RNA–Protein interactions for RNA: ENST00000404484.8

TPM1-208, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-208ENST00000404484 EFCAB1Q9HAE3 211 aa20.23■□□□□ 0.83
TPM1-208ENST00000404484 TMEM9BQ9NQ34 198 aa20.23■□□□□ 0.83
TPM1-208ENST00000404484 NMRK1Q9NWW6 199 aa20.23■□□□□ 0.83
TPM1-208ENST00000404484 GEMIN8Q9NWZ8 242 aaKnown RBP20.23■□□□□ 0.83
TPM1-208ENST00000404484 OR6C2Q9NZP2 312 aa20.23■□□□□ 0.83
TPM1-208ENST00000404484 CCDC167Q9P0B6 97 aa20.23■□□□□ 0.83
TPM1-208ENST00000404484 TAAR2Q9P1P5 351 aa20.23■□□□□ 0.83
TPM1-208ENST00000404484 ADAMTS9Q9P2N4 1935 aa20.23■□□□□ 0.83
TPM1-208ENST00000404484 APOBEC3BQ9UH17 382 aaKnown RBP20.23■□□□□ 0.83
TPM1-208ENST00000404484 ICKQ9UPZ9 632 aa20.23■□□□□ 0.83
TPM1-208ENST00000404484 TSC22D4Q9Y3Q8 395 aa20.23■□□□□ 0.83
TPM1-208ENST00000404484 KIR2DS5A0A0G2JLQ3 304 aa20.22■□□□□ 0.83
TPM1-208ENST00000404484 A0A0G2JNG1 304 aa20.22■□□□□ 0.83
TPM1-208ENST00000404484 PIPSLA2A3N6 862 aa20.22■□□□□ 0.83
TPM1-208ENST00000404484 BBIP1A8MTZ0 92 aa20.22■□□□□ 0.83
TPM1-208ENST00000404484 KIR2DS3K7RE56 304 aa20.22■□□□□ 0.83
TPM1-208ENST00000404484 SEC22BO75396 215 aa20.22■□□□□ 0.83
TPM1-208ENST00000404484 CCNDBP1O95273 360 aa20.22■□□□□ 0.83
TPM1-208ENST00000404484 SYPP08247 313 aa20.22■□□□□ 0.83
TPM1-208ENST00000404484 CDH1P12830 882 aa20.22■□□□□ 0.83
TPM1-208ENST00000404484 JUNDP17535 347 aa20.22■□□□□ 0.83
TPM1-208ENST00000404484 KIR2DS5Q14953 304 aa20.22■□□□□ 0.83
TPM1-208ENST00000404484 CATSPEREQ5SY80 951 aa20.22■□□□□ 0.83
TPM1-208ENST00000404484 TAF8Q7Z7C8 310 aa20.22■□□□□ 0.83
TPM1-208ENST00000404484 LAS2Q8IYD9 372 aa20.22■□□□□ 0.83
TPM1-208ENST00000404484 C2orf73Q8N5S3 287 aaPredicted RBP20.22■□□□□ 0.83
TPM1-208ENST00000404484 LINC01555Q8NAE3 123 aa20.22■□□□□ 0.83
TPM1-208ENST00000404484 AIF1LQ9BQI0 150 aa20.22■□□□□ 0.83
TPM1-208ENST00000404484 C1orf50Q9BV19 199 aa20.22■□□□□ 0.83
TPM1-208ENST00000404484 POT1Q9NUX5 634 aa20.22■□□□□ 0.83
TPM1-208ENST00000404484 ZNF624Q9P2J8 865 aaPredicted RBP20.22■□□□□ 0.83
TPM1-208ENST00000404484 ADGRE2Q9UHX3 823 aa20.22■□□□□ 0.83
TPM1-208ENST00000404484 A0A1B0GVT2 93 aa20.21■□□□□ 0.83
TPM1-208ENST00000404484 A0A1W2PPV9 198 aa20.21■□□□□ 0.83
TPM1-208ENST00000404484 TM4SF5O14894 197 aa20.21■□□□□ 0.83
TPM1-208ENST00000404484 GSC2O15499 205 aa20.21■□□□□ 0.83
TPM1-208ENST00000404484 EML2O95834 649 aa20.21■□□□□ 0.83
TPM1-208ENST00000404484 KRT16P08779 473 aa20.21■□□□□ 0.83
TPM1-208ENST00000404484 PCNAP12004 261 aa20.21■□□□□ 0.83
TPM1-208ENST00000404484 CCR8P51685 355 aa20.21■□□□□ 0.83
TPM1-208ENST00000404484 NEK2P51955 445 aa20.21■□□□□ 0.83
TPM1-208ENST00000404484 ABATP80404 500 aa20.21■□□□□ 0.83
TPM1-208ENST00000404484 RFTN2Q52LD8 501 aaPredicted RBP20.21■□□□□ 0.83
TPM1-208ENST00000404484 IL23RQ5VWK5 629 aa20.21■□□□□ 0.83
TPM1-208ENST00000404484 IYDQ6PHW0 289 aa20.21■□□□□ 0.83
TPM1-208ENST00000404484 PAOXQ6QHF9 649 aa20.21■□□□□ 0.83
TPM1-208ENST00000404484 LAYNQ6UX15 382 aa20.21■□□□□ 0.83
TPM1-208ENST00000404484 GK5Q6ZS86 529 aa20.21■□□□□ 0.83
TPM1-208ENST00000404484 ABHD11Q8NFV4 315 aa20.21■□□□□ 0.83
TPM1-208ENST00000404484 LCN9Q8WX39 176 aa20.21■□□□□ 0.83
TPM1-208ENST00000404484 ACAT2Q9BWD1 397 aa20.21■□□□□ 0.83
TPM1-208ENST00000404484 MRPL1Q9BYD6 325 aaKnown RBP20.21■□□□□ 0.83
TPM1-208ENST00000404484 TCEAL2Q9H3H9 227 aaPredicted RBP20.21■□□□□ 0.83
TPM1-208ENST00000404484 PRM3Q9NNZ6 103 aa20.21■□□□□ 0.83
TPM1-208ENST00000404484 VPS29Q9UBQ0 182 aa20.21■□□□□ 0.83
TPM1-208ENST00000404484 SH2B3Q9UQQ2 575 aa20.21■□□□□ 0.83
TPM1-208ENST00000404484 POLR3HQ9Y535 204 aaPredicted RBP20.21■□□□□ 0.83
TPM1-208ENST00000404484 PCDH15Q96QU1 1955 aa20.21■□□□□ 0.83
TPM1-208ENST00000404484 DYTNA2CJ06 578 aa20.21■□□□□ 0.83
TPM1-208ENST00000404484 DCDC2BA2VCK2 349 aa20.21■□□□□ 0.83
TPM1-208ENST00000404484 FOXE1O00358 373 aaPredicted RBP20.21■□□□□ 0.83
TPM1-208ENST00000404484 SLC22A3O75751 556 aa20.21■□□□□ 0.83
TPM1-208ENST00000404484 CSF2P04141 144 aa20.21■□□□□ 0.83
TPM1-208ENST00000404484 WNT1P04628 370 aa20.21■□□□□ 0.83
TPM1-208ENST00000404484 NME1P15531 152 aaKnown RBP20.21■□□□□ 0.83
TPM1-208ENST00000404484 XRCC1P18887 633 aaPredicted RBP20.21■□□□□ 0.83
TPM1-208ENST00000404484 SERPINB1P30740 379 aa20.21■□□□□ 0.83
TPM1-208ENST00000404484 SLC19A1P41440 591 aa20.21■□□□□ 0.83
TPM1-208ENST00000404484 ATXN3P54252 364 aaPredicted RBP20.21■□□□□ 0.83
TPM1-208ENST00000404484 ART3Q13508 389 aa20.21■□□□□ 0.83
TPM1-208ENST00000404484 ELOCQ15369 112 aa20.21■□□□□ 0.83
TPM1-208ENST00000404484 TCEA2Q15560 299 aa20.21■□□□□ 0.83
TPM1-208ENST00000404484 MMEL1Q495T6 779 aa20.21■□□□□ 0.83
TPM1-208ENST00000404484 ICE2Q659A1 982 aa20.21■□□□□ 0.83
TPM1-208ENST00000404484 C16orf89Q6UX73 402 aa20.21■□□□□ 0.83
TPM1-208ENST00000404484 AMIGO1Q86WK6 493 aa20.21■□□□□ 0.83
TPM1-208ENST00000404484 LMNTD1Q8N9Z9 388 aa20.21■□□□□ 0.83
TPM1-208ENST00000404484 AVL9Q8NBF6 648 aa20.21■□□□□ 0.83
TPM1-208ENST00000404484 KYQ8NBH2 561 aa20.21■□□□□ 0.83
TPM1-208ENST00000404484 CADM1Q9BY67 442 aaKnown RBP20.21■□□□□ 0.83
TPM1-208ENST00000404484 XKR8Q9H6D3 395 aa20.21■□□□□ 0.83
TPM1-208ENST00000404484 KLF15Q9UIH9 416 aa20.21■□□□□ 0.83
TPM1-208ENST00000404484 VIPP01282 170 aa20.2■□□□□ 0.82
TPM1-208ENST00000404484 PRPS2P11908 318 aa20.2■□□□□ 0.82
TPM1-208ENST00000404484 CPOXP36551 454 aa20.2■□□□□ 0.82
TPM1-208ENST00000404484 PIK3CBP42338 1070 aa20.2■□□□□ 0.82
TPM1-208ENST00000404484 NUDT2P50583 147 aa20.2■□□□□ 0.82
TPM1-208ENST00000404484 PRDX1Q06830 199 aaKnown RBP20.2■□□□□ 0.82
TPM1-208ENST00000404484 DDX39BQ13838 428 aaKnown RBP20.2■□□□□ 0.82
TPM1-208ENST00000404484 ZNF542PQ5EBM4 170 aa20.2■□□□□ 0.82
TPM1-208ENST00000404484 PRRT3Q5FWE3 981 aa20.2■□□□□ 0.82
TPM1-208ENST00000404484 CYP20A1Q6UW02 462 aa20.2■□□□□ 0.82
TPM1-208ENST00000404484 TMIGD1Q6UXZ0 262 aa20.2■□□□□ 0.82
TPM1-208ENST00000404484 RBM12BQ8IXT5 1001 aaKnown RBP20.2■□□□□ 0.82
TPM1-208ENST00000404484 MINDY1Q8N5J2 469 aa20.2■□□□□ 0.82
TPM1-208ENST00000404484 HUS1BQ8NHY5 278 aa20.2■□□□□ 0.82
TPM1-208ENST00000404484 SLC22A18Q96BI1 424 aa20.2■□□□□ 0.82
TPM1-208ENST00000404484 RCN3Q96D15 328 aa20.2■□□□□ 0.82
TPM1-208ENST00000404484 ZBTB18Q99592 522 aa20.2■□□□□ 0.82
TPM1-208ENST00000404484 NT5DC2Q9H857 520 aa20.2■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 264.5 ms