RNA–Protein interactions for RNA: ENST00000408454.1

SNORD88B-201, Transcript of small nucleolar RNA, C/D box 88B, humanhuman

BASIC

Gene SNORD88B, Length 91 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88B-201ENST00000408454 ABHD13Q7L211 337 aa12.23□□□□□ -0.45
SNORD88B-201ENST00000408454 MAATS1Q7Z4T9 603 aa12.23□□□□□ -0.45
SNORD88B-201ENST00000408454 DENND6AQ8IWF6 608 aa12.23□□□□□ -0.45
SNORD88B-201ENST00000408454 CNTN4Q8IWV2 1026 aa12.23□□□□□ -0.45
SNORD88B-201ENST00000408454 CPNE9Q8IYJ1 553 aa12.23□□□□□ -0.45
SNORD88B-201ENST00000408454 EID3Q8N140 333 aa12.23□□□□□ -0.45
SNORD88B-201ENST00000408454 SLC35F6Q8N357 371 aa12.23□□□□□ -0.45
SNORD88B-201ENST00000408454 FAM98AQ8NCA5 519 aaKnown RBP12.23□□□□□ -0.45
SNORD88B-201ENST00000408454 TTLQ8NG68 377 aa12.23□□□□□ -0.45
SNORD88B-201ENST00000408454 TSPAN17Q96FV3 270 aa12.23□□□□□ -0.45
SNORD88B-201ENST00000408454 SNF8Q96H20 258 aa12.23□□□□□ -0.45
SNORD88B-201ENST00000408454 SEC16BQ96JE7 1060 aa12.23□□□□□ -0.45
SNORD88B-201ENST00000408454 SIGLEC10Q96LC7 697 aa12.23□□□□□ -0.45
SNORD88B-201ENST00000408454 MAGEB10Q96LZ2 347 aaPredicted RBP12.23□□□□□ -0.45
SNORD88B-201ENST00000408454 OR2A5Q96R48 311 aa12.23□□□□□ -0.45
SNORD88B-201ENST00000408454 OR1F2PQ96R84 312 aa12.23□□□□□ -0.45
SNORD88B-201ENST00000408454 GRPEL1Q9HAV7 217 aa12.23□□□□□ -0.45
SNORD88B-201ENST00000408454 TSR3Q9UJK0 312 aaKnown RBP12.23□□□□□ -0.45
SNORD88B-201ENST00000408454 RUVBL2Q9Y230 463 aaKnown RBP12.23□□□□□ -0.45
SNORD88B-201ENST00000408454 RUVBL1Q9Y265 456 aaKnown RBP12.23□□□□□ -0.45
SNORD88B-201ENST00000408454 DYRK1BQ9Y463 629 aa12.23□□□□□ -0.45
SNORD88B-201ENST00000408454 PCDHGA10Q9Y5H3 936 aa12.23□□□□□ -0.45
SNORD88B-201ENST00000408454 SLC22A7Q9Y694 548 aa12.23□□□□□ -0.45
SNORD88B-201ENST00000408454 SAR1BQ9Y6B6 198 aa12.23□□□□□ -0.45
SNORD88B-201ENST00000408454 MAU2Q9Y6X3 613 aa12.23□□□□□ -0.45
SNORD88B-201ENST00000408454 ASH1LQ9NR48 2969 aaKnown RBP12.23□□□□□ -0.45
SNORD88B-201ENST00000408454 FLNBO75369 2602 aaKnown RBP12.23□□□□□ -0.45
SNORD88B-201ENST00000408454 ATXN8OSP0DMR3 200 aa12.22□□□□□ -0.45
SNORD88B-201ENST00000408454 MCM3P25205 808 aa12.22□□□□□ -0.45
SNORD88B-201ENST00000408454 TBPL1P62380 186 aa12.22□□□□□ -0.45
SNORD88B-201ENST00000408454 CSHL1Q14406 222 aa12.22□□□□□ -0.45
SNORD88B-201ENST00000408454 ANKRD22Q5VYY1 191 aa12.22□□□□□ -0.45
SNORD88B-201ENST00000408454 FBXO42Q6P3S6 717 aa12.22□□□□□ -0.45
SNORD88B-201ENST00000408454 AGTRAPQ6RW13 159 aa12.22□□□□□ -0.45
SNORD88B-201ENST00000408454 FRA10AC1Q70Z53 315 aa12.22□□□□□ -0.45
SNORD88B-201ENST00000408454 COX15Q7KZN9 410 aa12.22□□□□□ -0.45
SNORD88B-201ENST00000408454 STRA8Q7Z7C7 330 aa12.22□□□□□ -0.45
SNORD88B-201ENST00000408454 ADAMTSL2Q86TH1 951 aa12.22□□□□□ -0.45
SNORD88B-201ENST00000408454 ASPGQ86U10 573 aa12.22□□□□□ -0.45
SNORD88B-201ENST00000408454 SLC26A11Q86WA9 606 aa12.22□□□□□ -0.45
SNORD88B-201ENST00000408454 FAM20CQ8IXL6 584 aa12.22□□□□□ -0.45
SNORD88B-201ENST00000408454 PARP9Q8IXQ6 854 aa12.22□□□□□ -0.45
SNORD88B-201ENST00000408454 TCAIMQ8N3R3 496 aa12.22□□□□□ -0.45
SNORD88B-201ENST00000408454 TRPV3Q8NET8 790 aa12.22□□□□□ -0.45
SNORD88B-201ENST00000408454 DNAJB8Q8NHS0 232 aa12.22□□□□□ -0.45
SNORD88B-201ENST00000408454 PRR7Q8TB68 274 aa12.22□□□□□ -0.45
SNORD88B-201ENST00000408454 SNRNP40Q96DI7 357 aaKnown RBP12.22□□□□□ -0.45
SNORD88B-201ENST00000408454 PDLIM5Q96HC4 596 aaKnown RBP12.22□□□□□ -0.45
SNORD88B-201ENST00000408454 CNDP1Q96KN2 507 aa12.22□□□□□ -0.45
SNORD88B-201ENST00000408454 ZNF354BQ96LW1 612 aa12.22□□□□□ -0.45
SNORD88B-201ENST00000408454 NAPGQ99747 312 aaPredicted RBP12.22□□□□□ -0.45
SNORD88B-201ENST00000408454 PITHD1Q9GZP4 211 aaPredicted RBP12.22□□□□□ -0.45
SNORD88B-201ENST00000408454 CNOT10Q9H9A5 744 aaKnown RBP12.22□□□□□ -0.45
SNORD88B-201ENST00000408454 ZNF160Q9HCG1 818 aa12.22□□□□□ -0.45
SNORD88B-201ENST00000408454 SLC22A11Q9NSA0 550 aa12.22□□□□□ -0.45
SNORD88B-201ENST00000408454 ABCF3Q9NUQ8 709 aa12.22□□□□□ -0.45
SNORD88B-201ENST00000408454 STOX2Q9P2F5 926 aaPredicted RBP12.22□□□□□ -0.45
SNORD88B-201ENST00000408454 MKL2Q9ULH7 1088 aa12.22□□□□□ -0.45
SNORD88B-201ENST00000408454 NOVA2Q9UNW9 492 aaKnown RBP12.22□□□□□ -0.45
SNORD88B-201ENST00000408454 KCNE2Q9Y6J6 123 aa12.22□□□□□ -0.45
SNORD88B-201ENST00000408454 LOC105369274A0A096LPK9 316 aa12.21□□□□□ -0.45
SNORD88B-201ENST00000408454 LOC102723532A0A0G2JNH3 316 aa12.21□□□□□ -0.45
SNORD88B-201ENST00000408454 BLACEA4D250 179 aa12.21□□□□□ -0.45
SNORD88B-201ENST00000408454 TCP11X1B4DZS4 312 aa12.21□□□□□ -0.45
SNORD88B-201ENST00000408454 H7BY64 318 aa12.21□□□□□ -0.45
SNORD88B-201ENST00000408454 PSMD12O00232 456 aaPredicted RBP12.21□□□□□ -0.45
SNORD88B-201ENST00000408454 HCRTR1O43613 425 aa12.21□□□□□ -0.45
SNORD88B-201ENST00000408454 ALOX12BO75342 701 aa12.21□□□□□ -0.45
SNORD88B-201ENST00000408454 H2AFYO75367 372 aaKnown RBP12.21□□□□□ -0.45
SNORD88B-201ENST00000408454 IMPA1P29218 277 aa12.21□□□□□ -0.45
SNORD88B-201ENST00000408454 CUL1Q13616 776 aa12.21□□□□□ -0.45
SNORD88B-201ENST00000408454 FASTKQ14296 549 aaKnown RBP12.21□□□□□ -0.45
SNORD88B-201ENST00000408454 PLEKHN1Q494U1 663 aaPredicted RBP12.21□□□□□ -0.45
SNORD88B-201ENST00000408454 MINDY4Q4G0A6 757 aa12.21□□□□□ -0.45
SNORD88B-201ENST00000408454 CCSMST1Q4G0I0 132 aa12.21□□□□□ -0.45
SNORD88B-201ENST00000408454 ATG9BQ674R7 924 aa12.21□□□□□ -0.45
SNORD88B-201ENST00000408454 CEP128Q6ZU80 1094 aa12.21□□□□□ -0.45
SNORD88B-201ENST00000408454 OR4N4Q8N0Y3 316 aa12.21□□□□□ -0.45
SNORD88B-201ENST00000408454 SLC34A3Q8N130 599 aa12.21□□□□□ -0.45
SNORD88B-201ENST00000408454 CISD2Q8N5K1 135 aaKnown RBP12.21□□□□□ -0.45
SNORD88B-201ENST00000408454 SLC5A8Q8N695 610 aa12.21□□□□□ -0.45
SNORD88B-201ENST00000408454 METTL27Q8N6F8 245 aaPredicted RBP12.21□□□□□ -0.45
SNORD88B-201ENST00000408454 ADAMTS18Q8TE60 1221 aa12.21□□□□□ -0.45
SNORD88B-201ENST00000408454 SLC13A3Q8WWT9 602 aa12.21□□□□□ -0.45
SNORD88B-201ENST00000408454 HAS2Q92819 552 aa12.21□□□□□ -0.45
SNORD88B-201ENST00000408454 LINGO1Q96FE5 620 aa12.21□□□□□ -0.45
SNORD88B-201ENST00000408454 MS4A14Q96JA4 679 aa12.21□□□□□ -0.45
SNORD88B-201ENST00000408454 PRAP1Q96NZ9 151 aa12.21□□□□□ -0.45
SNORD88B-201ENST00000408454 LPAR4Q99677 370 aa12.21□□□□□ -0.45
SNORD88B-201ENST00000408454 AIF1LQ9BQI0 150 aa12.21□□□□□ -0.45
SNORD88B-201ENST00000408454 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.21□□□□□ -0.456e-8■□□□□ 9.1
SNORD88B-201ENST00000408454 ZNF700Q9H0M5 742 aa12.21□□□□□ -0.45
SNORD88B-201ENST00000408454 POPDC3Q9HBV1 291 aa12.21□□□□□ -0.45
SNORD88B-201ENST00000408454 SUCOQ9UBS9 1254 aaKnown RBP12.21□□□□□ -0.45
SNORD88B-201ENST00000408454 VWA7Q9Y334 891 aa12.21□□□□□ -0.45
SNORD88B-201ENST00000408454 NEU2Q9Y3R4 380 aa12.21□□□□□ -0.45
SNORD88B-201ENST00000408454 UBR5O95071 2799 aaPredicted RBP12.21□□□□□ -0.46
SNORD88B-201ENST00000408454 LOC102723996A0A087X1L8 192 aa12.2□□□□□ -0.46
SNORD88B-201ENST00000408454 IGHV1-45A0A0A0MS14 117 aa12.2□□□□□ -0.46
SNORD88B-201ENST00000408454 EIF3HO15372 352 aaKnown RBP eCLIP12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms