RNA–Protein interactions for RNA: ENST00000416728.3

PAF1-202, Transcript of PAF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene PAF1, Length 1,383 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1-202ENST00000416728 MLNP12872 115 aa13.69□□□□□ -0.22
PAF1-202ENST00000416728 ICAM2P13598 275 aa13.69□□□□□ -0.22
PAF1-202ENST00000416728 AVPR1BP47901 424 aa13.69□□□□□ -0.22
PAF1-202ENST00000416728 MAT1AQ00266 395 aaKnown RBP13.69□□□□□ -0.22
PAF1-202ENST00000416728 CTBP1Q13363 440 aa13.69□□□□□ -0.22
PAF1-202ENST00000416728 PCOLCEQ15113 449 aa13.69□□□□□ -0.22
PAF1-202ENST00000416728 ANKRD22Q5VYY1 191 aa13.69□□□□□ -0.22
PAF1-202ENST00000416728 ZNF324BQ6AW86 544 aaPredicted RBP13.69□□□□□ -0.22
PAF1-202ENST00000416728 ZNF662Q6ZS27 426 aa13.69□□□□□ -0.22
PAF1-202ENST00000416728 TICAM1Q8IUC6 712 aa13.69□□□□□ -0.22
PAF1-202ENST00000416728 PLD3Q8IV08 490 aa13.69□□□□□ -0.22
PAF1-202ENST00000416728 DENND6AQ8IWF6 608 aa13.69□□□□□ -0.22
PAF1-202ENST00000416728 METTL21AQ8WXB1 218 aa13.69□□□□□ -0.22
PAF1-202ENST00000416728 NR4A3Q92570 626 aa13.69□□□□□ -0.22
PAF1-202ENST00000416728 TAAR6Q96RI8 345 aa13.69□□□□□ -0.22
PAF1-202ENST00000416728 ZNF700Q9H0M5 742 aa13.69□□□□□ -0.22
PAF1-202ENST00000416728 XAB2Q9HCS7 855 aaKnown RBP13.69□□□□□ -0.22
PAF1-202ENST00000416728 MDC1Q14676 2089 aaKnown RBP13.68□□□□□ -0.22
PAF1-202ENST00000416728 H7BY64 318 aa13.68□□□□□ -0.22
PAF1-202ENST00000416728 GFYI3L273 518 aa13.68□□□□□ -0.22
PAF1-202ENST00000416728 WDPCPO95876 746 aa13.68□□□□□ -0.22
PAF1-202ENST00000416728 C8orf89P0DMQ9 161 aa13.68□□□□□ -0.22
PAF1-202ENST00000416728 ITGAMP11215 1152 aa13.68□□□□□ -0.22
PAF1-202ENST00000416728 SKIV2L2P42285 1042 aaKnown RBP13.68□□□□□ -0.22
PAF1-202ENST00000416728 SLC1A2P43004 574 aa13.68□□□□□ -0.22
PAF1-202ENST00000416728 TDGF1P3P51864 188 aa13.68□□□□□ -0.22
PAF1-202ENST00000416728 KCNK10P57789 538 aa13.68□□□□□ -0.22
PAF1-202ENST00000416728 ABHD17BQ5VST6 288 aa13.68□□□□□ -0.22
PAF1-202ENST00000416728 C1QL3Q5VWW1 255 aa13.68□□□□□ -0.22
PAF1-202ENST00000416728 HIBCHQ6NVY1 386 aaPredicted RBP13.68□□□□□ -0.22
PAF1-202ENST00000416728 ZNF549Q6P9A3 640 aa13.68□□□□□ -0.22
PAF1-202ENST00000416728 TMEM205Q6UW68 189 aa13.68□□□□□ -0.22
PAF1-202ENST00000416728 OR9A4Q8NGU2 314 aa13.68□□□□□ -0.22
PAF1-202ENST00000416728 SUN3Q8TAQ9 357 aa13.68□□□□□ -0.22
PAF1-202ENST00000416728 PRAP1Q96NZ9 151 aa13.68□□□□□ -0.22
PAF1-202ENST00000416728 GPR21Q99679 349 aa13.68□□□□□ -0.22
PAF1-202ENST00000416728 TUBB6Q9BUF5 446 aa13.68□□□□□ -0.22
PAF1-202ENST00000416728 RNF32Q9H0A6 362 aa13.68□□□□□ -0.22
PAF1-202ENST00000416728 TEKT2Q9UIF3 430 aa13.68□□□□□ -0.22
PAF1-202ENST00000416728 MED16Q9Y2X0 877 aa13.68□□□□□ -0.22
PAF1-202ENST00000416728 DHRS7Q9Y394 339 aa13.68□□□□□ -0.22
PAF1-202ENST00000416728 CREBBPQ92793 2442 aa13.68□□□□□ -0.22
PAF1-202ENST00000416728 ZCWPW2A0A1B0GU75 182 aa13.67□□□□□ -0.22
PAF1-202ENST00000416728 H0YIG0 161 aa13.67□□□□□ -0.22
PAF1-202ENST00000416728 GOLGA8MH3BSY2 632 aa13.67□□□□□ -0.22
PAF1-202ENST00000416728 HNRNPRO43390 633 aaKnown RBP13.67□□□□□ -0.22
PAF1-202ENST00000416728 KIF5CO60282 957 aa13.67□□□□□ -0.22
PAF1-202ENST00000416728 STATHP02808 62 aa13.67□□□□□ -0.22
PAF1-202ENST00000416728 MYBL2P10244 700 aa13.67□□□□□ -0.22
PAF1-202ENST00000416728 HRH2P25021 359 aa13.67□□□□□ -0.22
PAF1-202ENST00000416728 IMPA1P29218 277 aa13.67□□□□□ -0.22
PAF1-202ENST00000416728 MINDY4Q4G0A6 757 aa13.67□□□□□ -0.22
PAF1-202ENST00000416728 MFSD4BQ5TF39 518 aa13.67□□□□□ -0.22
PAF1-202ENST00000416728 GFRALQ6UXV0 394 aa13.67□□□□□ -0.22
PAF1-202ENST00000416728 CYHR1Q6ZMK1 362 aa13.67□□□□□ -0.22
PAF1-202ENST00000416728 UBE2R2Q712K3 238 aaPredicted RBP13.67□□□□□ -0.22
PAF1-202ENST00000416728 PIWIL4Q7Z3Z4 852 aaKnown RBP13.67□□□□□ -0.22
PAF1-202ENST00000416728 SPNS2Q8IVW8 549 aa13.67□□□□□ -0.22
PAF1-202ENST00000416728 LMNTD2Q8IXW0 634 aa13.67□□□□□ -0.22
PAF1-202ENST00000416728 LRRC56Q8IYG6 542 aaPredicted RBP13.67□□□□□ -0.22
PAF1-202ENST00000416728 CPNE9Q8IYJ1 553 aa13.67□□□□□ -0.22
PAF1-202ENST00000416728 MCUQ8NE86 351 aa13.67□□□□□ -0.22
PAF1-202ENST00000416728 CD200R1Q8TD46 325 aa13.67□□□□□ -0.22
PAF1-202ENST00000416728 CALML6Q8TD86 181 aa13.67□□□□□ -0.22
PAF1-202ENST00000416728 MCOLN3Q8TDD5 553 aa13.67□□□□□ -0.22
PAF1-202ENST00000416728 RELTQ969Z4 430 aa13.67□□□□□ -0.22
PAF1-202ENST00000416728 IMMP1LQ96LU5 166 aa13.67□□□□□ -0.22
PAF1-202ENST00000416728 SERPINB12Q96P63 405 aa13.67□□□□□ -0.22
PAF1-202ENST00000416728 VN1R1Q9GZP7 353 aa13.67□□□□□ -0.22
PAF1-202ENST00000416728 CCDC177Q9NQR7 707 aaPredicted RBP13.67□□□□□ -0.22
PAF1-202ENST00000416728 C20orf96Q9NUD7 363 aaPredicted RBP13.67□□□□□ -0.22
PAF1-202ENST00000416728 TMEM184CQ9NVA4 438 aa13.67□□□□□ -0.22
PAF1-202ENST00000416728 ENTPD4Q9Y227 616 aa13.67□□□□□ -0.22
PAF1-202ENST00000416728 MAD1L1Q9Y6D9 718 aa13.67□□□□□ -0.22
PAF1-202ENST00000416728 COMMD10Q9Y6G5 202 aa13.67□□□□□ -0.22
PAF1-202ENST00000416728 CACNA1DQ01668 2161 aa13.67□□□□□ -0.22
PAF1-202ENST00000416728 ARHGAP10A1A4S6 786 aa13.66□□□□□ -0.22
PAF1-202ENST00000416728 OR5H15A6NDH6 313 aa13.66□□□□□ -0.22
PAF1-202ENST00000416728 RASAL1O95294 804 aa13.66□□□□□ -0.22
PAF1-202ENST00000416728 NSA2O95478 260 aaKnown RBP13.66□□□□□ -0.22
PAF1-202ENST00000416728 CRYABP02511 175 aaKnown RBP13.66□□□□□ -0.22
PAF1-202ENST00000416728 CYC1P08574 325 aa13.66□□□□□ -0.22
PAF1-202ENST00000416728 EFNA3P52797 238 aa13.66□□□□□ -0.22
PAF1-202ENST00000416728 RPS15AP62244 130 aaKnown RBP13.66□□□□□ -0.22
PAF1-202ENST00000416728 TBPL1P62380 186 aa13.66□□□□□ -0.22
PAF1-202ENST00000416728 ZNF33BQ06732 778 aa13.66□□□□□ -0.22
PAF1-202ENST00000416728 LONRF1Q17RB8 773 aa13.66□□□□□ -0.22
PAF1-202ENST00000416728 TTC27Q6P3X3 843 aa13.66□□□□□ -0.22
PAF1-202ENST00000416728 VN1R4Q7Z5H5 301 aa13.66□□□□□ -0.22
PAF1-202ENST00000416728 MARVELD3Q96A59 401 aa13.66□□□□□ -0.22
PAF1-202ENST00000416728 MAGOHBQ96A72 148 aaKnown RBP13.66□□□□□ -0.22
PAF1-202ENST00000416728 STMN3Q9NZ72 180 aa13.66□□□□□ -0.22
PAF1-202ENST00000416728 ABI3Q9P2A4 366 aa13.66□□□□□ -0.22
PAF1-202ENST00000416728 COPG2Q9UBF2 871 aa13.66□□□□□ -0.22
PAF1-202ENST00000416728 C19orf25Q9UFG5 118 aaPredicted RBP13.66□□□□□ -0.22
PAF1-202ENST00000416728 FBXO5Q9UKT4 447 aa13.66□□□□□ -0.22
PAF1-202ENST00000416728 CROCCQ5TZA2 2017 aa13.65□□□□□ -0.22
PAF1-202ENST00000416728 KCNE1BA0A087WTH5 132 aa13.65□□□□□ -0.22
PAF1-202ENST00000416728 PRSS44E7EML9 344 aa13.65□□□□□ -0.22
PAF1-202ENST00000416728 EIF3FO00303 357 aaPredicted RBP13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms