RNA–Protein interactions for RNA: ENST00000399017.6

TTC3-204, Transcript of tetratricopeptide repeat domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TTC3, Length 10,363 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-204ENST00000399017 GRIA4P48058 902 aa4.89□□□□□ -1.63
TTC3-204ENST00000399017 CCZ1BP86790 482 aa4.89□□□□□ -1.63
TTC3-204ENST00000399017 CCZ1P86791 482 aaPredicted RBP4.89□□□□□ -1.63
TTC3-204ENST00000399017 C8orf59Q8N0T1 100 aaPredicted RBP4.89□□□□□ -1.63
TTC3-204ENST00000399017 GLB1L3Q8NCI6 653 aaPredicted RBP4.89□□□□□ -1.63
TTC3-204ENST00000399017 FAM3CQ92520 227 aa4.89□□□□□ -1.63
TTC3-204ENST00000399017 CMTM7Q96FZ5 175 aa4.89□□□□□ -1.63
TTC3-204ENST00000399017 SEPHS2Q99611 448 aa4.89□□□□□ -1.63
TTC3-204ENST00000399017 NXF3Q9H4D5 531 aaKnown RBP4.89□□□□□ -1.63
TTC3-204ENST00000399017 GDE1Q9NZC3 331 aa4.89□□□□□ -1.63
TTC3-204ENST00000399017 STOX2Q9P2F5 926 aaPredicted RBP4.89□□□□□ -1.63
TTC3-204ENST00000399017 GPR34Q9UPC5 381 aa4.89□□□□□ -1.63
TTC3-204ENST00000399017 SRPK3Q9UPE1 567 aa4.89□□□□□ -1.63
TTC3-204ENST00000399017 PGAM2P15259 253 aa4.89□□□□□ -1.63
TTC3-204ENST00000399017 GGT2P36268 569 aa4.89□□□□□ -1.63
TTC3-204ENST00000399017 SLC1A3P43003 542 aa4.89□□□□□ -1.63
TTC3-204ENST00000399017 MAPK7Q13164 816 aa4.89□□□□□ -1.63
TTC3-204ENST00000399017 GRIN2CQ14957 1233 aa4.89□□□□□ -1.63
TTC3-204ENST00000399017 RBM48Q5RL73 367 aaKnown RBP4.89□□□□□ -1.63
TTC3-204ENST00000399017 DDX59Q5T1V6 619 aaKnown RBP eCLIP4.89□□□□□ -1.63
TTC3-204ENST00000399017 KIAA1161Q6NSJ0 714 aa4.89□□□□□ -1.63
TTC3-204ENST00000399017 CEACAM20Q6UY09 585 aa4.89□□□□□ -1.63
TTC3-204ENST00000399017 SV2AQ7L0J3 742 aa4.89□□□□□ -1.63
TTC3-204ENST00000399017 OTOP1Q7RTM1 612 aa4.89□□□□□ -1.63
TTC3-204ENST00000399017 PARP8Q8N3A8 854 aa4.89□□□□□ -1.63
TTC3-204ENST00000399017 ZDHHC16Q969W1 377 aa4.89□□□□□ -1.63
TTC3-204ENST00000399017 SGF29Q96ES7 293 aa4.89□□□□□ -1.63
TTC3-204ENST00000399017 FBXL18Q96ME1 805 aa4.89□□□□□ -1.63
TTC3-204ENST00000399017 B3GNT4Q9C0J1 378 aa4.89□□□□□ -1.63
TTC3-204ENST00000399017 SLC5A7Q9GZV3 580 aa4.89□□□□□ -1.63
TTC3-204ENST00000399017 DAPK2Q9UIK4 370 aa4.89□□□□□ -1.63
TTC3-204ENST00000399017 TSC22D4Q9Y3Q8 395 aa4.89□□□□□ -1.63
TTC3-204ENST00000399017 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP4.89□□□□□ -1.632e-6■■■■■ 36.6
TTC3-204ENST00000399017 SIPA1L2Q9P2F8 1722 aaPredicted RBP4.89□□□□□ -1.63
TTC3-204ENST00000399017 FFAR2O15552 330 aa4.88□□□□□ -1.63
TTC3-204ENST00000399017 NTSR1P30989 418 aa4.88□□□□□ -1.63
TTC3-204ENST00000399017 ADH7P40394 386 aa4.88□□□□□ -1.63
TTC3-204ENST00000399017 RARRES1P49788 294 aa4.88□□□□□ -1.63
TTC3-204ENST00000399017 MERTKQ12866 999 aa4.88□□□□□ -1.63
TTC3-204ENST00000399017 GNMTQ14749 295 aa4.88□□□□□ -1.63
TTC3-204ENST00000399017 BTBD16Q32M84 506 aa4.88□□□□□ -1.63
TTC3-204ENST00000399017 NT5DC1Q5TFE4 455 aa4.88□□□□□ -1.63
TTC3-204ENST00000399017 LRIG3Q6UXM1 1119 aa4.88□□□□□ -1.63
TTC3-204ENST00000399017 GRASPQ7Z6J2 395 aaPredicted RBP4.88□□□□□ -1.63
TTC3-204ENST00000399017 PROKR2Q8NFJ6 384 aa4.88□□□□□ -1.63
TTC3-204ENST00000399017 APOL2Q9BQE5 337 aa4.88□□□□□ -1.63
TTC3-204ENST00000399017 UNKLQ9H9P5 680 aaKnown RBP4.88□□□□□ -1.63
TTC3-204ENST00000399017 PDCD11Q14690 1871 aaKnown RBP4.88□□□□□ -1.63
TTC3-204ENST00000399017 AXIN1O15169 862 aa4.88□□□□□ -1.63
TTC3-204ENST00000399017 TPST1O60507 370 aa4.88□□□□□ -1.63
TTC3-204ENST00000399017 METTL18O95568 372 aa4.88□□□□□ -1.63
TTC3-204ENST00000399017 DIRAS3O95661 229 aa4.88□□□□□ -1.63
TTC3-204ENST00000399017 NDST3O95803 873 aa4.88□□□□□ -1.63
TTC3-204ENST00000399017 SNRPB2P08579 225 aaKnown RBP4.88□□□□□ -1.63
TTC3-204ENST00000399017 TSHRP16473 764 aa4.88□□□□□ -1.63
TTC3-204ENST00000399017 ZNF16P17020 682 aaPredicted RBP4.88□□□□□ -1.63
TTC3-204ENST00000399017 MAOAP21397 527 aa4.88□□□□□ -1.63
TTC3-204ENST00000399017 RAP1GAPP47736 663 aa4.88□□□□□ -1.63
TTC3-204ENST00000399017 SEPHS1P49903 392 aa4.88□□□□□ -1.63
TTC3-204ENST00000399017 PTENP60484 403 aa4.88□□□□□ -1.63
TTC3-204ENST00000399017 HOXA4Q00056 320 aaPredicted RBP4.88□□□□□ -1.63
TTC3-204ENST00000399017 HSF5Q4G112 596 aaPredicted RBP4.88□□□□□ -1.63
TTC3-204ENST00000399017 OR7A2PQ8NGA2 310 aa4.88□□□□□ -1.63
TTC3-204ENST00000399017 OR56B2PQ8NGI1 322 aa4.88□□□□□ -1.63
TTC3-204ENST00000399017 TRIB1Q96RU8 372 aa4.88□□□□□ -1.63
TTC3-204ENST00000399017 CD180Q99467 661 aa4.88□□□□□ -1.63
TTC3-204ENST00000399017 LRTM1Q9HBL6 345 aa4.88□□□□□ -1.63
TTC3-204ENST00000399017 GKN1Q9NS71 199 aa4.88□□□□□ -1.63
TTC3-204ENST00000399017 LOC105369274A0A096LPK9 316 aa4.88□□□□□ -1.63
TTC3-204ENST00000399017 LRRTM2O43300 516 aa4.88□□□□□ -1.63
TTC3-204ENST00000399017 SLC25A17O43808 307 aa4.88□□□□□ -1.63
TTC3-204ENST00000399017 GALK1P51570 392 aa4.88□□□□□ -1.63
TTC3-204ENST00000399017 ZNF169Q14929 603 aaPredicted RBP4.88□□□□□ -1.63
TTC3-204ENST00000399017 MFSD13AQ14CX5 517 aa4.88□□□□□ -1.63
TTC3-204ENST00000399017 EIF4HQ15056 248 aaKnown RBP4.88□□□□□ -1.63
TTC3-204ENST00000399017 LRRC36Q1X8D7 754 aa4.88□□□□□ -1.63
TTC3-204ENST00000399017 SLC47A2Q86VL8 602 aa4.88□□□□□ -1.63
TTC3-204ENST00000399017 OR4N4Q8N0Y3 316 aa4.88□□□□□ -1.63
TTC3-204ENST00000399017 TMIEQ8NEW7 156 aa4.88□□□□□ -1.63
TTC3-204ENST00000399017 PHOSPHO1Q8TCT1 267 aa4.88□□□□□ -1.63
TTC3-204ENST00000399017 OR5P2Q8WZ92 322 aa4.88□□□□□ -1.63
TTC3-204ENST00000399017 TCTN2Q96GX1 697 aa4.88□□□□□ -1.63
TTC3-204ENST00000399017 CDRT15Q96T59 188 aa4.88□□□□□ -1.63
TTC3-204ENST00000399017 HOPXQ9BPY8 73 aaPredicted RBP4.88□□□□□ -1.63
TTC3-204ENST00000399017 PARPBPQ9NWS1 579 aa4.88□□□□□ -1.63
TTC3-204ENST00000399017 TNFRSF10DQ9UBN6 386 aa4.88□□□□□ -1.63
TTC3-204ENST00000399017 BLACEA4D250 179 aa4.88□□□□□ -1.63
TTC3-204ENST00000399017 PRAMEF26H0Y7S4 382 aa4.88□□□□□ -1.63
TTC3-204ENST00000399017 PLOD3O60568 738 aa4.88□□□□□ -1.63
TTC3-204ENST00000399017 ATE1O95260 518 aa4.88□□□□□ -1.63
TTC3-204ENST00000399017 F2RL1P55085 397 aa4.88□□□□□ -1.63
TTC3-204ENST00000399017 EEF1A2Q05639 463 aaKnown RBP4.88□□□□□ -1.63
TTC3-204ENST00000399017 SEMA5AQ13591 1074 aa4.88□□□□□ -1.63
TTC3-204ENST00000399017 SERTAD2Q14140 314 aa4.88□□□□□ -1.63
TTC3-204ENST00000399017 NUDT13Q86X67 352 aa4.88□□□□□ -1.63
TTC3-204ENST00000399017 OR4N5Q8IXE1 308 aa4.88□□□□□ -1.63
TTC3-204ENST00000399017 MREGQ8N565 214 aa4.88□□□□□ -1.63
TTC3-204ENST00000399017 POC1BQ8TC44 478 aa4.88□□□□□ -1.63
TTC3-204ENST00000399017 ANKS1AQ92625 1134 aa4.88□□□□□ -1.63
TTC3-204ENST00000399017 CNDP2Q96KP4 475 aaKnown RBP4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms