RNA–Protein interactions for RNA: ENST00000418258.5

PTCH1-205, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 7,815 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-205ENST00000418258 ANKRD66B4E2M5 251 aa10.92□□□□□ -0.66
PTCH1-205ENST00000418258 DNM1LO00429 736 aa10.92□□□□□ -0.66
PTCH1-205ENST00000418258 AZGP1P25311 298 aaKnown RBP10.92□□□□□ -0.66
PTCH1-205ENST00000418258 ZNF280AP59817 542 aaPredicted RBP10.92□□□□□ -0.66
PTCH1-205ENST00000418258 JAGN1Q8N5M9 183 aa10.92□□□□□ -0.66
PTCH1-205ENST00000418258 OR10Q1Q8NGQ4 319 aa10.92□□□□□ -0.66
PTCH1-205ENST00000418258 GRHPRQ9UBQ7 328 aa10.92□□□□□ -0.66
PTCH1-205ENST00000418258 MAFFQ9ULX9 164 aa10.92□□□□□ -0.66
PTCH1-205ENST00000418258 GABRDO14764 452 aa10.92□□□□□ -0.66
PTCH1-205ENST00000418258 CDC40O60508 579 aaKnown RBP eCLIP10.92□□□□□ -0.66
PTCH1-205ENST00000418258 GBAP04062 536 aa10.92□□□□□ -0.66
PTCH1-205ENST00000418258 ITGB1P05556 798 aa10.92□□□□□ -0.66
PTCH1-205ENST00000418258 ZNF30P17039 623 aa10.92□□□□□ -0.66
PTCH1-205ENST00000418258 FUT4P22083 530 aa10.92□□□□□ -0.66
PTCH1-205ENST00000418258 ENTPD1P49961 510 aa10.92□□□□□ -0.66
PTCH1-205ENST00000418258 DPYSL2Q16555 572 aa10.92□□□□□ -0.66
PTCH1-205ENST00000418258 SCGB2B2Q4G0G5 96 aa10.92□□□□□ -0.66
PTCH1-205ENST00000418258 FRG2Q64ET8 278 aa10.92□□□□□ -0.66
PTCH1-205ENST00000418258 CLNKQ7Z7G1 428 aa10.92□□□□□ -0.66
PTCH1-205ENST00000418258 ACOT12Q8WYK0 555 aa10.92□□□□□ -0.66
PTCH1-205ENST00000418258 FRG2BQ96QU4 278 aa10.92□□□□□ -0.66
PTCH1-205ENST00000418258 MALT1Q9UDY8 824 aa10.92□□□□□ -0.66
PTCH1-205ENST00000418258 NAV1Q8NEY1 1877 aa10.91□□□□□ -0.66
PTCH1-205ENST00000418258 COL3A1P02461 1466 aaPredicted RBP10.91□□□□□ -0.66
PTCH1-205ENST00000418258 J3KR12 359 aa10.91□□□□□ -0.66
PTCH1-205ENST00000418258 LEFTY2O00292 366 aa10.91□□□□□ -0.66
PTCH1-205ENST00000418258 PEX14O75381 377 aa10.91□□□□□ -0.66
PTCH1-205ENST00000418258 ENGP17813 658 aa10.91□□□□□ -0.66
PTCH1-205ENST00000418258 PLP2Q04941 152 aa10.91□□□□□ -0.66
PTCH1-205ENST00000418258 IQCCQ4KMZ1 466 aa10.91□□□□□ -0.66
PTCH1-205ENST00000418258 TMEM225Q6GV28 225 aa10.91□□□□□ -0.66
PTCH1-205ENST00000418258 SUSD1Q6UWL2 747 aa10.91□□□□□ -0.66
PTCH1-205ENST00000418258 C4orf32Q8N8J7 132 aa10.91□□□□□ -0.66
PTCH1-205ENST00000418258 SH3YL1Q96HL8 342 aaPredicted RBP10.91□□□□□ -0.66
PTCH1-205ENST00000418258 PKP4Q99569 1192 aa10.91□□□□□ -0.66
PTCH1-205ENST00000418258 EFCAB11Q9BUY7 163 aa10.91□□□□□ -0.66
PTCH1-205ENST00000418258 UCK2Q9BZX2 261 aa10.91□□□□□ -0.66
PTCH1-205ENST00000418258 USP29Q9HBJ7 922 aa10.91□□□□□ -0.66
PTCH1-205ENST00000418258 MROH1Q8NDA8 1641 aa10.91□□□□□ -0.66
PTCH1-205ENST00000418258 RICTORQ6R327 1708 aa10.91□□□□□ -0.66
PTCH1-205ENST00000418258 POLR2CP19387 275 aaPredicted RBP10.91□□□□□ -0.66
PTCH1-205ENST00000418258 HSD3B2P26439 372 aa10.91□□□□□ -0.66
PTCH1-205ENST00000418258 ACVRL1P37023 503 aa10.91□□□□□ -0.66
PTCH1-205ENST00000418258 XIAPP98170 497 aa10.91□□□□□ -0.66
PTCH1-205ENST00000418258 TMPPEQ6ZT21 453 aa10.91□□□□□ -0.66
PTCH1-205ENST00000418258 ADGRD2Q7Z7M1 963 aa10.91□□□□□ -0.66
PTCH1-205ENST00000418258 P2RY13Q9BPV8 354 aa10.91□□□□□ -0.66
PTCH1-205ENST00000418258 NPLQ9BXD5 320 aaPredicted RBP10.91□□□□□ -0.66
PTCH1-205ENST00000418258 RAB26Q9ULW5 256 aa10.91□□□□□ -0.66
PTCH1-205ENST00000418258 ARFGEF2Q9Y6D5 1785 aa10.91□□□□□ -0.66
PTCH1-205ENST00000418258 NPIPA2E9PIF3 369 aa10.91□□□□□ -0.66
PTCH1-205ENST00000418258 NPIPA3F8WFD2 350 aa10.91□□□□□ -0.66
PTCH1-205ENST00000418258 GRID2O43424 1007 aa10.91□□□□□ -0.66
PTCH1-205ENST00000418258 TAS2R39P59534 338 aa10.91□□□□□ -0.66
PTCH1-205ENST00000418258 SEMA3AQ14563 771 aa10.91□□□□□ -0.66
PTCH1-205ENST00000418258 SPATC1Q76KD6 591 aa10.91□□□□□ -0.66
PTCH1-205ENST00000418258 LRRC70Q7Z2Q7 622 aa10.91□□□□□ -0.66
PTCH1-205ENST00000418258 VNN3Q9NY84 501 aa10.91□□□□□ -0.66
PTCH1-205ENST00000418258 IGSF9Q9P2J2 1179 aa10.91□□□□□ -0.66
PTCH1-205ENST00000418258 COMMD3-BMI1R4GMX3 469 aa10.91□□□□□ -0.66
PTCH1-205ENST00000418258 CICQ96RK0 1608 aaPredicted RBP10.91□□□□□ -0.66
PTCH1-205ENST00000418258 EME2A4GXA9 379 aaPredicted RBP10.91□□□□□ -0.66
PTCH1-205ENST00000418258 FOXO6A8MYZ6 492 aa10.91□□□□□ -0.66
PTCH1-205ENST00000418258 CLIC1O00299 241 aa10.91□□□□□ -0.66
PTCH1-205ENST00000418258 GRK5P34947 590 aa10.91□□□□□ -0.66
PTCH1-205ENST00000418258 RORCP51449 518 aa10.91□□□□□ -0.66
PTCH1-205ENST00000418258 HMGCS1Q01581 520 aa10.91□□□□□ -0.66
PTCH1-205ENST00000418258 SLC3A1Q07837 685 aa10.91□□□□□ -0.66
PTCH1-205ENST00000418258 TMEM214Q6NUQ4 689 aaKnown RBP10.91□□□□□ -0.66
PTCH1-205ENST00000418258 NATD1Q8N6N6 113 aa10.91□□□□□ -0.66
PTCH1-205ENST00000418258 OR5T2Q8NGG2 359 aa10.91□□□□□ -0.66
PTCH1-205ENST00000418258 THAP3Q8WTV1 239 aaPredicted RBP10.91□□□□□ -0.66
PTCH1-205ENST00000418258 GEMIN6Q8WXD5 167 aaKnown RBP10.91□□□□□ -0.66
PTCH1-205ENST00000418258 NINJ1Q92982 152 aa10.91□□□□□ -0.66
PTCH1-205ENST00000418258 TTYH2Q9BSA4 534 aa10.91□□□□□ -0.66
PTCH1-205ENST00000418258 LAMP5Q9UJQ1 280 aa10.91□□□□□ -0.66
PTCH1-205ENST00000418258 HNRNPH3P31942 346 aaKnown RBP10.91□□□□□ -0.66
PTCH1-205ENST00000418258 ERVK-8P63133 956 aa10.91□□□□□ -0.66
PTCH1-205ENST00000418258 FAXDC2Q96IV6 333 aa10.91□□□□□ -0.66
PTCH1-205ENST00000418258 RC3H2Q9HBD1 1191 aaKnown RBP10.91□□□□□ -0.66
PTCH1-205ENST00000418258 TIGARQ9NQ88 270 aa10.91□□□□□ -0.66
PTCH1-205ENST00000418258 HRASLS2Q9NWW9 162 aa10.91□□□□□ -0.66
PTCH1-205ENST00000418258 COMMD3Q9UBI1 195 aa10.91□□□□□ -0.66
PTCH1-205ENST00000418258 GNG8Q9UK08 70 aa10.91□□□□□ -0.66
PTCH1-205ENST00000418258 PCDHGB2Q9Y5G2 931 aa10.91□□□□□ -0.66
PTCH1-205ENST00000418258 MED1Q15648 1581 aaPredicted RBP10.91□□□□□ -0.66
PTCH1-205ENST00000418258 A0A0U1RQF3 1178 aa10.91□□□□□ -0.66
PTCH1-205ENST00000418258 ECI2O75521 394 aa10.91□□□□□ -0.66
PTCH1-205ENST00000418258 KIAA0930Q6ICG6 404 aaPredicted RBP10.91□□□□□ -0.66
PTCH1-205ENST00000418258 OGFOD2Q6N063 350 aa10.91□□□□□ -0.66
PTCH1-205ENST00000418258 SMPDL3AQ92484 453 aa10.91□□□□□ -0.66
PTCH1-205ENST00000418258 SAMD11Q96NU1 681 aa10.91□□□□□ -0.66
PTCH1-205ENST00000418258 POLR2J2Q9GZM3 115 aaKnown RBP10.91□□□□□ -0.66
PTCH1-205ENST00000418258 DZANK1Q9NVP4 752 aa10.91□□□□□ -0.66
PTCH1-205ENST00000418258 CYTH4Q9UIA0 394 aa10.91□□□□□ -0.66
PTCH1-205ENST00000418258 PSKH1P11801 424 aa10.9□□□□□ -0.66
PTCH1-205ENST00000418258 NR0B1P51843 470 aaKnown RBP10.9□□□□□ -0.66
PTCH1-205ENST00000418258 VSX2P58304 361 aaPredicted RBP10.9□□□□□ -0.66
PTCH1-205ENST00000418258 TMCO2Q7Z6W1 182 aaPredicted RBP10.9□□□□□ -0.66
PTCH1-205ENST00000418258 PLCZ1Q86YW0 608 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms