RNA–Protein interactions for RNA: ENST00000417997.1

HMGB3P20-201, Transcript of high mobility group box 3 pseudogene 20, humanhuman

BASIC

Gene HMGB3P20, Length 600 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P20-201ENST00000417997 MFN1Q8IWA4 741 aa3.76□□□□□ -1.81
HMGB3P20-201ENST00000417997 LAS2Q8IYD9 372 aa3.76□□□□□ -1.81
HMGB3P20-201ENST00000417997 ZNF683Q8IZ20 524 aa3.76□□□□□ -1.81
HMGB3P20-201ENST00000417997 UMODL1-AS1Q8N2C9 162 aa3.76□□□□□ -1.81
HMGB3P20-201ENST00000417997 CPXM2Q8N436 756 aa3.76□□□□□ -1.81
HMGB3P20-201ENST00000417997 OTUD6BQ8N6M0 293 aa3.76□□□□□ -1.81
HMGB3P20-201ENST00000417997 MRPL43Q8N983 215 aaKnown RBP3.76□□□□□ -1.81
HMGB3P20-201ENST00000417997 ZNF557Q8N988 423 aaPredicted RBP3.76□□□□□ -1.81
HMGB3P20-201ENST00000417997 FAM47BQ8NA70 645 aa3.76□□□□□ -1.81
HMGB3P20-201ENST00000417997 TDRD5Q8NAT2 981 aaKnown RBP3.76□□□□□ -1.81
HMGB3P20-201ENST00000417997 SRFBP1Q8NEF9 429 aaKnown RBP3.76□□□□□ -1.81
HMGB3P20-201ENST00000417997 OR52K1Q8NGK4 314 aa3.76□□□□□ -1.81
HMGB3P20-201ENST00000417997 GABPB2Q8TAK5 448 aaPredicted RBP3.76□□□□□ -1.81
HMGB3P20-201ENST00000417997 GSDMBQ8TAX9 411 aa3.76□□□□□ -1.81
HMGB3P20-201ENST00000417997 DDI1Q8WTU0 396 aa3.76□□□□□ -1.81
HMGB3P20-201ENST00000417997 ZFPM2Q8WW38 1151 aa3.76□□□□□ -1.81
HMGB3P20-201ENST00000417997 ARNTL2Q8WYA1 636 aa3.76□□□□□ -1.81
HMGB3P20-201ENST00000417997 ARHGEF2Q92974 986 aaKnown RBP3.76□□□□□ -1.81
HMGB3P20-201ENST00000417997 AZIN2Q96A70 460 aa3.76□□□□□ -1.81
HMGB3P20-201ENST00000417997 PGM2Q96G03 612 aa3.76□□□□□ -1.81
HMGB3P20-201ENST00000417997 ABHD8Q96I13 439 aa3.76□□□□□ -1.81
HMGB3P20-201ENST00000417997 XPO6Q96QU8 1125 aaKnown RBP3.76□□□□□ -1.81
HMGB3P20-201ENST00000417997 SMC6Q96SB8 1091 aa3.76□□□□□ -1.81
HMGB3P20-201ENST00000417997 CYTH2Q99418 400 aa3.76□□□□□ -1.81
HMGB3P20-201ENST00000417997 PAFAH2Q99487 392 aa3.76□□□□□ -1.81
HMGB3P20-201ENST00000417997 IL12RB2Q99665 862 aa3.76□□□□□ -1.81
HMGB3P20-201ENST00000417997 EBNA1BP2Q99848 306 aaKnown RBP3.76□□□□□ -1.81
HMGB3P20-201ENST00000417997 TBL1YQ9BQ87 522 aa3.76□□□□□ -1.81
HMGB3P20-201ENST00000417997 ZPBPQ9BS86 351 aa3.76□□□□□ -1.81
HMGB3P20-201ENST00000417997 TMEM109Q9BVC6 243 aa3.76□□□□□ -1.81
HMGB3P20-201ENST00000417997 SARGQ9BW04 601 aa3.76□□□□□ -1.81
HMGB3P20-201ENST00000417997 CAPS2Q9BXY5 557 aa3.76□□□□□ -1.81
HMGB3P20-201ENST00000417997 POLR1EQ9GZS1 481 aaKnown RBP3.76□□□□□ -1.81
HMGB3P20-201ENST00000417997 MAGEH1Q9H213 219 aa3.76□□□□□ -1.81
HMGB3P20-201ENST00000417997 TASP1Q9H6P5 420 aa3.76□□□□□ -1.81
HMGB3P20-201ENST00000417997 TLE6Q9H808 572 aa3.76□□□□□ -1.81
HMGB3P20-201ENST00000417997 SFXN1Q9H9B4 322 aa3.76□□□□□ -1.81
HMGB3P20-201ENST00000417997 CERS4Q9HA82 394 aa3.76□□□□□ -1.81
HMGB3P20-201ENST00000417997 FZD3Q9NPG1 666 aa3.76□□□□□ -1.81
HMGB3P20-201ENST00000417997 PPANQ9NQ55 473 aaKnown RBP3.76□□□□□ -1.81
HMGB3P20-201ENST00000417997 GKN1Q9NS71 199 aa3.76□□□□□ -1.81
HMGB3P20-201ENST00000417997 RXFP3Q9NSD7 469 aa3.76□□□□□ -1.81
HMGB3P20-201ENST00000417997 HCFC1R1Q9NWW0 138 aa3.76□□□□□ -1.81
HMGB3P20-201ENST00000417997 ZDHHC7Q9NXF8 308 aa3.76□□□□□ -1.81
HMGB3P20-201ENST00000417997 NKIRAS1Q9NYS0 192 aa3.76□□□□□ -1.81
HMGB3P20-201ENST00000417997 SENP1Q9P0U3 644 aa3.76□□□□□ -1.81
HMGB3P20-201ENST00000417997 CTNNAL1Q9UBT7 734 aa3.76□□□□□ -1.81
HMGB3P20-201ENST00000417997 TBK1Q9UHD2 729 aa3.76□□□□□ -1.81
HMGB3P20-201ENST00000417997 SLC24A2Q9UI40 661 aa3.76□□□□□ -1.81
HMGB3P20-201ENST00000417997 VPS28Q9UK41 221 aa3.76□□□□□ -1.81
HMGB3P20-201ENST00000417997 AGO1Q9UL18 857 aaKnown RBP3.76□□□□□ -1.81
HMGB3P20-201ENST00000417997 UBE2J1Q9Y385 318 aaPredicted RBP3.76□□□□□ -1.81
HMGB3P20-201ENST00000417997 LRP12Q9Y561 859 aa3.76□□□□□ -1.81
HMGB3P20-201ENST00000417997 NFS1Q9Y697 457 aa3.76□□□□□ -1.81
HMGB3P20-201ENST00000417997 TEX264Q9Y6I9 313 aa3.76□□□□□ -1.81
HMGB3P20-201ENST00000417997 FAM169AQ9Y6X4 670 aa3.76□□□□□ -1.81
HMGB3P20-201ENST00000417997 NUP205Q92621 2012 aa3.76□□□□□ -1.81
HMGB3P20-201ENST00000417997 MYO18AQ92614 2054 aaKnown RBP3.75□□□□□ -1.81
HMGB3P20-201ENST00000417997 HSFX4A0A1B0GTS1 333 aaPredicted RBP3.75□□□□□ -1.81
HMGB3P20-201ENST00000417997 HSFX3A0A1B0GWH4 333 aaPredicted RBP3.75□□□□□ -1.81
HMGB3P20-201ENST00000417997 TCRBV9S1A1TA0A576 114 aa3.75□□□□□ -1.81
HMGB3P20-201ENST00000417997 ILVBLA1L0T0 632 aa3.75□□□□□ -1.81
HMGB3P20-201ENST00000417997 A6NNC1 897 aa3.75□□□□□ -1.81
HMGB3P20-201ENST00000417997 J3KR12 359 aa3.75□□□□□ -1.81
HMGB3P20-201ENST00000417997 PER2O15055 1255 aa3.75□□□□□ -1.81
HMGB3P20-201ENST00000417997 KDELR3O43731 214 aa3.75□□□□□ -1.81
HMGB3P20-201ENST00000417997 PRAMEF11O60813 436 aa3.75□□□□□ -1.81
HMGB3P20-201ENST00000417997 AVILO75366 819 aa3.75□□□□□ -1.81
HMGB3P20-201ENST00000417997 RFPL2O75678 378 aa3.75□□□□□ -1.81
HMGB3P20-201ENST00000417997 KRT38O76015 456 aa3.75□□□□□ -1.81
HMGB3P20-201ENST00000417997 MT-CYBP00156 380 aaPredicted RBP3.75□□□□□ -1.81
HMGB3P20-201ENST00000417997 KLKB1P03952 638 aa3.75□□□□□ -1.81
HMGB3P20-201ENST00000417997 SERPINF2P08697 491 aa3.75□□□□□ -1.81
HMGB3P20-201ENST00000417997 RFPL3SP0C7P2 107 aa3.75□□□□□ -1.81
HMGB3P20-201ENST00000417997 CHRNB1P11230 501 aa3.75□□□□□ -1.81
HMGB3P20-201ENST00000417997 DNAJB1P25685 340 aa3.75□□□□□ -1.81
HMGB3P20-201ENST00000417997 CSKP41240 450 aa3.75□□□□□ -1.81
HMGB3P20-201ENST00000417997 CD86P42081 329 aa3.75□□□□□ -1.81
HMGB3P20-201ENST00000417997 GRIA1P42261 906 aa3.75□□□□□ -1.81
HMGB3P20-201ENST00000417997 MAGEA3P43357 314 aa3.75□□□□□ -1.81
HMGB3P20-201ENST00000417997 IFNAR2P48551 515 aa3.75□□□□□ -1.81
HMGB3P20-201ENST00000417997 NPY2RP49146 381 aa3.75□□□□□ -1.81
HMGB3P20-201ENST00000417997 NUMBP49757 651 aa3.75□□□□□ -1.81
HMGB3P20-201ENST00000417997 SERPINB9P50453 376 aa3.75□□□□□ -1.81
HMGB3P20-201ENST00000417997 SGSHP51688 502 aa3.75□□□□□ -1.81
HMGB3P20-201ENST00000417997 SLC37A1P57057 533 aa3.75□□□□□ -1.81
HMGB3P20-201ENST00000417997 GPX6P59796 221 aa3.75□□□□□ -1.81
HMGB3P20-201ENST00000417997 CRADDP78560 199 aa3.75□□□□□ -1.81
HMGB3P20-201ENST00000417997 NAB1Q13506 487 aa3.75□□□□□ -1.81
HMGB3P20-201ENST00000417997 RFTN1Q14699 578 aaPredicted RBP3.75□□□□□ -1.81
HMGB3P20-201ENST00000417997 CRYMQ14894 314 aa3.75□□□□□ -1.81
HMGB3P20-201ENST00000417997 TUBB8Q3ZCM7 444 aa3.75□□□□□ -1.81
HMGB3P20-201ENST00000417997 KBTBD12Q3ZCT8 623 aa3.75□□□□□ -1.81
HMGB3P20-201ENST00000417997 C5orf22Q49AR2 442 aa3.75□□□□□ -1.81
HMGB3P20-201ENST00000417997 STXBP5Q5T5C0 1151 aa3.75□□□□□ -1.81
HMGB3P20-201ENST00000417997 RETSATQ6NUM9 610 aa3.75□□□□□ -1.81
HMGB3P20-201ENST00000417997 TPGS1Q6ZTW0 290 aa3.75□□□□□ -1.81
HMGB3P20-201ENST00000417997 MARK2Q7KZI7 788 aaKnown RBP3.75□□□□□ -1.81
HMGB3P20-201ENST00000417997 ZNF771Q7L3S4 317 aaPredicted RBP3.75□□□□□ -1.81
HMGB3P20-201ENST00000417997 GET4Q7L5D6 327 aaPredicted RBP3.75□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms