RNA–Protein interactions for RNA: ENST00000407082.3

SMARCB1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 5 BASIC

Gene SMARCB1, Length 1,182 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-203ENST00000407082 FAM83DQ9H4H8 585 aa12.5□□□□□ -0.41
SMARCB1-203ENST00000407082 PRORYQ9H606 182 aa12.5□□□□□ -0.41
SMARCB1-203ENST00000407082 RMND5AQ9H871 391 aa12.5□□□□□ -0.41
SMARCB1-203ENST00000407082 ACTR8Q9H981 624 aa12.5□□□□□ -0.41
SMARCB1-203ENST00000407082 LRTM1Q9HBL6 345 aa12.5□□□□□ -0.41
SMARCB1-203ENST00000407082 VCX3AQ9NNX9 186 aa12.5□□□□□ -0.41
SMARCB1-203ENST00000407082 C1orf109Q9NX04 203 aa12.5□□□□□ -0.41
SMARCB1-203ENST00000407082 ARL15Q9NXU5 204 aa12.5□□□□□ -0.41
SMARCB1-203ENST00000407082 CNOT6Q9ULM6 557 aaKnown RBP12.5□□□□□ -0.41
SMARCB1-203ENST00000407082 PTGDR2Q9Y5Y4 395 aa12.5□□□□□ -0.41
SMARCB1-203ENST00000407082 PRSS21Q9Y6M0 314 aa12.5□□□□□ -0.41
SMARCB1-203ENST00000407082 KALRNO60229 2985 aa12.5□□□□□ -0.41
SMARCB1-203ENST00000407082 ANKRD12Q6UB98 2062 aa12.49□□□□□ -0.41
SMARCB1-203ENST00000407082 ZNF839A8K0R7 811 aa12.49□□□□□ -0.41
SMARCB1-203ENST00000407082 NPIPB8E9PQR5 432 aa12.49□□□□□ -0.41
SMARCB1-203ENST00000407082 PYCARD-AS1I3L0S3 204 aa12.49□□□□□ -0.41
SMARCB1-203ENST00000407082 FXYD1O00168 92 aa12.49□□□□□ -0.41
SMARCB1-203ENST00000407082 PSMD11O00231 422 aa12.49□□□□□ -0.41
SMARCB1-203ENST00000407082 MANBAO00462 879 aa12.49□□□□□ -0.41
SMARCB1-203ENST00000407082 ARPC2O15144 300 aa12.49□□□□□ -0.41
SMARCB1-203ENST00000407082 TNFSF14O43557 240 aa12.49□□□□□ -0.41
SMARCB1-203ENST00000407082 SEC22BO75396 215 aa12.49□□□□□ -0.41
SMARCB1-203ENST00000407082 RSL1D1O76021 490 aaKnown RBP12.49□□□□□ -0.41
SMARCB1-203ENST00000407082 CLPTM1O96005 669 aa12.49□□□□□ -0.41
SMARCB1-203ENST00000407082 IGLV3-19P01714 112 aa12.49□□□□□ -0.41
SMARCB1-203ENST00000407082 GSTM1P09488 218 aa12.49□□□□□ -0.41
SMARCB1-203ENST00000407082 ZNF883P0CG24 379 aa12.49□□□□□ -0.41
SMARCB1-203ENST00000407082 ADRB3P13945 408 aa12.49□□□□□ -0.41
SMARCB1-203ENST00000407082 JUPP14923 745 aa12.49□□□□□ -0.41
SMARCB1-203ENST00000407082 TIMP2P16035 220 aa12.49□□□□□ -0.41
SMARCB1-203ENST00000407082 ZNF26P17031 533 aaPredicted RBP12.49□□□□□ -0.41
SMARCB1-203ENST00000407082 PRPH2P23942 346 aa12.49□□□□□ -0.41
SMARCB1-203ENST00000407082 MAP4P27816 1152 aaKnown RBP12.49□□□□□ -0.41
SMARCB1-203ENST00000407082 GSK3BP49841 420 aa12.49□□□□□ -0.41
SMARCB1-203ENST00000407082 HNRNPFP52597 415 aaKnown RBP12.49□□□□□ -0.41
SMARCB1-203ENST00000407082 BNC1Q01954 994 aa12.49□□□□□ -0.41
SMARCB1-203ENST00000407082 GSTM4Q03013 218 aa12.49□□□□□ -0.41
SMARCB1-203ENST00000407082 CFHR1Q03591 330 aa12.49□□□□□ -0.41
SMARCB1-203ENST00000407082 GBX1Q14549 363 aa12.49□□□□□ -0.41
SMARCB1-203ENST00000407082 ZNF284Q2VY69 593 aa12.49□□□□□ -0.41
SMARCB1-203ENST00000407082 KRT80Q6KB66 452 aa12.49□□□□□ -0.41
SMARCB1-203ENST00000407082 NANOGP8Q6NSW7 305 aa12.49□□□□□ -0.41
SMARCB1-203ENST00000407082 ERAP2Q6P179 960 aa12.49□□□□□ -0.41
SMARCB1-203ENST00000407082 SCIMPQ6UWF3 145 aa12.49□□□□□ -0.41
SMARCB1-203ENST00000407082 PARS2Q7L3T8 475 aaKnown RBP12.49□□□□□ -0.41
SMARCB1-203ENST00000407082 GALNT4Q8N4A0 578 aa12.49□□□□□ -0.41
SMARCB1-203ENST00000407082 CLDN19Q8N6F1 224 aa12.49□□□□□ -0.41
SMARCB1-203ENST00000407082 MFSD2AQ8NA29 543 aa12.49□□□□□ -0.41
SMARCB1-203ENST00000407082 OR2T11Q8NH01 316 aa12.49□□□□□ -0.41
SMARCB1-203ENST00000407082 OR14C36Q8NHC7 312 aa12.49□□□□□ -0.41
SMARCB1-203ENST00000407082 BAHD1Q8TBE0 780 aaPredicted RBP12.49□□□□□ -0.41
SMARCB1-203ENST00000407082 DNAJB14Q8TBM8 379 aa12.49□□□□□ -0.41
SMARCB1-203ENST00000407082 CANT1Q8WVQ1 401 aa12.49□□□□□ -0.41
SMARCB1-203ENST00000407082 DNASE2BQ8WZ79 361 aa12.49□□□□□ -0.41
SMARCB1-203ENST00000407082 USP7Q93009 1102 aa12.49□□□□□ -0.41
SMARCB1-203ENST00000407082 NSMCE2Q96MF7 247 aa12.49□□□□□ -0.41
SMARCB1-203ENST00000407082 FOPNLQ96NB1 174 aa12.49□□□□□ -0.41
SMARCB1-203ENST00000407082 CGREF1Q99674 301 aa12.49□□□□□ -0.41
SMARCB1-203ENST00000407082 BDH2Q9BUT1 245 aa12.49□□□□□ -0.41
SMARCB1-203ENST00000407082 C1orf50Q9BV19 199 aa12.49□□□□□ -0.41
SMARCB1-203ENST00000407082 UGT2B28Q9BY64 529 aa12.49□□□□□ -0.41
SMARCB1-203ENST00000407082 YIPF3Q9GZM5 350 aa12.49□□□□□ -0.41
SMARCB1-203ENST00000407082 BTBD1Q9H0C5 482 aa12.49□□□□□ -0.41
SMARCB1-203ENST00000407082 COQ10BQ9H8M1 238 aa12.49□□□□□ -0.41
SMARCB1-203ENST00000407082 NANOGQ9H9S0 305 aa12.49□□□□□ -0.41
SMARCB1-203ENST00000407082 B4GALT6Q9UBX8 382 aa12.49□□□□□ -0.41
SMARCB1-203ENST00000407082 KLQ9UEF7 1012 aa12.49□□□□□ -0.41
SMARCB1-203ENST00000407082 GIMAP2Q9UG22 337 aa12.49□□□□□ -0.41
SMARCB1-203ENST00000407082 ZNF490Q9ULM2 529 aaPredicted RBP12.49□□□□□ -0.41
SMARCB1-203ENST00000407082 FZD4Q9ULV1 537 aa12.49□□□□□ -0.41
SMARCB1-203ENST00000407082 AURKCQ9UQB9 309 aa12.49□□□□□ -0.41
SMARCB1-203ENST00000407082 KNTC1P50748 2209 aa12.49□□□□□ -0.41
SMARCB1-203ENST00000407082 PIKFYVEQ9Y2I7 2098 aa12.49□□□□□ -0.41
SMARCB1-203ENST00000407082 ARHGAP10A1A4S6 786 aa12.48□□□□□ -0.41
SMARCB1-203ENST00000407082 GSTA4O15217 222 aa12.48□□□□□ -0.41
SMARCB1-203ENST00000407082 ERN1O75460 977 aaKnown RBP12.48□□□□□ -0.41
SMARCB1-203ENST00000407082 FESP07332 822 aa12.48□□□□□ -0.41
SMARCB1-203ENST00000407082 PABPC4LP0CB38 370 aaKnown RBP12.48□□□□□ -0.41
SMARCB1-203ENST00000407082 G6PDP11413 515 aa12.48□□□□□ -0.41
SMARCB1-203ENST00000407082 ACSL1P33121 698 aa12.48□□□□□ -0.41
SMARCB1-203ENST00000407082 CASP2P42575 452 aa12.48□□□□□ -0.41
SMARCB1-203ENST00000407082 PNLIPRP1P54315 467 aa12.48□□□□□ -0.41
SMARCB1-203ENST00000407082 CLDN6P56747 220 aa12.48□□□□□ -0.41
SMARCB1-203ENST00000407082 ABRAXAS2Q15018 415 aa12.48□□□□□ -0.41
SMARCB1-203ENST00000407082 PTPRRQ15256 657 aa12.48□□□□□ -0.41
SMARCB1-203ENST00000407082 FXNQ16595 210 aa12.48□□□□□ -0.41
SMARCB1-203ENST00000407082 MAPKAPK3Q16644 382 aa12.48□□□□□ -0.41
SMARCB1-203ENST00000407082 CYP51A1Q16850 503 aa12.48□□□□□ -0.41
SMARCB1-203ENST00000407082 DPY19L1Q2PZI1 675 aa12.48□□□□□ -0.41
SMARCB1-203ENST00000407082 ATP13A5Q4VNC0 1218 aa12.48□□□□□ -0.41
SMARCB1-203ENST00000407082 TIGD2Q4W5G0 525 aa12.48□□□□□ -0.41
SMARCB1-203ENST00000407082 FAM98BQ52LJ0 330 aaKnown RBP12.48□□□□□ -0.41
SMARCB1-203ENST00000407082 FBXO48Q5FWF7 155 aa12.48□□□□□ -0.41
SMARCB1-203ENST00000407082 PIP5KL1Q5T9C9 394 aa12.48□□□□□ -0.41
SMARCB1-203ENST00000407082 AGBL4Q5VU57 503 aa12.48□□□□□ -0.41
SMARCB1-203ENST00000407082 LIPJQ5W064 366 aa12.48□□□□□ -0.41
SMARCB1-203ENST00000407082 GPR155Q7Z3F1 870 aa12.48□□□□□ -0.41
SMARCB1-203ENST00000407082 TSPAN33Q86UF1 283 aa12.48□□□□□ -0.41
SMARCB1-203ENST00000407082 ZSWIM9Q86XI8 627 aa12.48□□□□□ -0.41
SMARCB1-203ENST00000407082 SPPL2CQ8IUH8 684 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms