RNA–Protein interactions for RNA: ENST00000409031.5

SMPD4-202, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD4, Length 4,896 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-202ENST00000409031 MEIOCA2RUB1 952 aa17.18■□□□□ 0.34
SMPD4-202ENST00000409031 B8ZZF3 427 aa17.18■□□□□ 0.34
SMPD4-202ENST00000409031 RAB36O95755 333 aa17.18■□□□□ 0.34
SMPD4-202ENST00000409031 CASP3P42574 277 aa17.18■□□□□ 0.34
SMPD4-202ENST00000409031 NSG1P42857 185 aa17.18■□□□□ 0.34
SMPD4-202ENST00000409031 CXCR4P61073 352 aa17.18■□□□□ 0.34
SMPD4-202ENST00000409031 SDHAF4Q5VUM1 108 aa17.18■□□□□ 0.34
SMPD4-202ENST00000409031 COMMD7Q86VX2 200 aa17.18■□□□□ 0.34
SMPD4-202ENST00000409031 TMEM192Q8IY95 271 aa17.18■□□□□ 0.34
SMPD4-202ENST00000409031 RNASE11Q8TAA1 199 aaKnown RBP17.18■□□□□ 0.34
SMPD4-202ENST00000409031 STRA6Q9BX79 667 aa17.18■□□□□ 0.34
SMPD4-202ENST00000409031 CKLFQ9UBR5 152 aa17.18■□□□□ 0.34
SMPD4-202ENST00000409031 MGAT4BQ9UQ53 548 aa17.18■□□□□ 0.34
SMPD4-202ENST00000409031 POLR1DQ9Y2S0 133 aa17.18■□□□□ 0.34
SMPD4-202ENST00000409031 EXOSC1Q9Y3B2 195 aaKnown RBP17.18■□□□□ 0.34
SMPD4-202ENST00000409031 RNF11Q9Y3C5 154 aa17.18■□□□□ 0.34
SMPD4-202ENST00000409031 ZNF780BQ9Y6R6 833 aa17.18■□□□□ 0.34
SMPD4-202ENST00000409031 A0A1W2PRB8 838 aa17.18■□□□□ 0.34
SMPD4-202ENST00000409031 SMIM10L2AP0DMW4 78 aa17.18■□□□□ 0.34
SMPD4-202ENST00000409031 SMIM10L2BP0DMW5 78 aa17.18■□□□□ 0.34
SMPD4-202ENST00000409031 DPEP1P16444 411 aa17.18■□□□□ 0.34
SMPD4-202ENST00000409031 ITGA3P26006 1051 aa17.18■□□□□ 0.34
SMPD4-202ENST00000409031 RAB2AP61019 212 aa17.18■□□□□ 0.34
SMPD4-202ENST00000409031 GRSF1Q12849 480 aaKnown RBP eCLIP17.18■□□□□ 0.34
SMPD4-202ENST00000409031 FADDQ13158 208 aa17.18■□□□□ 0.34
SMPD4-202ENST00000409031 ZNF630Q2M218 657 aaPredicted RBP17.18■□□□□ 0.34
SMPD4-202ENST00000409031 TCEANCQ8N8B7 351 aa17.18■□□□□ 0.34
SMPD4-202ENST00000409031 C12orf66Q96MD2 445 aa17.18■□□□□ 0.34
SMPD4-202ENST00000409031 MTERF1Q99551 399 aaKnown RBP17.18■□□□□ 0.34
SMPD4-202ENST00000409031 ADAM2Q99965 735 aa17.18■□□□□ 0.34
SMPD4-202ENST00000409031 AIF1LQ9BQI0 150 aa17.18■□□□□ 0.34
SMPD4-202ENST00000409031 SLC35A5Q9BS91 424 aa17.18■□□□□ 0.34
SMPD4-202ENST00000409031 TREM1Q9NP99 234 aa17.18■□□□□ 0.34
SMPD4-202ENST00000409031 TMEM45AQ9NWC5 275 aa17.18■□□□□ 0.34
SMPD4-202ENST00000409031 QPCTLQ9NXS2 382 aa17.18■□□□□ 0.34
SMPD4-202ENST00000409031 MYBPHLA2RUH7 354 aa17.18■□□□□ 0.34
SMPD4-202ENST00000409031 EFR3AQ14156 821 aa17.18■□□□□ 0.34
SMPD4-202ENST00000409031 CLEC20AQ6ZU45 233 aa17.18■□□□□ 0.34
SMPD4-202ENST00000409031 UBQLNLQ8IYU4 475 aa17.18■□□□□ 0.34
SMPD4-202ENST00000409031 COQ8AQ8NI60 647 aa17.18■□□□□ 0.34
SMPD4-202ENST00000409031 DHRS1Q96LJ7 313 aa17.18■□□□□ 0.34
SMPD4-202ENST00000409031 ELAC1Q9H777 363 aaKnown RBP17.18■□□□□ 0.34
SMPD4-202ENST00000409031 TRIM36Q9NQ86 728 aa17.18■□□□□ 0.34
SMPD4-202ENST00000409031 CLCA1A8K7I4 914 aa17.18■□□□□ 0.34
SMPD4-202ENST00000409031 ZNF432O94892 652 aa17.18■□□□□ 0.34
SMPD4-202ENST00000409031 ADAM8P78325 824 aa17.18■□□□□ 0.34
SMPD4-202ENST00000409031 LIPKQ5VXJ0 399 aa17.18■□□□□ 0.34
SMPD4-202ENST00000409031 RPTNQ6XPR3 784 aa17.18■□□□□ 0.34
SMPD4-202ENST00000409031 FRRS1Q6ZNA5 592 aa17.18■□□□□ 0.34
SMPD4-202ENST00000409031 RTL4Q6ZR62 310 aa17.18■□□□□ 0.34
SMPD4-202ENST00000409031 SLC43A3Q8NBI5 491 aa17.18■□□□□ 0.34
SMPD4-202ENST00000409031 KAT2AQ92830 837 aa17.18■□□□□ 0.34
SMPD4-202ENST00000409031 TMEM125Q96AQ2 219 aa17.18■□□□□ 0.34
SMPD4-202ENST00000409031 ACBD6Q9BR61 282 aa17.18■□□□□ 0.34
SMPD4-202ENST00000409031 SLC7A5P2Q9GIP4 190 aa17.18■□□□□ 0.34
SMPD4-202ENST00000409031 C20orf27Q9GZN8 174 aa17.18■□□□□ 0.34
SMPD4-202ENST00000409031 STUB1Q9UNE7 303 aa17.18■□□□□ 0.34
SMPD4-202ENST00000409031 IQCMA0A1B0GVH7 501 aa17.17■□□□□ 0.34
SMPD4-202ENST00000409031 A8MU76 341 aa17.17■□□□□ 0.34
SMPD4-202ENST00000409031 TPST2O60704 377 aa17.17■□□□□ 0.34
SMPD4-202ENST00000409031 VIPP01282 170 aa17.17■□□□□ 0.34
SMPD4-202ENST00000409031 EMX1Q04741 257 aaPredicted RBP17.17■□□□□ 0.34
SMPD4-202ENST00000409031 FGFBP1Q14512 234 aa17.17■□□□□ 0.34
SMPD4-202ENST00000409031 GPR162Q16538 588 aa17.17■□□□□ 0.34
SMPD4-202ENST00000409031 RAB12Q6IQ22 244 aa17.17■□□□□ 0.34
SMPD4-202ENST00000409031 TTLL2Q9BWV7 592 aa17.17■□□□□ 0.34
SMPD4-202ENST00000409031 TCF7L1Q9HCS4 588 aa17.17■□□□□ 0.34
SMPD4-202ENST00000409031 NUDT15Q9NV35 164 aa17.17■□□□□ 0.34
SMPD4-202ENST00000409031 THG1LQ9NWX6 298 aaKnown RBP17.17■□□□□ 0.34
SMPD4-202ENST00000409031 CPSF4LA6NMK7 179 aaKnown RBP17.17■□□□□ 0.34
SMPD4-202ENST00000409031 CD1DP15813 335 aa17.17■□□□□ 0.34
SMPD4-202ENST00000409031 RPL10P27635 214 aaKnown RBP17.17■□□□□ 0.34
SMPD4-202ENST00000409031 BRCC3P46736 316 aa17.17■□□□□ 0.34
SMPD4-202ENST00000409031 ARCN1P48444 511 aaKnown RBP17.17■□□□□ 0.34
SMPD4-202ENST00000409031 DSTNP60981 165 aa17.17■□□□□ 0.34
SMPD4-202ENST00000409031 KEAP1Q14145 624 aa17.17■□□□□ 0.34
SMPD4-202ENST00000409031 ARL9Q6T311 187 aa17.17■□□□□ 0.34
SMPD4-202ENST00000409031 OR4C6Q8NH72 309 aa17.17■□□□□ 0.34
SMPD4-202ENST00000409031 OR51V1Q9H2C8 321 aa17.17■□□□□ 0.34
SMPD4-202ENST00000409031 NMUR1Q9HB89 426 aa17.17■□□□□ 0.34
SMPD4-202ENST00000409031 IKZF2Q9UKS7 526 aa17.17■□□□□ 0.34
SMPD4-202ENST00000409031 AGXTP21549 392 aa17.17■□□□□ 0.34
SMPD4-202ENST00000409031 OXTRP30559 389 aa17.17■□□□□ 0.34
SMPD4-202ENST00000409031 DGKGP49619 791 aa17.17■□□□□ 0.34
SMPD4-202ENST00000409031 CCR4P51679 360 aa17.17■□□□□ 0.34
SMPD4-202ENST00000409031 DSG2Q14126 1118 aa17.17■□□□□ 0.34
SMPD4-202ENST00000409031 SELPLGQ14242 412 aa17.17■□□□□ 0.34
SMPD4-202ENST00000409031 CIR1Q86X95 450 aaPredicted RBP17.17■□□□□ 0.34
SMPD4-202ENST00000409031 CHDHQ8NE62 594 aaPredicted RBP17.17■□□□□ 0.34
SMPD4-202ENST00000409031 CCDC3Q9BQI4 270 aa17.17■□□□□ 0.34
SMPD4-202ENST00000409031 FAM105AQ9NUU6 356 aa17.17■□□□□ 0.34
SMPD4-202ENST00000409031 TAS2R3Q9NYW6 316 aa17.17■□□□□ 0.34
SMPD4-202ENST00000409031 SMIM30A4D0T7 59 aa17.16■□□□□ 0.34
SMPD4-202ENST00000409031 LOC730098B7Z3J9 87 aa17.16■□□□□ 0.34
SMPD4-202ENST00000409031 PCDH7O60245 1069 aa17.16■□□□□ 0.34
SMPD4-202ENST00000409031 ENPP6Q6UWR7 440 aa17.16■□□□□ 0.34
SMPD4-202ENST00000409031 DENND6BQ8NEG7 585 aa17.16■□□□□ 0.34
SMPD4-202ENST00000409031 ZNF285Q96NJ3 590 aa17.16■□□□□ 0.34
SMPD4-202ENST00000409031 NSUN5Q96P11 429 aaKnown RBP17.16■□□□□ 0.34
SMPD4-202ENST00000409031 XYLT2Q9H1B5 865 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms