RNA–Protein interactions for RNA: ENST00000396629.6

SCFD1-202, Transcript of sec1 family domain containing 1, humanhuman

TSL 2 BASIC

Gene SCFD1, Length 2,021 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-202ENST00000396629 ANP32EQ9BTT0 268 aa7.95□□□□□ -1.14
SCFD1-202ENST00000396629 HEMGNQ9BXL5 484 aa7.95□□□□□ -1.14
SCFD1-202ENST00000396629 LIME1Q9H400 295 aa7.95□□□□□ -1.14
SCFD1-202ENST00000396629 TRIM45Q9H8W5 580 aaPredicted RBP7.95□□□□□ -1.14
SCFD1-202ENST00000396629 PLSCR2Q9NRY7 297 aa7.95□□□□□ -1.14
SCFD1-202ENST00000396629 SPATA7Q9P0W8 599 aa7.95□□□□□ -1.14
SCFD1-202ENST00000396629 LRFN1Q9P244 771 aa7.95□□□□□ -1.14
SCFD1-202ENST00000396629 MRFAP1Q9Y605 127 aa7.95□□□□□ -1.14
SCFD1-202ENST00000396629 ALG6Q9Y672 507 aa7.95□□□□□ -1.14
SCFD1-202ENST00000396629 SCN3AQ9NY46 2000 aa7.94□□□□□ -1.14
SCFD1-202ENST00000396629 IGKV1-8A0A0C4DH67 115 aa7.94□□□□□ -1.14
SCFD1-202ENST00000396629 A0A1B0GTH9 108 aa7.94□□□□□ -1.14
SCFD1-202ENST00000396629 KRT87PA6NCN2 255 aa7.94□□□□□ -1.14
SCFD1-202ENST00000396629 IQCF5A8MTL0 148 aa7.94□□□□□ -1.14
SCFD1-202ENST00000396629 TXNDC9O14530 226 aa7.94□□□□□ -1.14
SCFD1-202ENST00000396629 PROM1O43490 865 aa7.94□□□□□ -1.14
SCFD1-202ENST00000396629 CTAG2O75638 210 aa7.94□□□□□ -1.14
SCFD1-202ENST00000396629 TPOP07202 933 aa7.94□□□□□ -1.14
SCFD1-202ENST00000396629 ERGP11308 486 aa7.94□□□□□ -1.14
SCFD1-202ENST00000396629 BDKRB1P46663 353 aa7.94□□□□□ -1.14
SCFD1-202ENST00000396629 AGTR2P50052 363 aa7.94□□□□□ -1.14
SCFD1-202ENST00000396629 ADAM8P78325 824 aa7.94□□□□□ -1.14
SCFD1-202ENST00000396629 OC90Q02509 493 aaPredicted RBP7.94□□□□□ -1.14
SCFD1-202ENST00000396629 RELAQ04206 551 aa7.94□□□□□ -1.14
SCFD1-202ENST00000396629 MAPKAPK3Q16644 382 aa7.94□□□□□ -1.14
SCFD1-202ENST00000396629 ZNF468Q5VIY5 522 aaPredicted RBP7.94□□□□□ -1.14
SCFD1-202ENST00000396629 ZNF425Q6IV72 752 aa7.94□□□□□ -1.14
SCFD1-202ENST00000396629 ZNF227Q86WZ6 799 aa7.94□□□□□ -1.14
SCFD1-202ENST00000396629 CCDC50Q8IVM0 306 aa7.94□□□□□ -1.14
SCFD1-202ENST00000396629 CLYBLQ8N0X4 340 aa7.94□□□□□ -1.14
SCFD1-202ENST00000396629 SLC5A8Q8N695 610 aa7.94□□□□□ -1.14
SCFD1-202ENST00000396629 OR13J1Q8NGT2 312 aa7.94□□□□□ -1.14
SCFD1-202ENST00000396629 MBD6Q96DN6 1003 aa7.94□□□□□ -1.14
SCFD1-202ENST00000396629 ALPK1Q96QP1 1244 aa7.94□□□□□ -1.14
SCFD1-202ENST00000396629 TP63Q9H3D4 680 aaPredicted RBP7.94□□□□□ -1.14
SCFD1-202ENST00000396629 LRRC40Q9H9A6 602 aa7.94□□□□□ -1.14
SCFD1-202ENST00000396629 MRPS30Q9NP92 439 aaKnown RBP7.94□□□□□ -1.14
SCFD1-202ENST00000396629 NFS1Q9Y697 457 aa7.94□□□□□ -1.14
SCFD1-202ENST00000396629 FLNAP21333 2647 aaKnown RBP7.94□□□□□ -1.14
SCFD1-202ENST00000396629 FAM237BA0A1B0GVD1 139 aa7.93□□□□□ -1.14
SCFD1-202ENST00000396629 H0YIG0 161 aa7.93□□□□□ -1.14
SCFD1-202ENST00000396629 P2RX6O15547 441 aa7.93□□□□□ -1.14
SCFD1-202ENST00000396629 SLC25A12O75746 678 aa7.93□□□□□ -1.14
SCFD1-202ENST00000396629 GOT2P00505 430 aaKnown RBP7.93□□□□□ -1.14
SCFD1-202ENST00000396629 RBP3P10745 1247 aa7.93□□□□□ -1.14
SCFD1-202ENST00000396629 TFEBP19484 476 aa7.93□□□□□ -1.14
SCFD1-202ENST00000396629 DNASE1P24855 282 aa7.93□□□□□ -1.14
SCFD1-202ENST00000396629 CCNFP41002 786 aa7.93□□□□□ -1.14
SCFD1-202ENST00000396629 AVPR1BP47901 424 aa7.93□□□□□ -1.14
SCFD1-202ENST00000396629 MARCKSL1P49006 195 aa7.93□□□□□ -1.14
SCFD1-202ENST00000396629 HADHBP55084 474 aaKnown RBP7.93□□□□□ -1.14
SCFD1-202ENST00000396629 UBASH3AP57075 661 aa7.93□□□□□ -1.14
SCFD1-202ENST00000396629 EIF3EP60228 445 aaKnown RBP7.93□□□□□ -1.14
SCFD1-202ENST00000396629 SNRPNP63162 240 aaKnown RBP7.93□□□□□ -1.14
SCFD1-202ENST00000396629 PTK6Q13882 451 aa7.93□□□□□ -1.14
SCFD1-202ENST00000396629 TMED2Q15363 201 aa7.93□□□□□ -1.14
SCFD1-202ENST00000396629 NDUFA9Q16795 377 aa7.93□□□□□ -1.14
SCFD1-202ENST00000396629 PARP6Q2NL67 630 aa7.93□□□□□ -1.14
SCFD1-202ENST00000396629 DARS2Q6PI48 645 aaKnown RBP7.93□□□□□ -1.14
SCFD1-202ENST00000396629 AFTPHQ6ULP2 937 aa7.93□□□□□ -1.14
SCFD1-202ENST00000396629 PCGF5Q86SE9 256 aa7.93□□□□□ -1.14
SCFD1-202ENST00000396629 CCDC71Q8IV32 467 aaPredicted RBP7.93□□□□□ -1.14
SCFD1-202ENST00000396629 KRT222Q8N1A0 295 aa7.93□□□□□ -1.14
SCFD1-202ENST00000396629 POLDIP3Q9BY77 421 aaKnown RBP7.93□□□□□ -1.14
SCFD1-202ENST00000396629 CDCP1Q9H5V8 836 aa7.93□□□□□ -1.14
SCFD1-202ENST00000396629 RIMKLBQ9ULI2 386 aa7.93□□□□□ -1.14
SCFD1-202ENST00000396629 TTC7AQ9ULT0 858 aaPredicted RBP7.93□□□□□ -1.14
SCFD1-202ENST00000396629 EFR3BQ9Y2G0 817 aa7.93□□□□□ -1.14
SCFD1-202ENST00000396629 L3MBTL1Q9Y468 752 aa7.93□□□□□ -1.14
SCFD1-202ENST00000396629 USP27XA6NNY8 438 aa7.93□□□□□ -1.14
SCFD1-202ENST00000396629 AKR1B10O60218 316 aa7.93□□□□□ -1.14
SCFD1-202ENST00000396629 NSA2O95478 260 aaKnown RBP7.93□□□□□ -1.14
SCFD1-202ENST00000396629 PKMP14618 531 aaKnown RBP7.93□□□□□ -1.14
SCFD1-202ENST00000396629 EZRP15311 586 aaKnown RBP7.93□□□□□ -1.14
SCFD1-202ENST00000396629 PPARGP37231 505 aaPredicted RBP7.93□□□□□ -1.14
SCFD1-202ENST00000396629 DLX5P56178 289 aa7.93□□□□□ -1.14
SCFD1-202ENST00000396629 NUP107P57740 925 aa7.93□□□□□ -1.14
SCFD1-202ENST00000396629 COPS2P61201 443 aa7.93□□□□□ -1.14
SCFD1-202ENST00000396629 ACVR1Q04771 509 aa7.93□□□□□ -1.14
SCFD1-202ENST00000396629 SEMA3AQ14563 771 aa7.93□□□□□ -1.14
SCFD1-202ENST00000396629 EMC4Q5J8M3 183 aa7.93□□□□□ -1.14
SCFD1-202ENST00000396629 PAPD4Q6PIY7 484 aaKnown RBP7.93□□□□□ -1.14
SCFD1-202ENST00000396629 ACAD11Q709F0 780 aa7.93□□□□□ -1.14
SCFD1-202ENST00000396629 ZNF534Q76KX8 674 aa7.93□□□□□ -1.14
SCFD1-202ENST00000396629 SHISA5Q8N114 240 aa7.93□□□□□ -1.14
SCFD1-202ENST00000396629 RPRMLQ8N4K4 120 aa7.93□□□□□ -1.14
SCFD1-202ENST00000396629 PLPP5Q8NEB5 264 aa7.93□□□□□ -1.14
SCFD1-202ENST00000396629 MYRIPQ8NFW9 859 aa7.93□□□□□ -1.14
SCFD1-202ENST00000396629 OR4L1Q8NH43 312 aa7.93□□□□□ -1.14
SCFD1-202ENST00000396629 C16orf52Q8NHV5 167 aa7.93□□□□□ -1.14
SCFD1-202ENST00000396629 MAGEC3Q8TD91 643 aa7.93□□□□□ -1.14
SCFD1-202ENST00000396629 RERGQ96A58 199 aaPredicted RBP7.93□□□□□ -1.14
SCFD1-202ENST00000396629 SEC16BQ96JE7 1060 aa7.93□□□□□ -1.14
SCFD1-202ENST00000396629 DNAJC7Q99615 494 aa7.93□□□□□ -1.14
SCFD1-202ENST00000396629 MDFIQ99750 246 aa7.93□□□□□ -1.14
SCFD1-202ENST00000396629 ACAT2Q9BWD1 397 aa7.93□□□□□ -1.14
SCFD1-202ENST00000396629 SPTLC3Q9NUV7 552 aa7.93□□□□□ -1.14
SCFD1-202ENST00000396629 INTUQ9ULD6 942 aa7.93□□□□□ -1.14
SCFD1-202ENST00000396629 AKAP6Q13023 2319 aa7.92□□□□□ -1.14
SCFD1-202ENST00000396629 OR2W5A6NFC9 320 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms