RNA–Protein interactions for RNA: ENST00000409402.8

SPIRE1-202, Transcript of spire type actin nucleation factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPIRE1, Length 5,665 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIRE1-202ENST00000409402 UFD1Q92890 307 aa24.35■■□□□ 1.49
SPIRE1-202ENST00000409402 HAVCR1Q96D42 359 aa24.35■■□□□ 1.49
SPIRE1-202ENST00000409402 TSGA13Q96PP4 275 aa24.35■■□□□ 1.49
SPIRE1-202ENST00000409402 SUSD1Q6UWL2 747 aa24.35■■□□□ 1.49
SPIRE1-202ENST00000409402 OR51B5Q9H339 312 aa24.35■■□□□ 1.49
SPIRE1-202ENST00000409402 DKKL1Q9UK85 242 aa24.35■■□□□ 1.49
SPIRE1-202ENST00000409402 GATBO75879 557 aaKnown RBP24.34■■□□□ 1.49
SPIRE1-202ENST00000409402 DHFRP00374 187 aa24.34■■□□□ 1.49
SPIRE1-202ENST00000409402 VBP1P61758 197 aa24.34■■□□□ 1.49
SPIRE1-202ENST00000409402 IL18R1Q13478 541 aa24.34■■□□□ 1.49
SPIRE1-202ENST00000409402 DHCR24Q15392 516 aa24.34■■□□□ 1.49
SPIRE1-202ENST00000409402 SLC5A9Q2M3M2 681 aa24.34■■□□□ 1.49
SPIRE1-202ENST00000409402 DPY19L3Q6ZPD9 716 aa24.34■■□□□ 1.49
SPIRE1-202ENST00000409402 C2CD4AQ8NCU7 369 aaPredicted RBP24.34■■□□□ 1.49
SPIRE1-202ENST00000409402 ZNF572Q7Z3I7 529 aaPredicted RBP24.34■■□□□ 1.49
SPIRE1-202ENST00000409402 NODALQ96S42 347 aa24.34■■□□□ 1.49
SPIRE1-202ENST00000409402 EBF4Q9BQW3 602 aa24.34■■□□□ 1.49
SPIRE1-202ENST00000409402 POPDC3Q9HBV1 291 aa24.34■■□□□ 1.49
SPIRE1-202ENST00000409402 NPIPA5E9PKD4 350 aa24.34■■□□□ 1.49
SPIRE1-202ENST00000409402 OLIG2Q13516 323 aa24.34■■□□□ 1.49
SPIRE1-202ENST00000409402 SYVN1Q86TM6 617 aa24.34■■□□□ 1.49
SPIRE1-202ENST00000409402 PROKR2Q8NFJ6 384 aa24.34■■□□□ 1.49
SPIRE1-202ENST00000409402 OR52E4Q8NGH9 312 aa24.34■■□□□ 1.49
SPIRE1-202ENST00000409402 DIRAS2Q96HU8 199 aa24.34■■□□□ 1.49
SPIRE1-202ENST00000409402 LGR4Q9BXB1 951 aa24.34■■□□□ 1.49
SPIRE1-202ENST00000409402 TBC1D17Q9HA65 648 aa24.34■■□□□ 1.49
SPIRE1-202ENST00000409402 NPIPA1Q9UND3 350 aa24.34■■□□□ 1.49
SPIRE1-202ENST00000409402 RPL36Q9Y3U8 105 aaKnown RBP24.34■■□□□ 1.49
SPIRE1-202ENST00000409402 A0A075B6Q4 140 aa24.34■■□□□ 1.49
SPIRE1-202ENST00000409402 GSTM3P21266 225 aa24.34■■□□□ 1.49
SPIRE1-202ENST00000409402 ELAVL3Q14576 367 aaKnown RBP24.34■■□□□ 1.49
SPIRE1-202ENST00000409402 KLHL26Q53HC5 615 aa24.34■■□□□ 1.49
SPIRE1-202ENST00000409402 OR5M3Q8NGP4 307 aa24.34■■□□□ 1.49
SPIRE1-202ENST00000409402 NSUN3Q9H649 340 aaKnown RBP24.34■■□□□ 1.49
SPIRE1-202ENST00000409402 IFT46Q9NQC8 304 aa24.34■■□□□ 1.49
SPIRE1-202ENST00000409402 XKP51811 444 aa24.33■■□□□ 1.49
SPIRE1-202ENST00000409402 ZNF41P51814 821 aaPredicted RBP24.33■■□□□ 1.49
SPIRE1-202ENST00000409402 RUNX3Q13761 415 aa24.33■■□□□ 1.49
SPIRE1-202ENST00000409402 GLYATL1Q969I3 302 aa24.33■■□□□ 1.49
SPIRE1-202ENST00000409402 XYLT2Q9H1B5 865 aa24.33■■□□□ 1.49
SPIRE1-202ENST00000409402 TRPV5Q9NQA5 729 aa24.33■■□□□ 1.49
SPIRE1-202ENST00000409402 PSMD9O00233 223 aa24.33■■□□□ 1.49
SPIRE1-202ENST00000409402 WRBO00258 174 aa24.33■■□□□ 1.49
SPIRE1-202ENST00000409402 AP3S2P59780 193 aa24.33■■□□□ 1.49
SPIRE1-202ENST00000409402 ADNP2Q6IQ32 1131 aa24.33■■□□□ 1.49
SPIRE1-202ENST00000409402 GHDCQ8N2G8 530 aa24.33■■□□□ 1.49
SPIRE1-202ENST00000409402 LRRC58Q96CX6 371 aa24.33■■□□□ 1.49
SPIRE1-202ENST00000409402 CGREF1Q99674 301 aa24.33■■□□□ 1.49
SPIRE1-202ENST00000409402 PTGES2Q9H7Z7 377 aa24.33■■□□□ 1.49
SPIRE1-202ENST00000409402 TACSTD2P09758 323 aa24.33■■□□□ 1.49
SPIRE1-202ENST00000409402 GMFBP60983 142 aa24.33■■□□□ 1.49
SPIRE1-202ENST00000409402 RTP2Q5QGT7 225 aa24.33■■□□□ 1.49
SPIRE1-202ENST00000409402 GALNTL5Q7Z4T8 443 aa24.33■■□□□ 1.49
SPIRE1-202ENST00000409402 CHERPQ8IWX8 916 aaKnown RBP24.33■■□□□ 1.49
SPIRE1-202ENST00000409402 NKIRAS2Q9NYR9 191 aa24.33■■□□□ 1.49
SPIRE1-202ENST00000409402 PDE10AQ9Y233 779 aa24.33■■□□□ 1.49
SPIRE1-202ENST00000409402 TEX264Q9Y6I9 313 aa24.33■■□□□ 1.49
SPIRE1-202ENST00000409402 CCT3P49368 545 aaKnown RBP24.33■■□□□ 1.48
SPIRE1-202ENST00000409402 STARP49675 285 aa24.33■■□□□ 1.48
SPIRE1-202ENST00000409402 KCTD8Q6ZWB6 473 aa24.33■■□□□ 1.48
SPIRE1-202ENST00000409402 AMIGO1Q86WK6 493 aa24.33■■□□□ 1.48
SPIRE1-202ENST00000409402 CCDC54Q8NEL0 328 aa24.33■■□□□ 1.48
SPIRE1-202ENST00000409402 MGME1Q9BQP7 344 aa24.33■■□□□ 1.48
SPIRE1-202ENST00000409402 NOBOXO60393 691 aa24.33■■□□□ 1.48
SPIRE1-202ENST00000409402 GP1BBP13224 206 aa24.33■■□□□ 1.48
SPIRE1-202ENST00000409402 CHCHD6Q9BRQ6 235 aa24.33■■□□□ 1.48
SPIRE1-202ENST00000409402 MBD2Q9UBB5 411 aa24.33■■□□□ 1.48
SPIRE1-202ENST00000409402 RNF11Q9Y3C5 154 aa24.33■■□□□ 1.48
SPIRE1-202ENST00000409402 NPC1O15118 1278 aa24.32■■□□□ 1.48
SPIRE1-202ENST00000409402 ITM2AO43736 263 aa24.32■■□□□ 1.48
SPIRE1-202ENST00000409402 C8orf89P0DMQ9 161 aa24.32■■□□□ 1.48
SPIRE1-202ENST00000409402 RPS6KA3P51812 740 aa24.32■■□□□ 1.48
SPIRE1-202ENST00000409402 IRF5Q13568 498 aa24.32■■□□□ 1.48
SPIRE1-202ENST00000409402 GPR153Q6NV75 609 aa24.32■■□□□ 1.48
SPIRE1-202ENST00000409402 ZNF852Q6ZMS4 543 aa24.32■■□□□ 1.48
SPIRE1-202ENST00000409402 PHOSPHO1Q8TCT1 267 aa24.32■■□□□ 1.48
SPIRE1-202ENST00000409402 FAM120CQ9NX05 1096 aaKnown RBP24.32■■□□□ 1.48
SPIRE1-202ENST00000409402 A0A1W2PQU0 124 aa24.32■■□□□ 1.48
SPIRE1-202ENST00000409402 UMODL1-AS1Q8N2C9 162 aa24.32■■□□□ 1.48
SPIRE1-202ENST00000409402 TGM5O43548 720 aa24.32■■□□□ 1.48
SPIRE1-202ENST00000409402 TRMUO75648 421 aaKnown RBP24.32■■□□□ 1.48
SPIRE1-202ENST00000409402 STC2O76061 302 aa24.32■■□□□ 1.48
SPIRE1-202ENST00000409402 CREB1P16220 341 aa24.32■■□□□ 1.48
SPIRE1-202ENST00000409402 SLC6A9P48067 706 aa24.32■■□□□ 1.48
SPIRE1-202ENST00000409402 COLEC12Q5KU26 742 aa24.32■■□□□ 1.48
SPIRE1-202ENST00000409402 MORN1Q5T089 497 aa24.32■■□□□ 1.48
SPIRE1-202ENST00000409402 ZBTB46Q86UZ6 589 aa24.32■■□□□ 1.48
SPIRE1-202ENST00000409402 ASPNQ9BXN1 380 aa24.32■■□□□ 1.48
SPIRE1-202ENST00000409402 CEACAM20Q6UY09 585 aa24.32■■□□□ 1.48
SPIRE1-202ENST00000409402 SATL1Q86VE3 508 aa24.32■■□□□ 1.48
SPIRE1-202ENST00000409402 H1F0P07305 194 aaKnown RBP24.31■■□□□ 1.48
SPIRE1-202ENST00000409402 HSD11B1P28845 292 aa24.31■■□□□ 1.48
SPIRE1-202ENST00000409402 GBX2P52951 348 aaPredicted RBP24.31■■□□□ 1.48
SPIRE1-202ENST00000409402 TGFBIQ15582 683 aa24.31■■□□□ 1.48
SPIRE1-202ENST00000409402 TMEM198Q66K66 360 aa24.31■■□□□ 1.48
SPIRE1-202ENST00000409402 BTN3A3O00478 584 aa24.31■■□□□ 1.48
SPIRE1-202ENST00000409402 RFPL2O75678 378 aa24.31■■□□□ 1.48
SPIRE1-202ENST00000409402 SNX4O95219 450 aa24.31■■□□□ 1.48
SPIRE1-202ENST00000409402 HRH2P25021 359 aa24.31■■□□□ 1.48
SPIRE1-202ENST00000409402 CDK6Q00534 326 aa24.31■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms