RNA–Protein interactions for RNA: ENST00000409323.1

CHRNA1-204, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 1 (best) BASIC

Gene CHRNA1, Length 1,585 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-204ENST00000409323 LCP2Q13094 533 aa13.52□□□□□ -0.25
CHRNA1-204ENST00000409323 DDX39BQ13838 428 aaKnown RBP13.52□□□□□ -0.25
CHRNA1-204ENST00000409323 CDCP2Q5VXM1 449 aa13.52□□□□□ -0.25
CHRNA1-204ENST00000409323 ATG9BQ674R7 924 aa13.52□□□□□ -0.25
CHRNA1-204ENST00000409323 FBXO42Q6P3S6 717 aa13.52□□□□□ -0.25
CHRNA1-204ENST00000409323 GPRIN3Q6ZVF9 776 aa13.52□□□□□ -0.25
CHRNA1-204ENST00000409323 PRSS42Q7Z5A4 293 aa13.52□□□□□ -0.25
CHRNA1-204ENST00000409323 ARHGAP22Q7Z5H3 698 aa13.52□□□□□ -0.25
CHRNA1-204ENST00000409323 CUZD1Q86UP6 607 aa13.52□□□□□ -0.25
CHRNA1-204ENST00000409323 OR4N4Q8N0Y3 316 aa13.52□□□□□ -0.25
CHRNA1-204ENST00000409323 CHCHD4Q8N4Q1 142 aa13.52□□□□□ -0.25
CHRNA1-204ENST00000409323 ABHD11Q8NFV4 315 aa13.52□□□□□ -0.25
CHRNA1-204ENST00000409323 OR6Y1Q8NGX8 325 aa13.52□□□□□ -0.25
CHRNA1-204ENST00000409323 AGAP11Q8TF27 550 aa13.52□□□□□ -0.25
CHRNA1-204ENST00000409323 CNDP1Q96KN2 507 aa13.52□□□□□ -0.25
CHRNA1-204ENST00000409323 CD180Q99467 661 aa13.52□□□□□ -0.25
CHRNA1-204ENST00000409323 RTKNQ9BST9 563 aa13.52□□□□□ -0.25
CHRNA1-204ENST00000409323 ZNF768Q9H5H4 540 aaKnown RBP13.52□□□□□ -0.25
CHRNA1-204ENST00000409323 SLCO1B3Q9NPD5 702 aa13.52□□□□□ -0.25
CHRNA1-204ENST00000409323 FARSBQ9NSD9 589 aaKnown RBP13.52□□□□□ -0.25
CHRNA1-204ENST00000409323 TMEM184CQ9NVA4 438 aa13.52□□□□□ -0.25
CHRNA1-204ENST00000409323 CLCA2Q9UQC9 943 aa13.52□□□□□ -0.25
CHRNA1-204ENST00000409323 NPHS1O60500 1241 aa13.51□□□□□ -0.25
CHRNA1-204ENST00000409323 WFS1O76024 890 aa13.51□□□□□ -0.25
CHRNA1-204ENST00000409323 DKK1O94907 266 aa13.51□□□□□ -0.25
CHRNA1-204ENST00000409323 CLDN9O95484 217 aa13.51□□□□□ -0.25
CHRNA1-204ENST00000409323 MLYCDO95822 493 aa13.51□□□□□ -0.25
CHRNA1-204ENST00000409323 OTCP00480 354 aa13.51□□□□□ -0.25
CHRNA1-204ENST00000409323 EIF2S1P05198 315 aaKnown RBP13.51□□□□□ -0.25
CHRNA1-204ENST00000409323 CAPN1P07384 714 aa13.51□□□□□ -0.25
CHRNA1-204ENST00000409323 CCL4P13236 92 aa13.51□□□□□ -0.25
CHRNA1-204ENST00000409323 ITIH1P19827 911 aa13.51□□□□□ -0.25
CHRNA1-204ENST00000409323 HTR6P50406 440 aa13.51□□□□□ -0.25
CHRNA1-204ENST00000409323 REEP5Q00765 189 aa13.51□□□□□ -0.25
CHRNA1-204ENST00000409323 FOXM1Q08050 763 aa13.51□□□□□ -0.25
CHRNA1-204ENST00000409323 ISXQ2M1V0 245 aa13.51□□□□□ -0.25
CHRNA1-204ENST00000409323 SH2D4BQ5SQS7 431 aa13.51□□□□□ -0.25
CHRNA1-204ENST00000409323 PRAMEF17Q5VTA0 474 aa13.51□□□□□ -0.25
CHRNA1-204ENST00000409323 FAM47EQ6ZV65 393 aa13.51□□□□□ -0.25
CHRNA1-204ENST00000409323 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.51□□□□□ -0.25
CHRNA1-204ENST00000409323 ZNF781Q8N8C0 355 aa13.51□□□□□ -0.25
CHRNA1-204ENST00000409323 ANKRD53Q8N9V6 530 aa13.51□□□□□ -0.25
CHRNA1-204ENST00000409323 LRRC8CQ8TDW0 803 aa13.51□□□□□ -0.25
CHRNA1-204ENST00000409323 CKAP2Q8WWK9 683 aa13.51□□□□□ -0.25
CHRNA1-204ENST00000409323 CCT6BQ92526 530 aa13.51□□□□□ -0.25
CHRNA1-204ENST00000409323 PTCD3Q96EY7 689 aaKnown RBP13.51□□□□□ -0.25
CHRNA1-204ENST00000409323 ZNF382Q96SR6 550 aa13.51□□□□□ -0.25
CHRNA1-204ENST00000409323 SORT1Q99523 831 aa13.51□□□□□ -0.25
CHRNA1-204ENST00000409323 CTRCQ99895 268 aa13.51□□□□□ -0.25
CHRNA1-204ENST00000409323 AIF1LQ9BQI0 150 aa13.51□□□□□ -0.25
CHRNA1-204ENST00000409323 DRC3Q9H069 523 aa13.51□□□□□ -0.25
CHRNA1-204ENST00000409323 PELI2Q9HAT8 420 aa13.51□□□□□ -0.25
CHRNA1-204ENST00000409323 PDE7BQ9NP56 450 aa13.51□□□□□ -0.25
CHRNA1-204ENST00000409323 PDP2Q9P2J9 529 aa13.51□□□□□ -0.25
CHRNA1-204ENST00000409323 MARCOQ9UEW3 520 aaPredicted RBP13.51□□□□□ -0.25
CHRNA1-204ENST00000409323 ZDHHC2Q9UIJ5 367 aa13.51□□□□□ -0.25
CHRNA1-204ENST00000409323 ZNF490Q9ULM2 529 aaPredicted RBP13.51□□□□□ -0.25
CHRNA1-204ENST00000409323 SNX7Q9UNH6 387 aa13.51□□□□□ -0.25
CHRNA1-204ENST00000409323 PTGDR2Q9Y5Y4 395 aa13.51□□□□□ -0.25
CHRNA1-204ENST00000409323 DCHS1Q96JQ0 3298 aa13.51□□□□□ -0.25
CHRNA1-204ENST00000409323 SPTBN2O15020 2390 aa13.51□□□□□ -0.25
CHRNA1-204ENST00000409323 KCNE1BA0A087WTH5 132 aa13.5□□□□□ -0.25
CHRNA1-204ENST00000409323 EFCAB7A8K855 629 aa13.5□□□□□ -0.25
CHRNA1-204ENST00000409323 CRCPO75575 148 aa13.5□□□□□ -0.25
CHRNA1-204ENST00000409323 KITP10721 976 aa13.5□□□□□ -0.25
CHRNA1-204ENST00000409323 NELFEP18615 380 aaKnown RBP13.5□□□□□ -0.25
CHRNA1-204ENST00000409323 VSX2P58304 361 aaPredicted RBP13.5□□□□□ -0.25
CHRNA1-204ENST00000409323 SNRPNP63162 240 aaKnown RBP13.5□□□□□ -0.25
CHRNA1-204ENST00000409323 HSD11B2P80365 405 aa13.5□□□□□ -0.25
CHRNA1-204ENST00000409323 SF3A3Q12874 501 aaKnown RBP eCLIP13.5□□□□□ -0.25
CHRNA1-204ENST00000409323 TARDBPQ13148 414 aaKnown RBP eCLIP13.5□□□□□ -0.25
CHRNA1-204ENST00000409323 ZRSR2Q15696 482 aaKnown RBP13.5□□□□□ -0.25
CHRNA1-204ENST00000409323 METTL2BQ6P1Q9 378 aaKnown RBP13.5□□□□□ -0.25
CHRNA1-204ENST00000409323 OR4K1Q8NGD4 311 aa13.5□□□□□ -0.25
CHRNA1-204ENST00000409323 KLHL6Q8WZ60 621 aa13.5□□□□□ -0.25
CHRNA1-204ENST00000409323 PMEPA1Q969W9 287 aa13.5□□□□□ -0.25
CHRNA1-204ENST00000409323 ZUFSPQ96AP4 578 aa13.5□□□□□ -0.25
CHRNA1-204ENST00000409323 TCTN2Q96GX1 697 aa13.5□□□□□ -0.25
CHRNA1-204ENST00000409323 SLC41A2Q96JW4 573 aa13.5□□□□□ -0.25
CHRNA1-204ENST00000409323 PPP1R36Q96LQ0 422 aa13.5□□□□□ -0.25
CHRNA1-204ENST00000409323 TMEM74Q96NL1 305 aa13.5□□□□□ -0.25
CHRNA1-204ENST00000409323 MTERF1Q99551 399 aaKnown RBP13.5□□□□□ -0.25
CHRNA1-204ENST00000409323 NTMT1Q9BV86 223 aa13.5□□□□□ -0.25
CHRNA1-204ENST00000409323 CAPS2Q9BXY5 557 aa13.5□□□□□ -0.25
CHRNA1-204ENST00000409323 APMAPQ9HDC9 416 aa13.5□□□□□ -0.25
CHRNA1-204ENST00000409323 IRAK4Q9NWZ3 460 aa13.5□□□□□ -0.25
CHRNA1-204ENST00000409323 PILRAQ9UKJ1 303 aa13.5□□□□□ -0.25
CHRNA1-204ENST00000409323 BTRCQ9Y297 605 aa13.5□□□□□ -0.25
CHRNA1-204ENST00000409323 SCN3AQ9NY46 2000 aa13.5□□□□□ -0.25
CHRNA1-204ENST00000409323 KNTC1P50748 2209 aa13.5□□□□□ -0.25
CHRNA1-204ENST00000409323 A0A1W2PNU3 283 aaPredicted RBP13.49□□□□□ -0.25
CHRNA1-204ENST00000409323 TMEM150CB9EJG8 249 aa13.49□□□□□ -0.25
CHRNA1-204ENST00000409323 H0YGG7 62 aa13.49□□□□□ -0.25
CHRNA1-204ENST00000409323 P2RX6O15547 441 aa13.49□□□□□ -0.25
CHRNA1-204ENST00000409323 H2AFYO75367 372 aaKnown RBP13.49□□□□□ -0.25
CHRNA1-204ENST00000409323 ESRRBO95718 433 aa13.49□□□□□ -0.25
CHRNA1-204ENST00000409323 JUPP14923 745 aa13.49□□□□□ -0.25
CHRNA1-204ENST00000409323 CSTF2P33240 577 aaKnown RBP eCLIP13.49□□□□□ -0.25
CHRNA1-204ENST00000409323 GRK3P35626 688 aa13.49□□□□□ -0.25
CHRNA1-204ENST00000409323 HNF4AP41235 474 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms