RNA–Protein interactions for RNA: ENST00000418457.6

VPS41-206, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 532 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-206ENST00000418457 PCYOX1Q9UHG3 505 aa2.56□□□□□ -2
VPS41-206ENST00000418457 MAD2L2Q9UI95 211 aa2.56□□□□□ -2
VPS41-206ENST00000418457 POU2F3Q9UKI9 436 aa2.56□□□□□ -2
VPS41-206ENST00000418457 TRAF3IP3Q9Y228 551 aa2.56□□□□□ -2
VPS41-206ENST00000418457 OR2W1Q9Y3N9 320 aa2.56□□□□□ -2
VPS41-206ENST00000418457 LRRC42Q9Y546 428 aa2.56□□□□□ -2
VPS41-206ENST00000418457 PCDHAC2Q9Y5I4 1007 aa2.56□□□□□ -2
VPS41-206ENST00000418457 UBE4BO95155 1302 aa2.56□□□□□ -2
VPS41-206ENST00000418457 MROH7Q68CQ1 1323 aa2.56□□□□□ -2
VPS41-206ENST00000418457 FAM205AQ6ZU69 1335 aa2.56□□□□□ -2
VPS41-206ENST00000418457 PASKQ96RG2 1323 aa2.56□□□□□ -2
VPS41-206ENST00000418457 SLIT2O94813 1529 aa2.56□□□□□ -2
VPS41-206ENST00000418457 DDX60LQ5H9U9 1706 aaKnown RBP2.56□□□□□ -2
VPS41-206ENST00000418457 FOCADQ5VW36 1801 aa2.56□□□□□ -2
VPS41-206ENST00000418457 SLX4Q8IY92 1834 aa2.56□□□□□ -2
VPS41-206ENST00000418457 WNK3Q9BYP7 1800 aa2.56□□□□□ -2
VPS41-206ENST00000418457 A0A1W2PQ09 198 aa2.55□□□□□ -2
VPS41-206ENST00000418457 SMCO2A6NFE2 343 aa2.55□□□□□ -2
VPS41-206ENST00000418457 ENO4A6NNW6 628 aa2.55□□□□□ -2
VPS41-206ENST00000418457 PP2D1A8MPX8 630 aa2.55□□□□□ -2
VPS41-206ENST00000418457 PRSS47A8MTI9 375 aa2.55□□□□□ -2
VPS41-206ENST00000418457 TRAFD1O14545 582 aaPredicted RBP2.55□□□□□ -2
VPS41-206ENST00000418457 MAPK13O15264 365 aa2.55□□□□□ -2
VPS41-206ENST00000418457 EIF3DO15371 548 aaKnown RBP eCLIP2.55□□□□□ -2
VPS41-206ENST00000418457 P4HA2O15460 535 aa2.55□□□□□ -2
VPS41-206ENST00000418457 TTI1O43156 1089 aa2.55□□□□□ -2
VPS41-206ENST00000418457 ZNHIT1O43257 154 aa2.55□□□□□ -2
VPS41-206ENST00000418457 RIPK2O43353 540 aa2.55□□□□□ -2
VPS41-206ENST00000418457 PLPP2O43688 288 aa2.55□□□□□ -2
VPS41-206ENST00000418457 DIAPH2O60879 1101 aa2.55□□□□□ -2
VPS41-206ENST00000418457 MITFO75030 526 aaPredicted RBP2.55□□□□□ -2
VPS41-206ENST00000418457 WDR1O75083 606 aa2.55□□□□□ -2
VPS41-206ENST00000418457 SMIM24O75264 130 aa2.55□□□□□ -2
VPS41-206ENST00000418457 CDH16O75309 829 aa2.55□□□□□ -2
VPS41-206ENST00000418457 ZWINTO95229 277 aa2.55□□□□□ -2
VPS41-206ENST00000418457 GAS8O95995 478 aa2.55□□□□□ -2
VPS41-206ENST00000418457 FGGP02679 453 aa2.55□□□□□ -2
VPS41-206ENST00000418457 LDHCP07864 332 aa2.55□□□□□ -2
VPS41-206ENST00000418457 FAM106CPP0CH98 169 aa2.55□□□□□ -2
VPS41-206ENST00000418457 TSPY3P0CV98 308 aa2.55□□□□□ -2
VPS41-206ENST00000418457 TSPY8P0CW00 308 aa2.55□□□□□ -2
VPS41-206ENST00000418457 UCHL3P15374 230 aa2.55□□□□□ -2
VPS41-206ENST00000418457 PORP16435 677 aaPredicted RBP2.55□□□□□ -2
VPS41-206ENST00000418457 GAP43P17677 238 aa2.55□□□□□ -2
VPS41-206ENST00000418457 ATP6V1C1P21283 382 aa2.55□□□□□ -2
VPS41-206ENST00000418457 CALB2P22676 271 aa2.55□□□□□ -2
VPS41-206ENST00000418457 BDNFP23560 247 aa2.55□□□□□ -2
VPS41-206ENST00000418457 DGKAP23743 735 aa2.55□□□□□ -2
VPS41-206ENST00000418457 NR2F2P24468 414 aa2.55□□□□□ -2
VPS41-206ENST00000418457 SLC15A1P46059 708 aa2.55□□□□□ -2
VPS41-206ENST00000418457 CCNHP51946 323 aaPredicted RBP2.55□□□□□ -2
VPS41-206ENST00000418457 FUT6P51993 359 aa2.55□□□□□ -2
VPS41-206ENST00000418457 MRPS5P82675 430 aaKnown RBP2.55□□□□□ -2
VPS41-206ENST00000418457 COG7P83436 770 aa2.55□□□□□ -2
VPS41-206ENST00000418457 RPL36AP83881 106 aaKnown RBP2.55□□□□□ -2
VPS41-206ENST00000418457 PLIN5Q00G26 463 aa2.55□□□□□ -2
VPS41-206ENST00000418457 IL9RQ01113 521 aa2.55□□□□□ -2
VPS41-206ENST00000418457 KLRC3Q07444 240 aa2.55□□□□□ -2
VPS41-206ENST00000418457 KLC1Q07866 573 aa2.55□□□□□ -2
VPS41-206ENST00000418457 EPS8Q12929 822 aa2.55□□□□□ -2
VPS41-206ENST00000418457 GTF2H2Q13888 395 aa2.55□□□□□ -2
VPS41-206ENST00000418457 KCNC3Q14003 757 aa2.55□□□□□ -2
VPS41-206ENST00000418457 SCN5AQ14524 2016 aa2.55□□□□□ -2
VPS41-206ENST00000418457 ZNF234Q14588 700 aa2.55□□□□□ -2
VPS41-206ENST00000418457 SYT16Q17RD7 645 aa2.55□□□□□ -2
VPS41-206ENST00000418457 ASPRV1Q53RT3 343 aa2.55□□□□□ -2
VPS41-206ENST00000418457 FAM133BQ5BKY9 247 aaKnown RBP2.55□□□□□ -2
VPS41-206ENST00000418457 ANKRD20A2Q5SQ80 823 aa2.55□□□□□ -2
VPS41-206ENST00000418457 ANKRD20A1Q5TYW2 823 aa2.55□□□□□ -2
VPS41-206ENST00000418457 ANKRD20A3Q5VUR7 823 aa2.55□□□□□ -2
VPS41-206ENST00000418457 WBP2NLQ6ICG8 309 aa2.55□□□□□ -2
VPS41-206ENST00000418457 GTF2H2CQ6P1K8 395 aa2.55□□□□□ -2
VPS41-206ENST00000418457 ZNF704Q6ZNC4 412 aaPredicted RBP2.55□□□□□ -2
VPS41-206ENST00000418457 RGS9BPQ6ZS82 235 aa2.55□□□□□ -2
VPS41-206ENST00000418457 FAM43BQ6ZT52 329 aaPredicted RBP2.55□□□□□ -2
VPS41-206ENST00000418457 C18orf65Q6ZTR6 163 aa2.55□□□□□ -2
VPS41-206ENST00000418457 TPRG1Q6ZUI0 275 aa2.55□□□□□ -2
VPS41-206ENST00000418457 TOM1L2Q6ZVM7 507 aa2.55□□□□□ -2
VPS41-206ENST00000418457 ASB18Q6ZVZ8 466 aa2.55□□□□□ -2
VPS41-206ENST00000418457 STXBP4Q6ZWJ1 553 aa2.55□□□□□ -2
VPS41-206ENST00000418457 ZNF571Q7Z3V5 609 aaPredicted RBP2.55□□□□□ -2
VPS41-206ENST00000418457 RBBP6Q7Z6E9 1792 aaKnown RBP2.55□□□□□ -2
VPS41-206ENST00000418457 PCGF5Q86SE9 256 aa2.55□□□□□ -2
VPS41-206ENST00000418457 ADGRA3Q8IWK6 1321 aa2.55□□□□□ -2
VPS41-206ENST00000418457 DCP1BQ8IZD4 617 aaKnown RBP2.55□□□□□ -2
VPS41-206ENST00000418457 SCYL3Q8IZE3 742 aa2.55□□□□□ -2
VPS41-206ENST00000418457 ZNF444Q8N0Y2 327 aaPredicted RBP2.55□□□□□ -2
VPS41-206ENST00000418457 TAGAPQ8N103 731 aa2.55□□□□□ -2
VPS41-206ENST00000418457 NAGSQ8N159 534 aa2.55□□□□□ -2
VPS41-206ENST00000418457 ARHGAP24Q8N264 748 aa2.55□□□□□ -2
VPS41-206ENST00000418457 SLC5A8Q8N695 610 aa2.55□□□□□ -2
VPS41-206ENST00000418457 GCSAMQ8N6F7 178 aa2.55□□□□□ -2
VPS41-206ENST00000418457 IL17RCQ8NAC3 791 aa2.55□□□□□ -2
VPS41-206ENST00000418457 POC1AQ8NBT0 407 aa2.55□□□□□ -2
VPS41-206ENST00000418457 SLC38A9Q8NBW4 561 aa2.55□□□□□ -2
VPS41-206ENST00000418457 PPFIBP2Q8ND30 876 aa2.55□□□□□ -2
VPS41-206ENST00000418457 ERMNQ8TAM6 284 aa2.55□□□□□ -2
VPS41-206ENST00000418457 TBCKQ8TEA7 893 aa2.55□□□□□ -2
VPS41-206ENST00000418457 PPP4R1Q8TF05 950 aa2.55□□□□□ -2
VPS41-206ENST00000418457 AGAP11Q8TF27 550 aa2.55□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms