ -0.35
SFTPA1-202ENST00000419470 AGAP5A6NIR3 686 aa12.89□□□□□ -0.35
SFTPA1-202ENST00000419470 NARSO43776 548 aaKnown RBP12.89□□□□□ -0.35
SFTPA1-202ENST00000419470 NDUFS3O75489 264 aa12.89□□□□□ -0.35
SFTPA1-202ENST00000419470 TRIM16O95361 564 aa12.89□□□□□ -0.35
SFTPA1-202ENST00000419470 MATN4O95460 622 aa12.89□□□□□ -0.35
SFTPA1-202ENST00000419470 NCK1P16333 377 aa12.89□□□□□ -0.35
SFTPA1-202ENST00000419470 RRM2P31350 389 aa12.89□□□□□ -0.35
SFTPA1-202ENST00000419470 EEFSECP57772 596 aaKnown RBP12.89□□□□□ -0.35
SFTPA1-202ENST00000419470 LSM3P62310 102 aaKnown RBP12.89□□□□□ -0.35
SFTPA1-202ENST00000419470 RACK1P63244 317 aaKnown RBP12.89□□□□□ -0.35
SFTPA1-202ENST00000419470 LIPEQ05469 1076 aa12.89□□□□□ -0.35
SFTPA1-202ENST00000419470 ZNF460Q14592 562 aa12.89□□□□□ -0.35
SFTPA1-202ENST00000419470 CHRNA6Q15825 494 aa12.89□□□□□ -0.35
SFTPA1-202ENST00000419470 DUSP7Q16829 419 aa12.89□□□□□ -0.35
SFTPA1-202ENST00000419470 FAM83EQ2M2I3 478 aa12.89□□□□□ -0.35
SFTPA1-202ENST00000419470 ZDHHC20Q5W0Z9 365 aa12.89□□□□□ -0.35
SFTPA1-202ENST00000419470 LAIR2Q6ISS4 152 aa12.89□□□□□ -0.35
SFTPA1-202ENST00000419470 PTCRAQ6ISU1 281 aaPredicted RBP12.89□□□□□ -0.35
SFTPA1-202ENST00000419470 ERAP2Q6P179 960 aa12.89□□□□□ -0.35
SFTPA1-202ENST00000419470 PNCKQ6P2M8 343 aa12.89□□□□□ -0.35
SFTPA1-202ENST00000419470 NEK5Q6P3R8 708 aa12.89□□□□□ -0.35
SFTPA1-202ENST00000419470 CERS6Q6ZMG9 384 aa12.89□□□□□ -0.35
SFTPA1-202ENST00000419470 CYHR1Q6ZMK1 362 aa12.89□□□□□ -0.35
SFTPA1-202ENST00000419470 RFLNAQ6ZTI6 216 aa12.89□□□□□ -0.35
SFTPA1-202ENST00000419470 PLD3Q8IV08 490 aa12.89□□□□□ -0.35
SFTPA1-202ENST00000419470 GALNT12Q8IXK2 581 aa12.89□□□□□ -0.35
SFTPA1-202ENST00000419470 BEND7Q8N7W2 519 aaPredicted RBP12.89□□□□□ -0.35
SFTPA1-202ENST00000419470 PJA1Q8NG27 643 aa12.89□□□□□ -0.35
SFTPA1-202ENST00000419470 SDCCAG3Q96C92 435 aa12.89□□□□□ -0.35
SFTPA1-202ENST00000419470 C19orf60Q96EN9 201 aa12.89□□□□□ -0.35
SFTPA1-202ENST00000419470 PPP1R16AQ96I34 528 aa12.89□□□□□ -0.35
SFTPA1-202ENST00000419470 TRMOQ9BU70 441 aa12.89□□□□□ -0.35
SFTPA1-202ENST00000419470 ASB8Q9H765 288 aa12.89□□□□□ -0.35
SFTPA1-202ENST00000419470 TM9SF3Q9HD45 589 aa12.89□□□□□ -0.35
SFTPA1-202ENST00000419470 TRIOO75962 3097 aa12.88□□□□□ -0.35
SFTPA1-202ENST00000419470 AGAP14A8MT82 685 aa12.88□□□□□ -0.35
SFTPA1-202ENST00000419470 PTGES3LE9PB15 166 aa12.88□□□□□ -0.35
SFTPA1-202ENST00000419470 C1QTNF3-AMACRE9PGA6 284 aa12.88□□□□□ -0.35
SFTPA1-202ENST00000419470 KATNA1O75449 491 aa12.88□□□□□ -0.35
SFTPA1-202ENST00000419470 TPPPO94811 219 aa12.88□□□□□ -0.35
SFTPA1-202ENST00000419470 IPO13O94829 963 aaKnown RBP12.88□□□□□ -0.35
SFTPA1-202ENST00000419470 GLULP15104 373 aa12.88□□□□□ -0.35
SFTPA1-202ENST00000419470 ITGALP20701 1170 aa12.88□□□□□ -0.35
SFTPA1-202ENST00000419470 AGXTP21549 392 aa12.88□□□□□ -0.35
SFTPA1-202ENST00000419470 DRD1P21728 446 aa12.88□□□□□ -0.35
SFTPA1-202ENST00000419470 CA5AP35218 305 aa12.88□□□□□ -0.35
SFTPA1-202ENST00000419470 CDKN2DP55273 166 aa12.88□□□□□ -0.35
SFTPA1-202ENST00000419470 DEFA1P59665 94 aa12.88□□□□□ -0.35
SFTPA1-202ENST00000419470 DEFA3P59666 94 aa12.88□□□□□ -0.35
SFTPA1-202ENST00000419470 NCS1P62166 190 aa12.88□□□□□ -0.35
SFTPA1-202ENST00000419470 ZNF45Q02386 682 aa12.88□□□□□ -0.35
SFTPA1-202ENST00000419470 FXNQ16595 210 aa12.88□□□□□ -0.35
SFTPA1-202ENST00000419470 CDONQ4KMG0 1287 aa12.88□□□□□ -0.35
SFTPA1-202ENST00000419470 SNAP47Q5SQN1 464 aa12.88□□□□□ -0.35
SFTPA1-202ENST00000419470 SYT6Q5T7P8 510 aaPredicted RBP12.88□□□□□ -0.35
SFTPA1-202ENST00000419470 HSD11B1LQ7Z5J1 315 aa12.88□□□□□ -0.35
SFTPA1-202ENST00000419470 IFNEQ86WN2 208 aa12.88□□□□□ -0.35
SFTPA1-202ENST00000419470 ZDHHC13Q8IUH4 622 aa12.88□□□□□ -0.35
SFTPA1-202ENST00000419470 TSPAN17Q96FV3 270 aa12.88□□□□□ -0.35
SFTPA1-202ENST00000419470 MBOAT4Q96T53 435 aa12.88□□□□□ -0.35
SFTPA1-202ENST00000419470 AARSD1Q9BTE6 412 aaKnown RBP12.88□□□□□ -0.35
SFTPA1-202ENST00000419470 RSPH9Q9H1X1 276 aaPredicted RBP12.88□□□□□ -0.35
SFTPA1-202ENST00000419470 EPS8L2Q9H6S3 715 aa12.88□□□□□ -0.35
SFTPA1-202ENST00000419470 ATP6AP2A0A1C7CYW4 349 aa12.88□□□□□ -0.35
SFTPA1-202ENST00000419470 UBA6A0AVT1 1052 aaPredicted RBP12.88□□□□□ -0.35
SFTPA1-202ENST00000419470 PABPN1LA6NDY0 278 aaKnown RBP12.88□□□□□ -0.35
SFTPA1-202ENST00000419470 NEMP2A6NFY4 417 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms