RNA–Protein interactions for RNA: ENST00000397200.8

CAPN3-207, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-207ENST00000397200 SAMD4BQ5PRF9 694 aaKnown RBP14.39□□□□□ -0.11
CAPN3-207ENST00000397200 C6orf136Q5SQH8 315 aa14.39□□□□□ -0.11
CAPN3-207ENST00000397200 C6orf132Q5T0Z8 1188 aa14.39□□□□□ -0.11
CAPN3-207ENST00000397200 KANSL1Q7Z3B3 1105 aa14.39□□□□□ -0.11
CAPN3-207ENST00000397200 SLC9B2Q86UD5 537 aa14.39□□□□□ -0.11
CAPN3-207ENST00000397200 TMEM126BQ8IUX1 230 aa14.39□□□□□ -0.11
CAPN3-207ENST00000397200 SFRP1Q8N474 314 aa14.39□□□□□ -0.11
CAPN3-207ENST00000397200 SLC37A2Q8TED4 501 aa14.39□□□□□ -0.11
CAPN3-207ENST00000397200 RAD51AP1Q96B01 352 aa14.39□□□□□ -0.11
CAPN3-207ENST00000397200 DUSP23Q9BVJ7 150 aa14.39□□□□□ -0.11
CAPN3-207ENST00000397200 SEMA4GQ9NTN9 838 aa14.39□□□□□ -0.11
CAPN3-207ENST00000397200 POT1Q9NUX5 634 aa14.39□□□□□ -0.11
CAPN3-207ENST00000397200 ARL15Q9NXU5 204 aa14.39□□□□□ -0.11
CAPN3-207ENST00000397200 NLGN3Q9NZ94 848 aa14.39□□□□□ -0.11
CAPN3-207ENST00000397200 WWOXQ9NZC7 414 aa14.39□□□□□ -0.11
CAPN3-207ENST00000397200 C6orf203Q9P0P8 240 aaPredicted RBP14.39□□□□□ -0.11
CAPN3-207ENST00000397200 MAP10Q9P2G4 905 aa14.39□□□□□ -0.11
CAPN3-207ENST00000397200 TDRKHQ9Y2W6 561 aaKnown RBP14.39□□□□□ -0.11
CAPN3-207ENST00000397200 CCL27Q9Y4X3 112 aa14.39□□□□□ -0.11
CAPN3-207ENST00000397200 LAMA1P25391 3075 aa14.39□□□□□ -0.11
CAPN3-207ENST00000397200 PRSS51A0A1B0GVH4 220 aa14.38□□□□□ -0.11
CAPN3-207ENST00000397200 PCDHGA12O60330 932 aa14.38□□□□□ -0.11
CAPN3-207ENST00000397200 GUCA1CO95843 209 aa14.38□□□□□ -0.11
CAPN3-207ENST00000397200 C8BP07358 591 aa14.38□□□□□ -0.11
CAPN3-207ENST00000397200 ZNF883P0CG24 379 aa14.38□□□□□ -0.11
CAPN3-207ENST00000397200 SLC19A1P41440 591 aa14.38□□□□□ -0.11
CAPN3-207ENST00000397200 DIO3P55073 304 aa14.38□□□□□ -0.11
CAPN3-207ENST00000397200 AP1S2P56377 157 aa14.38□□□□□ -0.11
CAPN3-207ENST00000397200 PRKG2Q13237 762 aa14.38□□□□□ -0.11
CAPN3-207ENST00000397200 TRIM25Q14258 630 aaKnown RBP14.38□□□□□ -0.11
CAPN3-207ENST00000397200 CSRP2Q16527 193 aa14.38□□□□□ -0.11
CAPN3-207ENST00000397200 OGFOD3Q6PK18 319 aa14.38□□□□□ -0.11
CAPN3-207ENST00000397200 SFTPA2Q8IWL1 248 aa14.38□□□□□ -0.11
CAPN3-207ENST00000397200 TCAIMQ8N3R3 496 aa14.38□□□□□ -0.11
CAPN3-207ENST00000397200 AVL9Q8NBF6 648 aa14.38□□□□□ -0.11
CAPN3-207ENST00000397200 METTL6Q8TCB7 284 aa14.38□□□□□ -0.11
CAPN3-207ENST00000397200 DUS3LQ96G46 650 aaKnown RBP14.38□□□□□ -0.11
CAPN3-207ENST00000397200 CDK15Q96Q40 435 aa14.38□□□□□ -0.11
CAPN3-207ENST00000397200 EGFL8Q99944 293 aa14.38□□□□□ -0.11
CAPN3-207ENST00000397200 HOPXQ9BPY8 73 aaPredicted RBP14.38□□□□□ -0.11
CAPN3-207ENST00000397200 IPPKQ9H8X2 491 aa14.38□□□□□ -0.11
CAPN3-207ENST00000397200 CPNE7Q9UBL6 633 aa14.38□□□□□ -0.11
CAPN3-207ENST00000397200 OPTCQ9UBM4 332 aa14.38□□□□□ -0.11
CAPN3-207ENST00000397200 A0A1W2PP18 115 aa14.37□□□□□ -0.11
CAPN3-207ENST00000397200 ASPDHA6ND91 283 aa14.37□□□□□ -0.11
CAPN3-207ENST00000397200 PRORSD1PA6NEY8 169 aa14.37□□□□□ -0.11
CAPN3-207ENST00000397200 LSM1O15116 133 aaKnown RBP14.37□□□□□ -0.11
CAPN3-207ENST00000397200 PEX1O43933 1283 aa14.37□□□□□ -0.11
CAPN3-207ENST00000397200 KDM1AO60341 852 aa14.37□□□□□ -0.11
CAPN3-207ENST00000397200 NOBOXO60393 691 aa14.37□□□□□ -0.11
CAPN3-207ENST00000397200 BAG2O95816 211 aa14.37□□□□□ -0.11
CAPN3-207ENST00000397200 CAPNS1P04632 268 aa14.37□□□□□ -0.11
CAPN3-207ENST00000397200 EBLN1P0CF75 366 aa14.37□□□□□ -0.11
CAPN3-207ENST00000397200 GIMD1P0DJR0 217 aa14.37□□□□□ -0.11
CAPN3-207ENST00000397200 MAZP56270 477 aaKnown RBP14.37□□□□□ -0.11
CAPN3-207ENST00000397200 UBE2IP63279 158 aaKnown RBP14.37□□□□□ -0.11
CAPN3-207ENST00000397200 EMX2Q04743 252 aa14.37□□□□□ -0.11
CAPN3-207ENST00000397200 BIRC2Q13490 618 aa14.37□□□□□ -0.11
CAPN3-207ENST00000397200 SUZ12Q15022 739 aaKnown RBP14.37□□□□□ -0.11
CAPN3-207ENST00000397200 CCSMST1Q4G0I0 132 aa14.37□□□□□ -0.11
CAPN3-207ENST00000397200 IRAK1BP1Q5VVH5 260 aa14.37□□□□□ -0.11
CAPN3-207ENST00000397200 LRRC70Q7Z2Q7 622 aa14.37□□□□□ -0.11
CAPN3-207ENST00000397200 PQLC1Q8N2U9 271 aa14.37□□□□□ -0.11
CAPN3-207ENST00000397200 BHLHE22Q8NFJ8 381 aaPredicted RBP14.37□□□□□ -0.11
CAPN3-207ENST00000397200 OR4C6Q8NH72 309 aa14.37□□□□□ -0.11
CAPN3-207ENST00000397200 SPDL1Q96EA4 605 aa14.37□□□□□ -0.11
CAPN3-207ENST00000397200 CCDC138Q96M89 665 aa14.37□□□□□ -0.11
CAPN3-207ENST00000397200 CAMK1GQ96NX5 476 aa14.37□□□□□ -0.11
CAPN3-207ENST00000397200 PKP4Q99569 1192 aa14.37□□□□□ -0.11
CAPN3-207ENST00000397200 ECSITQ9BQ95 431 aa14.37□□□□□ -0.11
CAPN3-207ENST00000397200 EDEM2Q9BV94 578 aa14.37□□□□□ -0.11
CAPN3-207ENST00000397200 SLC29A3Q9BZD2 475 aa14.37□□□□□ -0.11
CAPN3-207ENST00000397200 DNAAF2Q9NVR5 837 aaKnown RBP14.37□□□□□ -0.11
CAPN3-207ENST00000397200 CIDEBQ9UHD4 219 aa14.37□□□□□ -0.11
CAPN3-207ENST00000397200 PRAMEF33A0A0G2JMD5 474 aa14.37□□□□□ -0.11
CAPN3-207ENST00000397200 PROB1E7EW31 1015 aa14.37□□□□□ -0.11
CAPN3-207ENST00000397200 ANGPT2O15123 496 aa14.37□□□□□ -0.11
CAPN3-207ENST00000397200 EEDO75530 441 aaKnown RBP14.37□□□□□ -0.11
CAPN3-207ENST00000397200 ANXA5P08758 320 aa14.37□□□□□ -0.11
CAPN3-207ENST00000397200 EPORP19235 508 aa14.37□□□□□ -0.11
CAPN3-207ENST00000397200 SLC6A12P48065 614 aa14.37□□□□□ -0.11
CAPN3-207ENST00000397200 HHEXQ03014 270 aa14.37□□□□□ -0.11
CAPN3-207ENST00000397200 GGTA1PQ4G0N0 100 aa14.37□□□□□ -0.11
CAPN3-207ENST00000397200 C14orf28Q4W4Y0 310 aa14.37□□□□□ -0.11
CAPN3-207ENST00000397200 ATP6AP1LQ52LC2 224 aa14.37□□□□□ -0.11
CAPN3-207ENST00000397200 C6orf10Q5SRN2 563 aa14.37□□□□□ -0.11
CAPN3-207ENST00000397200 OGFRL1Q5TC84 451 aaPredicted RBP14.37□□□□□ -0.11
CAPN3-207ENST00000397200 ZCCHC8Q6NZY4 707 aaKnown RBP14.37□□□□□ -0.11
CAPN3-207ENST00000397200 MBOAT1Q6ZNC8 495 aa14.37□□□□□ -0.11
CAPN3-207ENST00000397200 MILR1Q7Z6M3 343 aa14.37□□□□□ -0.11
CAPN3-207ENST00000397200 RBM12BQ8IXT5 1001 aaKnown RBP14.37□□□□□ -0.11
CAPN3-207ENST00000397200 ARL14Q8N4G2 192 aa14.37□□□□□ -0.11
CAPN3-207ENST00000397200 RAB42Q8N4Z0 105 aa14.37□□□□□ -0.11
CAPN3-207ENST00000397200 RNF148Q8N7C7 305 aa14.37□□□□□ -0.11
CAPN3-207ENST00000397200 ARL10Q8N8L6 244 aa14.37□□□□□ -0.11
CAPN3-207ENST00000397200 DCBLD1Q8N8Z6 715 aa14.37□□□□□ -0.11
CAPN3-207ENST00000397200 GPR156Q8NFN8 814 aa14.37□□□□□ -0.11
CAPN3-207ENST00000397200 OR9A1PQ8NGU1 263 aa14.37□□□□□ -0.11
CAPN3-207ENST00000397200 VCX3BQ9H321 246 aa14.37□□□□□ -0.11
CAPN3-207ENST00000397200 KIR3DX1Q9H7L2 352 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms