RNA–Protein interactions for RNA: ENST00000413374.1

NCKIPSD-202, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 3

Gene NCKIPSD, Length 725 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-202ENST00000413374 CEACAM4O75871 244 aa9.68□□□□□ -0.86
NCKIPSD-202ENST00000413374 FAM155BO75949 473 aa9.68□□□□□ -0.86
NCKIPSD-202ENST00000413374 ONECUT2O95948 504 aa9.68□□□□□ -0.86
NCKIPSD-202ENST00000413374 SERPIND1P05546 499 aa9.68□□□□□ -0.86
NCKIPSD-202ENST00000413374 ANXA5P08758 320 aa9.68□□□□□ -0.86
NCKIPSD-202ENST00000413374 ITGA3P26006 1051 aa9.68□□□□□ -0.86
NCKIPSD-202ENST00000413374 BCL6P41182 706 aa9.68□□□□□ -0.86
NCKIPSD-202ENST00000413374 SLC12A2P55011 1212 aa9.68□□□□□ -0.86
NCKIPSD-202ENST00000413374 GPX6P59796 221 aa9.68□□□□□ -0.86
NCKIPSD-202ENST00000413374 FRG1Q14331 258 aaKnown RBP9.68□□□□□ -0.86
NCKIPSD-202ENST00000413374 C18orf21Q32NC0 220 aaPredicted RBP9.68□□□□□ -0.86
NCKIPSD-202ENST00000413374 CATSPEREQ5SY80 951 aa9.68□□□□□ -0.86
NCKIPSD-202ENST00000413374 CAPN13Q6MZZ7 669 aaPredicted RBP9.68□□□□□ -0.86
NCKIPSD-202ENST00000413374 KIRREL2Q6UWL6 708 aa9.68□□□□□ -0.86
NCKIPSD-202ENST00000413374 ZDHHC24Q6UX98 284 aa9.68□□□□□ -0.86
NCKIPSD-202ENST00000413374 PRSS41Q7RTY9 318 aa9.68□□□□□ -0.86
NCKIPSD-202ENST00000413374 VN1R4Q7Z5H5 301 aa9.68□□□□□ -0.86
NCKIPSD-202ENST00000413374 SLC26A11Q86WA9 606 aa9.68□□□□□ -0.86
NCKIPSD-202ENST00000413374 CTAGE3PQ8IX95 158 aa9.68□□□□□ -0.86
NCKIPSD-202ENST00000413374 NKAPQ8N5F7 415 aaKnown RBP9.68□□□□□ -0.86
NCKIPSD-202ENST00000413374 OR9A4Q8NGU2 314 aa9.68□□□□□ -0.86
NCKIPSD-202ENST00000413374 ZCCHC10Q8TBK6 192 aa9.68□□□□□ -0.86
NCKIPSD-202ENST00000413374 FBXO25Q8TCJ0 367 aa9.68□□□□□ -0.86
NCKIPSD-202ENST00000413374 MRRFQ96E11 262 aaKnown RBP9.68□□□□□ -0.86
NCKIPSD-202ENST00000413374 TSNARE1Q96NA8 513 aa9.68□□□□□ -0.86
NCKIPSD-202ENST00000413374 IP6K3Q96PC2 410 aa9.68□□□□□ -0.86
NCKIPSD-202ENST00000413374 OR4K3Q96R72 315 aa9.68□□□□□ -0.86
NCKIPSD-202ENST00000413374 EGFL8Q99944 293 aa9.68□□□□□ -0.86
NCKIPSD-202ENST00000413374 LRRC1Q9BTT6 524 aa9.68□□□□□ -0.86
NCKIPSD-202ENST00000413374 SGPP1Q9BX95 441 aa9.68□□□□□ -0.86
NCKIPSD-202ENST00000413374 SLC26A1Q9H2B4 701 aa9.68□□□□□ -0.86
NCKIPSD-202ENST00000413374 ZNF552Q9H707 407 aaPredicted RBP9.68□□□□□ -0.86
NCKIPSD-202ENST00000413374 ZBTB20Q9HC78 741 aaPredicted RBP9.68□□□□□ -0.86
NCKIPSD-202ENST00000413374 GPAMQ9HCL2 828 aa9.68□□□□□ -0.86
NCKIPSD-202ENST00000413374 TXNDC16Q9P2K2 825 aa9.68□□□□□ -0.86
NCKIPSD-202ENST00000413374 C3orf18Q9UK00 162 aa9.68□□□□□ -0.86
NCKIPSD-202ENST00000413374 CDC14AQ9UNH5 594 aa9.68□□□□□ -0.86
NCKIPSD-202ENST00000413374 HS3ST3B1Q9Y662 390 aa9.68□□□□□ -0.86
NCKIPSD-202ENST00000413374 ZNF462Q96JM2 2506 aa9.68□□□□□ -0.86
NCKIPSD-202ENST00000413374 TCRBV9S1A1TA0A576 114 aa9.67□□□□□ -0.86
NCKIPSD-202ENST00000413374 OR2W5A6NFC9 320 aa9.67□□□□□ -0.86
NCKIPSD-202ENST00000413374 NCF1BA6NI72 391 aaPredicted RBP9.67□□□□□ -0.86
NCKIPSD-202ENST00000413374 NCF1CA8MVU1 366 aaPredicted RBP9.67□□□□□ -0.86
NCKIPSD-202ENST00000413374 SGK494L7N484 410 aa9.67□□□□□ -0.86
NCKIPSD-202ENST00000413374 PHGDHO43175 533 aaKnown RBP9.67□□□□□ -0.86
NCKIPSD-202ENST00000413374 OR1F1O43749 312 aa9.67□□□□□ -0.86
NCKIPSD-202ENST00000413374 JRKO75564 520 aa9.67□□□□□ -0.86
NCKIPSD-202ENST00000413374 HEXBP07686 556 aa9.67□□□□□ -0.86
NCKIPSD-202ENST00000413374 NCF1P14598 390 aaPredicted RBP9.67□□□□□ -0.86
NCKIPSD-202ENST00000413374 ZNF37AP17032 561 aaPredicted RBP9.67□□□□□ -0.86
NCKIPSD-202ENST00000413374 IL1RNP18510 177 aa9.67□□□□□ -0.86
NCKIPSD-202ENST00000413374 HRH2P25021 359 aa9.67□□□□□ -0.86
NCKIPSD-202ENST00000413374 GMPRP36959 345 aa9.67□□□□□ -0.86
NCKIPSD-202ENST00000413374 GDF5P43026 501 aa9.67□□□□□ -0.86
NCKIPSD-202ENST00000413374 MAGEA4P43358 317 aa9.67□□□□□ -0.86
NCKIPSD-202ENST00000413374 AVPR1BP47901 424 aa9.67□□□□□ -0.86
NCKIPSD-202ENST00000413374 CD97P48960 835 aa9.67□□□□□ -0.86
NCKIPSD-202ENST00000413374 EMP2P54851 167 aa9.67□□□□□ -0.86
NCKIPSD-202ENST00000413374 RPS15AP62244 130 aaKnown RBP9.67□□□□□ -0.86
NCKIPSD-202ENST00000413374 FOXK1P85037 733 aa9.67□□□□□ -0.86
NCKIPSD-202ENST00000413374 EEF1A2Q05639 463 aaKnown RBP9.67□□□□□ -0.86
NCKIPSD-202ENST00000413374 CSHL1Q14406 222 aa9.67□□□□□ -0.86
NCKIPSD-202ENST00000413374 USP10Q14694 798 aaKnown RBP9.67□□□□□ -0.86
NCKIPSD-202ENST00000413374 TSNQ15631 228 aaKnown RBP9.67□□□□□ -0.86
NCKIPSD-202ENST00000413374 NDUFA9Q16795 377 aa9.67□□□□□ -0.86
NCKIPSD-202ENST00000413374 FBXO48Q5FWF7 155 aa9.67□□□□□ -0.86
NCKIPSD-202ENST00000413374 MFSD4BQ5TF39 518 aa9.67□□□□□ -0.86
NCKIPSD-202ENST00000413374 LCTLQ6UWM7 567 aa9.67□□□□□ -0.86
NCKIPSD-202ENST00000413374 RBMXL3Q8N7X1 1067 aaKnown RBP9.67□□□□□ -0.86
NCKIPSD-202ENST00000413374 PPM1NQ8N819 430 aa9.67□□□□□ -0.86
NCKIPSD-202ENST00000413374 AMER3Q8N944 861 aa9.67□□□□□ -0.86
NCKIPSD-202ENST00000413374 KCT2Q8NC54 265 aa9.67□□□□□ -0.86
NCKIPSD-202ENST00000413374 ZNF740Q8NDX6 193 aa9.67□□□□□ -0.86
NCKIPSD-202ENST00000413374 SLC13A3Q8WWT9 602 aa9.67□□□□□ -0.86
NCKIPSD-202ENST00000413374 CDKL2Q92772 493 aa9.67□□□□□ -0.86
NCKIPSD-202ENST00000413374 FBXL8Q96CD0 374 aa9.67□□□□□ -0.86
NCKIPSD-202ENST00000413374 MOCOSQ96EN8 888 aa9.67□□□□□ -0.86
NCKIPSD-202ENST00000413374 VPS39Q96JC1 886 aa9.67□□□□□ -0.86
NCKIPSD-202ENST00000413374 DRC3Q9H069 523 aa9.67□□□□□ -0.86
NCKIPSD-202ENST00000413374 PCBD2Q9H0N5 130 aa9.67□□□□□ -0.86
NCKIPSD-202ENST00000413374 RAB17Q9H0T7 212 aa9.67□□□□□ -0.86
NCKIPSD-202ENST00000413374 RHOJQ9H4E5 214 aa9.67□□□□□ -0.86
NCKIPSD-202ENST00000413374 WDR54Q9H977 334 aa9.67□□□□□ -0.86
NCKIPSD-202ENST00000413374 ZNF160Q9HCG1 818 aa9.67□□□□□ -0.86
NCKIPSD-202ENST00000413374 SLAMF7Q9NQ25 335 aa9.67□□□□□ -0.86
NCKIPSD-202ENST00000413374 ENAMQ9NRM1 1142 aa9.67□□□□□ -0.86
NCKIPSD-202ENST00000413374 SEMA3GQ9NS98 782 aa9.67□□□□□ -0.86
NCKIPSD-202ENST00000413374 NSMCE4AQ9NXX6 385 aa9.67□□□□□ -0.86
NCKIPSD-202ENST00000413374 HCN3Q9P1Z3 774 aa9.67□□□□□ -0.86
NCKIPSD-202ENST00000413374 CTNNAL1Q9UBT7 734 aa9.67□□□□□ -0.86
NCKIPSD-202ENST00000413374 NXT1Q9UKK6 140 aaKnown RBP9.67□□□□□ -0.86
NCKIPSD-202ENST00000413374 SLC22A14Q9Y267 594 aa9.67□□□□□ -0.86
NCKIPSD-202ENST00000413374 FASNP49327 2511 aaKnown RBP9.67□□□□□ -0.86
NCKIPSD-202ENST00000413374 PCSK5Q92824 1860 aa9.67□□□□□ -0.86
NCKIPSD-202ENST00000413374 TXNDC9O14530 226 aa9.66□□□□□ -0.86
NCKIPSD-202ENST00000413374 EIF3HO15372 352 aaKnown RBP eCLIP9.66□□□□□ -0.86
NCKIPSD-202ENST00000413374 DPM1O60762 260 aa9.66□□□□□ -0.86
NCKIPSD-202ENST00000413374 DNAJB6O75190 326 aa9.66□□□□□ -0.86
NCKIPSD-202ENST00000413374 B3GALT4O96024 378 aa9.66□□□□□ -0.86
NCKIPSD-202ENST00000413374 IGHEP01854 428 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms