RNA–Protein interactions for RNA: ENST00000409248.8

C4orf48-201, Transcript of chromosome 4 open reading frame 48, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene C4orf48, Length 433 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf48-201ENST00000409248 PTCHD3Q3KNS1 767 aa19.92■□□□□ 0.78
C4orf48-201ENST00000409248 PRAMEF13Q5VWM6 474 aa19.92■□□□□ 0.78
C4orf48-201ENST00000409248 ICE2Q659A1 982 aa19.92■□□□□ 0.78
C4orf48-201ENST00000409248 TLDC1Q6P9B6 456 aa19.92■□□□□ 0.78
C4orf48-201ENST00000409248 UBTD2Q8WUN7 234 aa19.92■□□□□ 0.78
C4orf48-201ENST00000409248 ARL8AQ96BM9 186 aa19.92■□□□□ 0.78
C4orf48-201ENST00000409248 ATP6V1G3Q96LB4 118 aa19.92■□□□□ 0.78
C4orf48-201ENST00000409248 SGPP1Q9BX95 441 aa19.92■□□□□ 0.78
C4orf48-201ENST00000409248 LHX9Q9NQ69 397 aa19.92■□□□□ 0.78
C4orf48-201ENST00000409248 ABCF3Q9NUQ8 709 aa19.92■□□□□ 0.78
C4orf48-201ENST00000409248 SRPK3Q9UPE1 567 aa19.92■□□□□ 0.78
C4orf48-201ENST00000409248 LOC101059948A0A1B0GTJ6 334 aa19.91■□□□□ 0.78
C4orf48-201ENST00000409248 ZNF891A8MT65 544 aaPredicted RBP19.91■□□□□ 0.78
C4orf48-201ENST00000409248 SBK3P0C264 359 aa19.91■□□□□ 0.78
C4orf48-201ENST00000409248 ATP5F1P24539 256 aaPredicted RBP19.91■□□□□ 0.78
C4orf48-201ENST00000409248 GGT5P36269 586 aa19.91■□□□□ 0.78
C4orf48-201ENST00000409248 DLSTP36957 453 aa19.91■□□□□ 0.78
C4orf48-201ENST00000409248 SETDB1Q15047 1291 aa19.91■□□□□ 0.78
C4orf48-201ENST00000409248 FCRL6Q6DN72 434 aa19.91■□□□□ 0.78
C4orf48-201ENST00000409248 MCATQ8IVS2 390 aaKnown RBP19.91■□□□□ 0.78
C4orf48-201ENST00000409248 TMEM151AQ8N4L1 468 aa19.91■□□□□ 0.78
C4orf48-201ENST00000409248 PTGR2Q8N8N7 351 aaPredicted RBP19.91■□□□□ 0.78
C4orf48-201ENST00000409248 RDH11Q8TC12 318 aa19.91■□□□□ 0.78
C4orf48-201ENST00000409248 TCP10LQ8TDR4 215 aa19.91■□□□□ 0.78
C4orf48-201ENST00000409248 PYCR2Q96C36 320 aa19.91■□□□□ 0.78
C4orf48-201ENST00000409248 SLC45A3Q96JT2 553 aa19.91■□□□□ 0.78
C4orf48-201ENST00000409248 TMEM79Q9BSE2 394 aa19.91■□□□□ 0.78
C4orf48-201ENST00000409248 DPH7Q9BTV6 452 aa19.91■□□□□ 0.78
C4orf48-201ENST00000409248 KCNK9Q9NPC2 374 aa19.91■□□□□ 0.78
C4orf48-201ENST00000409248 KCND3Q9UK17 655 aa19.91■□□□□ 0.78
C4orf48-201ENST00000409248 CROTQ9UKG9 612 aa19.91■□□□□ 0.78
C4orf48-201ENST00000409248 TNPO3Q9Y5L0 923 aaKnown RBP19.91■□□□□ 0.78
C4orf48-201ENST00000409248 ITPR1Q14643 2758 aa19.91■□□□□ 0.78
C4orf48-201ENST00000409248 HMGB1P1B2RPK0 211 aaPredicted RBP19.9■□□□□ 0.78
C4orf48-201ENST00000409248 C21orf140B9A014 251 aa19.9■□□□□ 0.78
C4orf48-201ENST00000409248 STX16-NPEPL1H3BU86 382 aa19.9■□□□□ 0.78
C4orf48-201ENST00000409248 STX16O14662 325 aa19.9■□□□□ 0.78
C4orf48-201ENST00000409248 TAPBPO15533 448 aa19.9■□□□□ 0.78
C4orf48-201ENST00000409248 PRPF4O43172 522 aaKnown RBP eCLIP19.9■□□□□ 0.78
C4orf48-201ENST00000409248 ZNF749O43361 778 aa19.9■□□□□ 0.78
C4orf48-201ENST00000409248 STK16O75716 305 aa19.9■□□□□ 0.78
C4orf48-201ENST00000409248 WDR47O94967 919 aa19.9■□□□□ 0.78
C4orf48-201ENST00000409248 MYL2P10916 166 aa19.9■□□□□ 0.78
C4orf48-201ENST00000409248 SLC6A12P48065 614 aa19.9■□□□□ 0.78
C4orf48-201ENST00000409248 HSPA7P48741 367 aa19.9■□□□□ 0.78
C4orf48-201ENST00000409248 MC1RQ01726 317 aa19.9■□□□□ 0.78
C4orf48-201ENST00000409248 PRDX1Q06830 199 aaKnown RBP19.9■□□□□ 0.78
C4orf48-201ENST00000409248 GPS2Q13227 327 aa19.9■□□□□ 0.78
C4orf48-201ENST00000409248 C18orf21Q32NC0 220 aaPredicted RBP19.9■□□□□ 0.78
C4orf48-201ENST00000409248 TCTE1Q5JU00 501 aa19.9■□□□□ 0.78
C4orf48-201ENST00000409248 LCTLQ6UWM7 567 aa19.9■□□□□ 0.78
C4orf48-201ENST00000409248 ZYG11AQ6WRX3 759 aa19.9■□□□□ 0.78
C4orf48-201ENST00000409248 LRRC70Q7Z2Q7 622 aa19.9■□□□□ 0.78
C4orf48-201ENST00000409248 KLHDC8AQ8IYD2 350 aa19.9■□□□□ 0.78
C4orf48-201ENST00000409248 ARMC2Q8NEN0 867 aa19.9■□□□□ 0.78
C4orf48-201ENST00000409248 MR1Q95460 341 aa19.9■□□□□ 0.78
C4orf48-201ENST00000409248 PHF21BQ96EK2 531 aa19.9■□□□□ 0.78
C4orf48-201ENST00000409248 FAM111AQ96PZ2 611 aa19.9■□□□□ 0.78
C4orf48-201ENST00000409248 DPH2Q9BQC3 489 aaPredicted RBP19.9■□□□□ 0.78
C4orf48-201ENST00000409248 SELENOSQ9BQE4 189 aa19.9■□□□□ 0.78
C4orf48-201ENST00000409248 HAUS8Q9BT25 410 aa19.9■□□□□ 0.78
C4orf48-201ENST00000409248 C12orf65Q9H3J6 166 aaKnown RBP19.9■□□□□ 0.78
C4orf48-201ENST00000409248 SLC6A20Q9NP91 592 aa19.9■□□□□ 0.78
C4orf48-201ENST00000409248 ANKRD12Q6UB98 2062 aa19.9■□□□□ 0.78
C4orf48-201ENST00000409248 OR2A25A4D2G3 310 aa19.89■□□□□ 0.77
C4orf48-201ENST00000409248 A8MT66 165 aa19.89■□□□□ 0.77
C4orf48-201ENST00000409248 TM9SF1O15321 606 aa19.89■□□□□ 0.77
C4orf48-201ENST00000409248 HCRTR1O43613 425 aa19.89■□□□□ 0.77
C4orf48-201ENST00000409248 CCNT2O60583 730 aaKnown RBP19.89■□□□□ 0.77
C4orf48-201ENST00000409248 SPTBP11277 2137 aa19.89■□□□□ 0.77
C4orf48-201ENST00000409248 RORAP35398 523 aa19.89■□□□□ 0.77
C4orf48-201ENST00000409248 NFKB2Q00653 900 aa19.89■□□□□ 0.77
C4orf48-201ENST00000409248 RHDQ02161 417 aa19.89■□□□□ 0.77
C4orf48-201ENST00000409248 DNASE1L3Q13609 305 aa19.89■□□□□ 0.77
C4orf48-201ENST00000409248 ZXDCQ2QGD7 858 aaPredicted RBP19.89■□□□□ 0.77
C4orf48-201ENST00000409248 TTMPQ5BVD1 217 aa19.89■□□□□ 0.77
C4orf48-201ENST00000409248 FBXO48Q5FWF7 155 aa19.89■□□□□ 0.77
C4orf48-201ENST00000409248 PRAMEF17Q5VTA0 474 aa19.89■□□□□ 0.77
C4orf48-201ENST00000409248 CFAP47Q6ZTR5 3102 aa19.89■□□□□ 0.77
C4orf48-201ENST00000409248 RNF44Q7L0R7 432 aa19.89■□□□□ 0.77
C4orf48-201ENST00000409248 ZFHX4Q86UP3 3567 aa19.89■□□□□ 0.77
C4orf48-201ENST00000409248 THOC6Q86W42 341 aaKnown RBP19.89■□□□□ 0.77
C4orf48-201ENST00000409248 SLC22A9Q8IVM8 553 aa19.89■□□□□ 0.77
C4orf48-201ENST00000409248 DSELQ8IZU8 1212 aa19.89■□□□□ 0.77
C4orf48-201ENST00000409248 CT55Q8WUE5 264 aa19.89■□□□□ 0.77
C4orf48-201ENST00000409248 STARD8Q92502 1023 aa19.89■□□□□ 0.77
C4orf48-201ENST00000409248 CCDC126Q96EE4 140 aa19.89■□□□□ 0.77
C4orf48-201ENST00000409248 ZFYVE21Q9BQ24 234 aa19.89■□□□□ 0.77
C4orf48-201ENST00000409248 PLCD4Q9BRC7 762 aa19.89■□□□□ 0.77
C4orf48-201ENST00000409248 NDC1Q9BTX1 674 aa19.89■□□□□ 0.77
C4orf48-201ENST00000409248 CD244Q9BZW8 370 aa19.89■□□□□ 0.77
C4orf48-201ENST00000409248 FAM117AQ9C073 453 aa19.89■□□□□ 0.77
C4orf48-201ENST00000409248 TXLNGQ9NUQ3 528 aa19.89■□□□□ 0.77
C4orf48-201ENST00000409248 DNAJC11Q9NVH1 559 aa19.89■□□□□ 0.77
C4orf48-201ENST00000409248 SLC17A7Q9P2U7 560 aa19.89■□□□□ 0.77
C4orf48-201ENST00000409248 SNX7Q9UNH6 387 aa19.89■□□□□ 0.77
C4orf48-201ENST00000409248 DYRK1BQ9Y463 629 aa19.89■□□□□ 0.77
C4orf48-201ENST00000409248 FAM208BQ5VWN6 2430 aa19.88■□□□□ 0.77
C4orf48-201ENST00000409248 LAMA5O15230 3695 aa19.88■□□□□ 0.77
C4orf48-201ENST00000409248 H3BMH7 237 aa19.88■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms