RNA–Protein interactions for RNA: ENST00000397004.8

NUP98-204, Transcript of nucleoporin 98, humanhuman

TSL 1 (best) BASIC

Gene NUP98, Length 3,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-204ENST00000397004 TPK1Q9H3S4 243 aa13.47□□□□□ -0.25
NUP98-204ENST00000397004 RUBCNLQ9H714 662 aa13.47□□□□□ -0.25
NUP98-204ENST00000397004 HELZP42694 1942 aaKnown RBP13.47□□□□□ -0.25
NUP98-204ENST00000397004 NUAK1O60285 661 aa13.47□□□□□ -0.25
NUP98-204ENST00000397004 SH3BGRLO75368 114 aa13.47□□□□□ -0.25
NUP98-204ENST00000397004 UGT2B10P36537 528 aa13.47□□□□□ -0.25
NUP98-204ENST00000397004 TIGD6Q17RP2 521 aa13.47□□□□□ -0.25
NUP98-204ENST00000397004 PTCHD3Q3KNS1 767 aa13.47□□□□□ -0.25
NUP98-204ENST00000397004 MACC1Q6ZN28 852 aa13.47□□□□□ -0.25
NUP98-204ENST00000397004 EIF3MQ7L2H7 374 aaKnown RBP13.47□□□□□ -0.25
NUP98-204ENST00000397004 IL17RDQ8NFM7 739 aa13.47□□□□□ -0.25
NUP98-204ENST00000397004 PANX1Q96RD7 426 aa13.47□□□□□ -0.25
NUP98-204ENST00000397004 P2RY13Q9BPV8 354 aa13.47□□□□□ -0.25
NUP98-204ENST00000397004 APOL4Q9BPW4 351 aa13.47□□□□□ -0.25
NUP98-204ENST00000397004 TTLL2Q9BWV7 592 aa13.47□□□□□ -0.25
NUP98-204ENST00000397004 RSPO3Q9BXY4 272 aaPredicted RBP13.47□□□□□ -0.25
NUP98-204ENST00000397004 GABARAPL3Q9BY60 117 aa13.47□□□□□ -0.25
NUP98-204ENST00000397004 ZFYVE1Q9HBF4 777 aa13.47□□□□□ -0.25
NUP98-204ENST00000397004 RDH14Q9HBH5 336 aa13.47□□□□□ -0.25
NUP98-204ENST00000397004 SLC22A14Q9Y267 594 aa13.47□□□□□ -0.25
NUP98-204ENST00000397004 PCDHGA3Q9Y5H0 932 aa13.47□□□□□ -0.25
NUP98-204ENST00000397004 MICAL3Q7RTP6 2002 aa13.47□□□□□ -0.25
NUP98-204ENST00000397004 A0A1B0GVM2 712 aa13.47□□□□□ -0.25
NUP98-204ENST00000397004 ADORA3P0DMS8 318 aa13.47□□□□□ -0.25
NUP98-204ENST00000397004 RRM2P31350 389 aa13.47□□□□□ -0.25
NUP98-204ENST00000397004 SERPINB10P48595 397 aa13.47□□□□□ -0.25
NUP98-204ENST00000397004 CYP4F2P78329 520 aa13.47□□□□□ -0.25
NUP98-204ENST00000397004 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.47□□□□□ -0.25
NUP98-204ENST00000397004 ZNF621Q6ZSS3 439 aa13.47□□□□□ -0.25
NUP98-204ENST00000397004 WDR53Q7Z5U6 358 aaPredicted RBP13.47□□□□□ -0.25
NUP98-204ENST00000397004 C11orf24Q96F05 449 aaPredicted RBP13.47□□□□□ -0.25
NUP98-204ENST00000397004 SAMD11Q96NU1 681 aa13.47□□□□□ -0.25
NUP98-204ENST00000397004 OR5M11Q96RB7 305 aa13.47□□□□□ -0.25
NUP98-204ENST00000397004 SLC32A1Q9H598 525 aa13.47□□□□□ -0.25
NUP98-204ENST00000397004 CWH43Q9H720 699 aa13.47□□□□□ -0.25
NUP98-204ENST00000397004 NDUFAF4Q9P032 175 aa13.47□□□□□ -0.25
NUP98-204ENST00000397004 SNX6Q9UNH7 406 aa13.47□□□□□ -0.25
NUP98-204ENST00000397004 EXO1Q9UQ84 846 aaKnown RBP13.47□□□□□ -0.25
NUP98-204ENST00000397004 SYN3O14994 580 aa13.46□□□□□ -0.25
NUP98-204ENST00000397004 PCDH7O60245 1069 aa13.46□□□□□ -0.25
NUP98-204ENST00000397004 FKBP9O95302 570 aa13.46□□□□□ -0.25
NUP98-204ENST00000397004 OPN1SWP03999 348 aa13.46□□□□□ -0.25
NUP98-204ENST00000397004 ITPKAP23677 461 aa13.46□□□□□ -0.25
NUP98-204ENST00000397004 PAX3P23760 479 aa13.46□□□□□ -0.25
NUP98-204ENST00000397004 HNRNPFP52597 415 aaKnown RBP13.46□□□□□ -0.25
NUP98-204ENST00000397004 TPRG1LQ5T0D9 272 aa13.46□□□□□ -0.25
NUP98-204ENST00000397004 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.46□□□□□ -0.25
NUP98-204ENST00000397004 CERS6Q6ZMG9 384 aa13.46□□□□□ -0.25
NUP98-204ENST00000397004 SLC24A5Q71RS6 500 aa13.46□□□□□ -0.25
NUP98-204ENST00000397004 SLC5A8Q8N695 610 aa13.46□□□□□ -0.25
NUP98-204ENST00000397004 CFAP20Q9Y6A4 193 aaKnown RBP13.46□□□□□ -0.25
NUP98-204ENST00000397004 A0A0C4DFX4 3053 aa13.46□□□□□ -0.25
NUP98-204ENST00000397004 LOC100506127A0A0U1RQW1 187 aa13.46□□□□□ -0.25
NUP98-204ENST00000397004 NPIPB15A6NHN6 443 aaPredicted RBP13.46□□□□□ -0.25
NUP98-204ENST00000397004 GREM1O60565 184 aa13.46□□□□□ -0.25
NUP98-204ENST00000397004 OR1E2P47887 323 aa13.46□□□□□ -0.25
NUP98-204ENST00000397004 SLC11A2P49281 568 aa13.46□□□□□ -0.25
NUP98-204ENST00000397004 DUOXA1Q1HG43 343 aa13.46□□□□□ -0.25
NUP98-204ENST00000397004 TCTN1Q2MV58 587 aa13.46□□□□□ -0.25
NUP98-204ENST00000397004 ADGRF1Q5T601 910 aa13.46□□□□□ -0.25
NUP98-204ENST00000397004 ANKS3Q6ZW76 656 aa13.46□□□□□ -0.25
NUP98-204ENST00000397004 OR52J3Q8NH60 311 aa13.46□□□□□ -0.25
NUP98-204ENST00000397004 EFHD2Q96C19 240 aaPredicted RBP13.46□□□□□ -0.25
NUP98-204ENST00000397004 MYO19Q96H55 970 aa13.46□□□□□ -0.25
NUP98-204ENST00000397004 EMILIN2Q9BXX0 1053 aa13.46□□□□□ -0.25
NUP98-204ENST00000397004 MMP27Q9H306 513 aa13.46□□□□□ -0.25
NUP98-204ENST00000397004 C14orf119Q9NWQ9 140 aa13.46□□□□□ -0.25
NUP98-204ENST00000397004 ARL15Q9NXU5 204 aa13.46□□□□□ -0.25
NUP98-204ENST00000397004 TESMINQ9Y4I5 508 aa13.46□□□□□ -0.25
NUP98-204ENST00000397004 UGT2A1Q9Y4X1 527 aa13.46□□□□□ -0.25
NUP98-204ENST00000397004 LYVE1Q9Y5Y7 322 aa13.46□□□□□ -0.25
NUP98-204ENST00000397004 ANAPC1Q9H1A4 1944 aa13.46□□□□□ -0.25
NUP98-204ENST00000397004 C1orf226A1L170 272 aa13.46□□□□□ -0.26
NUP98-204ENST00000397004 J3KTA2 159 aa13.46□□□□□ -0.26
NUP98-204ENST00000397004 CTDSP2O14595 271 aa13.46□□□□□ -0.26
NUP98-204ENST00000397004 SNPHO15079 494 aa13.46□□□□□ -0.26
NUP98-204ENST00000397004 PRPH2P23942 346 aa13.46□□□□□ -0.26
NUP98-204ENST00000397004 KIR3DL1P43629 444 aa13.46□□□□□ -0.26
NUP98-204ENST00000397004 SLC6A12P48065 614 aa13.46□□□□□ -0.26
NUP98-204ENST00000397004 SLC11A1P49279 550 aa13.46□□□□□ -0.26
NUP98-204ENST00000397004 MVDP53602 400 aa13.46□□□□□ -0.26
NUP98-204ENST00000397004 RHOAP61586 193 aa13.46□□□□□ -0.26
NUP98-204ENST00000397004 FAM26DQ5JW98 314 aa13.46□□□□□ -0.26
NUP98-204ENST00000397004 COX20Q5RI15 118 aa13.46□□□□□ -0.26
NUP98-204ENST00000397004 TET1Q8NFU7 2136 aa13.46□□□□□ -0.26
NUP98-204ENST00000397004 ADAMTS19Q8TE59 1207 aa13.46□□□□□ -0.26
NUP98-204ENST00000397004 SH3KBP1Q96B97 665 aa13.46□□□□□ -0.26
NUP98-204ENST00000397004 TMEM121BQ9BXQ6 578 aaPredicted RBP13.46□□□□□ -0.26
NUP98-204ENST00000397004 SLC29A3Q9BZD2 475 aa13.46□□□□□ -0.26
NUP98-204ENST00000397004 AGAP14A8MT82 685 aa13.45□□□□□ -0.26
NUP98-204ENST00000397004 CPSF4O95639 269 aaKnown RBP13.45□□□□□ -0.26
NUP98-204ENST00000397004 TRBC1P01850 177 aa13.45□□□□□ -0.26
NUP98-204ENST00000397004 CDK1P06493 297 aa13.45□□□□□ -0.26
NUP98-204ENST00000397004 CKBP12277 381 aa13.45□□□□□ -0.26
NUP98-204ENST00000397004 CSKP41240 450 aa13.45□□□□□ -0.26
NUP98-204ENST00000397004 CTSKP43235 329 aa13.45□□□□□ -0.26
NUP98-204ENST00000397004 CLK1P49759 484 aaKnown RBP13.45□□□□□ -0.26
NUP98-204ENST00000397004 DGKEP52429 567 aa13.45□□□□□ -0.26
NUP98-204ENST00000397004 TAF1CQ15572 869 aaPredicted RBP13.45□□□□□ -0.26
NUP98-204ENST00000397004 CCBE1Q6UXH8 406 aaPredicted RBP13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms