RNA–Protein interactions for RNA: ENST00000409810.6

CHMP3-205, Transcript of charged multivesicular body protein 3, humanhuman

TSL 5

Gene CHMP3, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-205ENST00000409810 CXCR2P25025 360 aa10.42□□□□□ -0.74
CHMP3-205ENST00000409810 PTPN4P29074 926 aa10.42□□□□□ -0.74
CHMP3-205ENST00000409810 MAGEA12P43365 314 aa10.42□□□□□ -0.74
CHMP3-205ENST00000409810 SLC6A12P48065 614 aa10.42□□□□□ -0.74
CHMP3-205ENST00000409810 CSRP3P50461 194 aa10.42□□□□□ -0.74
CHMP3-205ENST00000409810 CDC16Q13042 620 aa10.42□□□□□ -0.74
CHMP3-205ENST00000409810 NCF4Q15080 339 aa10.42□□□□□ -0.74
CHMP3-205ENST00000409810 NDUFA9Q16795 377 aa10.42□□□□□ -0.74
CHMP3-205ENST00000409810 C1orf189Q5VU69 101 aa10.42□□□□□ -0.74
CHMP3-205ENST00000409810 ZNF385CQ66K41 422 aaPredicted RBP10.42□□□□□ -0.74
CHMP3-205ENST00000409810 TTLL10Q6ZVT0 673 aa10.42□□□□□ -0.74
CHMP3-205ENST00000409810 LRRC70Q7Z2Q7 622 aa10.42□□□□□ -0.74
CHMP3-205ENST00000409810 TMPRSS11BQ86T26 416 aa10.42□□□□□ -0.74
CHMP3-205ENST00000409810 SYVN1Q86TM6 617 aa10.42□□□□□ -0.74
CHMP3-205ENST00000409810 ISCA2Q86U28 154 aa10.42□□□□□ -0.74
CHMP3-205ENST00000409810 KLHDC8AQ8IYD2 350 aa10.42□□□□□ -0.74
CHMP3-205ENST00000409810 CENPLQ8N0S6 344 aaPredicted RBP10.42□□□□□ -0.74
CHMP3-205ENST00000409810 OR4N4Q8N0Y3 316 aa10.42□□□□□ -0.74
CHMP3-205ENST00000409810 CAMKVQ8NCB2 501 aa10.42□□□□□ -0.74
CHMP3-205ENST00000409810 NEIL2Q969S2 332 aa10.42□□□□□ -0.74
CHMP3-205ENST00000409810 NXNL1Q96CM4 212 aa10.42□□□□□ -0.74
CHMP3-205ENST00000409810 MVB12AQ96EY5 273 aa10.42□□□□□ -0.74
CHMP3-205ENST00000409810 CRELD1Q96HD1 420 aa10.42□□□□□ -0.74
CHMP3-205ENST00000409810 OR2A5Q96R48 311 aa10.42□□□□□ -0.74
CHMP3-205ENST00000409810 OR4K3Q96R72 315 aa10.42□□□□□ -0.74
CHMP3-205ENST00000409810 AIF1LQ9BQI0 150 aa10.42□□□□□ -0.74
CHMP3-205ENST00000409810 STARD5Q9NSY2 213 aa10.42□□□□□ -0.74
CHMP3-205ENST00000409810 DNAJC11Q9NVH1 559 aa10.42□□□□□ -0.74
CHMP3-205ENST00000409810 GPRC5BQ9NZH0 403 aa10.42□□□□□ -0.74
CHMP3-205ENST00000409810 IFT80Q9P2H3 777 aaPredicted RBP10.42□□□□□ -0.74
CHMP3-205ENST00000409810 IL17BQ9UHF5 180 aa10.42□□□□□ -0.74
CHMP3-205ENST00000409810 TMCO1Q9UM00 188 aa10.42□□□□□ -0.74
CHMP3-205ENST00000409810 CDC14AQ9UNH5 594 aa10.42□□□□□ -0.74
CHMP3-205ENST00000409810 SLC22A14Q9Y267 594 aa10.42□□□□□ -0.74
CHMP3-205ENST00000409810 FARSAQ9Y285 508 aaKnown RBP10.42□□□□□ -0.74
CHMP3-205ENST00000409810 MGAQ8IWI9 3026 aa10.42□□□□□ -0.74
CHMP3-205ENST00000409810 TRBC2A0A5B9 178 aa10.41□□□□□ -0.74
CHMP3-205ENST00000409810 TERTO14746 1132 aaKnown RBP10.41□□□□□ -0.74
CHMP3-205ENST00000409810 CLGNO14967 610 aa10.41□□□□□ -0.74
CHMP3-205ENST00000409810 H2AFYO75367 372 aaKnown RBP10.41□□□□□ -0.74
CHMP3-205ENST00000409810 CREG1O75629 220 aa10.41□□□□□ -0.74
CHMP3-205ENST00000409810 ITGB2P05107 769 aa10.41□□□□□ -0.74
CHMP3-205ENST00000409810 TUBBP07437 444 aa10.41□□□□□ -0.74
CHMP3-205ENST00000409810 CTSBP07858 339 aa10.41□□□□□ -0.74
CHMP3-205ENST00000409810 SLC35G6P0C7Q6 338 aa10.41□□□□□ -0.74
CHMP3-205ENST00000409810 WT1P19544 449 aaPredicted RBP10.41□□□□□ -0.74
CHMP3-205ENST00000409810 F8A1P23610 371 aa10.41□□□□□ -0.74
CHMP3-205ENST00000409810 DEKP35659 375 aaKnown RBP10.41□□□□□ -0.74
CHMP3-205ENST00000409810 GGT5P36269 586 aa10.41□□□□□ -0.74
CHMP3-205ENST00000409810 GCGRP47871 477 aa10.41□□□□□ -0.74
CHMP3-205ENST00000409810 GLRBP48167 497 aa10.41□□□□□ -0.74
CHMP3-205ENST00000409810 HSPA7P48741 367 aa10.41□□□□□ -0.74
CHMP3-205ENST00000409810 VSNL1P62760 191 aa10.41□□□□□ -0.74
CHMP3-205ENST00000409810 IRF9Q00978 393 aa10.41□□□□□ -0.74
CHMP3-205ENST00000409810 CDC20Q12834 499 aa10.41□□□□□ -0.74
CHMP3-205ENST00000409810 DLG1Q12959 904 aa10.41□□□□□ -0.74
CHMP3-205ENST00000409810 ZXDCQ2QGD7 858 aaPredicted RBP10.41□□□□□ -0.74
CHMP3-205ENST00000409810 PRTGQ2VWP7 1150 aa10.41□□□□□ -0.74
CHMP3-205ENST00000409810 NKAIN1Q4KMZ8 207 aa10.41□□□□□ -0.74
CHMP3-205ENST00000409810 WDR93Q6P2C0 686 aa10.41□□□□□ -0.74
CHMP3-205ENST00000409810 PRMT9Q6P2P2 845 aa10.41□□□□□ -0.74
CHMP3-205ENST00000409810 C16orf46Q6P387 395 aa10.41□□□□□ -0.74
CHMP3-205ENST00000409810 EMBQ6PCB8 327 aa10.41□□□□□ -0.74
CHMP3-205ENST00000409810 FAM199XQ6PEV8 388 aaPredicted RBP10.41□□□□□ -0.74
CHMP3-205ENST00000409810 NXPE4Q6UWF7 544 aa10.41□□□□□ -0.74
CHMP3-205ENST00000409810 FAM198BQ6UWH4 519 aa10.41□□□□□ -0.74
CHMP3-205ENST00000409810 TIFABQ6ZNK6 161 aa10.41□□□□□ -0.74
CHMP3-205ENST00000409810 ASPGQ86U10 573 aa10.41□□□□□ -0.74
CHMP3-205ENST00000409810 PLD3Q8IV08 490 aa10.41□□□□□ -0.74
CHMP3-205ENST00000409810 ENDOVQ8N8Q3 282 aaKnown RBP10.41□□□□□ -0.74
CHMP3-205ENST00000409810 MFSD9Q8NBP5 474 aa10.41□□□□□ -0.74
CHMP3-205ENST00000409810 FKBP10Q96AY3 582 aa10.41□□□□□ -0.74
CHMP3-205ENST00000409810 UBL7Q96S82 380 aaPredicted RBP10.41□□□□□ -0.74
CHMP3-205ENST00000409810 ATOH8Q96SQ7 321 aa10.41□□□□□ -0.74
CHMP3-205ENST00000409810 TMEM79Q9BSE2 394 aa10.41□□□□□ -0.74
CHMP3-205ENST00000409810 SARGQ9BW04 601 aa10.41□□□□□ -0.74
CHMP3-205ENST00000409810 EPB41L4BQ9H329 900 aa10.41□□□□□ -0.74
CHMP3-205ENST00000409810 ACTL8Q9H568 366 aa10.41□□□□□ -0.74
CHMP3-205ENST00000409810 PTBP2Q9UKA9 531 aaKnown RBP10.41□□□□□ -0.74
CHMP3-205ENST00000409810 SH2B3Q9UQQ2 575 aa10.41□□□□□ -0.74
CHMP3-205ENST00000409810 RUVBL1Q9Y265 456 aaKnown RBP10.41□□□□□ -0.74
CHMP3-205ENST00000409810 MRPS18BQ9Y676 258 aaKnown RBP10.41□□□□□ -0.74
CHMP3-205ENST00000409810 SCN3AQ9NY46 2000 aa10.41□□□□□ -0.74
CHMP3-205ENST00000409810 FEZF1A0PJY2 475 aa10.4□□□□□ -0.74
CHMP3-205ENST00000409810 ERVH48-1M5A8F1 160 aa10.4□□□□□ -0.74
CHMP3-205ENST00000409810 UBXN8O00124 270 aa10.4□□□□□ -0.74
CHMP3-205ENST00000409810 TAPBPO15533 448 aa10.4□□□□□ -0.74
CHMP3-205ENST00000409810 OR1F1O43749 312 aa10.4□□□□□ -0.74
CHMP3-205ENST00000409810 CCNT2O60583 730 aaKnown RBP10.4□□□□□ -0.74
CHMP3-205ENST00000409810 ALBP02768 609 aa10.4□□□□□ -0.74
CHMP3-205ENST00000409810 PRKAR1AP10644 381 aa10.4□□□□□ -0.74
CHMP3-205ENST00000409810 GFAPP14136 432 aa10.4□□□□□ -0.74
CHMP3-205ENST00000409810 GSTM2P28161 218 aa10.4□□□□□ -0.74
CHMP3-205ENST00000409810 GCAP28676 217 aa10.4□□□□□ -0.74
CHMP3-205ENST00000409810 AHRP35869 848 aa10.4□□□□□ -0.74
CHMP3-205ENST00000409810 SKP1P63208 163 aa10.4□□□□□ -0.74
CHMP3-205ENST00000409810 REEP5Q00765 189 aa10.4□□□□□ -0.74
CHMP3-205ENST00000409810 RGS1Q08116 209 aa10.4□□□□□ -0.74
CHMP3-205ENST00000409810 FAM53BQ14153 422 aa10.4□□□□□ -0.74
CHMP3-205ENST00000409810 PDK4Q16654 411 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms